RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 SRRM2Q9UQ35 2752 aaKnown RBP4.65□□□□□ -1.66
HTT-201ENST00000355072 HTTP42858 3142 aa4.65□□□□□ -1.67
HTT-201ENST00000355072 DMXL2Q8TDJ6 3036 aa4.64□□□□□ -1.67
HTT-201ENST00000355072 KRTAP11-1Q8IUC1 163 aa4.64□□□□□ -1.67
HTT-201ENST00000355072 VCANP13611 3396 aa4.63□□□□□ -1.67
HTT-201ENST00000355072 DMXL1Q9Y485 3027 aa4.62□□□□□ -1.67
HTT-201ENST00000355072 CRYBG3Q68DQ2 2970 aa4.61□□□□□ -1.67
HTT-201ENST00000355072 FREM2Q5SZK8 3169 aa4.6□□□□□ -1.67
HTT-201ENST00000355072 KRTAP1-1Q07627 177 aa4.6□□□□□ -1.67
HTT-201ENST00000355072 ZANQ9Y493 2812 aa4.6□□□□□ -1.67
HTT-201ENST00000355072 KRTAP1-3Q8IUG1 177 aa4.59□□□□□ -1.67
HTT-201ENST00000355072 KRTAP10-3P60369 221 aa4.59□□□□□ -1.67
HTT-201ENST00000355072 CELSR3Q9NYQ7 3312 aa4.57□□□□□ -1.68
HTT-201ENST00000355072 Q6ZRN7 208 aaPredicted RBP4.57□□□□□ -1.68
HTT-201ENST00000355072 ZFHX3Q15911 3703 aa4.56□□□□□ -1.68
HTT-201ENST00000355072 KRTAP13-1Q8IUC0 172 aa4.56□□□□□ -1.68
HTT-201ENST00000355072 MXRA5Q9NR99 2828 aa4.55□□□□□ -1.68
HTT-201ENST00000355072 DCHS2Q6V1P9 2916 aa4.55□□□□□ -1.68
HTT-201ENST00000355072 CELSR1Q9NYQ6 3014 aa4.55□□□□□ -1.68
HTT-201ENST00000355072 DNAH14Q0VDD8 3507 aa4.53□□□□□ -1.68
HTT-201ENST00000355072 COL6A3P12111 3177 aa4.53□□□□□ -1.68
HTT-201ENST00000355072 BRCA2P51587 3418 aa4.53□□□□□ -1.68
HTT-201ENST00000355072 CDH23Q9H251 3354 aa4.52□□□□□ -1.69
HTT-201ENST00000355072 HRNRQ86YZ3 2850 aaPredicted RBP4.52□□□□□ -1.69
HTT-201ENST00000355072 SMR3BP02814 79 aaPredicted RBP4.51□□□□□ -1.69
HTT-201ENST00000355072 Q5VSD8 79 aa4.49□□□□□ -1.69
HTT-201ENST00000355072 P0C880 135 aa4.48□□□□□ -1.69
HTT-201ENST00000355072 ATMQ13315 3056 aa4.48□□□□□ -1.69
HTT-201ENST00000355072 KRTAP1-5Q9BYS1 174 aa4.47□□□□□ -1.69
HTT-201ENST00000355072 TENM4Q6N022 2769 aa4.46□□□□□ -1.7
HTT-201ENST00000355072 CFAP47Q6ZTR5 3102 aa4.46□□□□□ -1.7
HTT-201ENST00000355072 FBN2P35556 2912 aa4.45□□□□□ -1.7
HTT-201ENST00000355072 VWFP04275 2813 aa4.41□□□□□ -1.7
HTT-201ENST00000355072 PRO2289Q9P1D8 64 aa4.41□□□□□ -1.7
HTT-201ENST00000355072 A8MU10 97 aa4.41□□□□□ -1.7
HTT-201ENST00000355072 C10orf95Q9H7T3 257 aa4.41□□□□□ -1.7
HTT-201ENST00000355072 H0YAA0 97 aa4.41□□□□□ -1.7
HTT-201ENST00000355072 PKD1L1Q8TDX9 2849 aa4.4□□□□□ -1.71
HTT-201ENST00000355072 TPRXLQ17RH7 258 aa4.38□□□□□ -1.71
HTT-201ENST00000355072 TENM2Q9NT68 2774 aa4.37□□□□□ -1.71
HTT-201ENST00000355072 INE1O15225 51 aa4.35□□□□□ -1.71
HTT-201ENST00000355072 KRTAP10-2P60368 255 aa4.29□□□□□ -1.72
HTT-201ENST00000355072 KRTAP10-1P60331 282 aa4.28□□□□□ -1.72
HTT-201ENST00000355072 KRTAP13-2Q52LG2 175 aa4.28□□□□□ -1.72
HTT-201ENST00000355072 COL7A1Q02388 2944 aa4.26□□□□□ -1.73
HTT-201ENST00000355072 EYSQ5T1H1 3165 aa4.26□□□□□ -1.73
HTT-201ENST00000355072 SPEGQ15772 3267 aa4.25□□□□□ -1.73
HTT-201ENST00000355072 KRTAP21-3Q3LHN1 58 aa4.25□□□□□ -1.73
HTT-201ENST00000355072 SZT2Q5T011 3432 aa4.24□□□□□ -1.73
HTT-201ENST00000355072 KRTAP7-1Q8IUC3 87 aa4.23□□□□□ -1.73
HTT-201ENST00000355072 KRTAP13-4Q3LI77 160 aa4.22□□□□□ -1.73
HTT-201ENST00000355072 KRTAP13-3Q3SY46 172 aa4.21□□□□□ -1.73
HTT-201ENST00000355072 LOC400499M0QZD8 3231 aa4.2□□□□□ -1.74
HTT-201ENST00000355072 XP32Q5T750 250 aa4.18□□□□□ -1.74
HTT-201ENST00000355072 KRTAP1-4P0C5Y4 121 aa4.17□□□□□ -1.74
HTT-201ENST00000355072 MYO15AQ9UKN7 3530 aa4.16□□□□□ -1.74
HTT-201ENST00000355072 KRTAP23-1A1A580 65 aa4.15□□□□□ -1.75
HTT-201ENST00000355072 WDFY3Q8IZQ1 3526 aa4.15□□□□□ -1.75
HTT-201ENST00000355072 MEGF8Q7Z7M0 2845 aa4.14□□□□□ -1.75
HTT-201ENST00000355072 ASPMQ8IZT6 3477 aa4.12□□□□□ -1.75
HTT-201ENST00000355072 SPTBN5Q9NRC6 3674 aaKnown RBP4.1□□□□□ -1.75
HTT-201ENST00000355072 FBN1P35555 2871 aaKnown RBP4.1□□□□□ -1.75
HTT-201ENST00000355072 KRTAP10-8P60410 259 aa4.09□□□□□ -1.76
HTT-201ENST00000355072 RELNP78509 3460 aa4.05□□□□□ -1.76
HTT-201ENST00000355072 DCHS1Q96JQ0 3298 aa4.03□□□□□ -1.76
HTT-201ENST00000355072 OTOGQ6ZRI0 2925 aa4.02□□□□□ -1.77
HTT-201ENST00000355072 LAMA5O15230 3695 aa4.01□□□□□ -1.77
HTT-201ENST00000355072 NBPF19A0A087WUL8 3843 aa4.01□□□□□ -1.77
HTT-201ENST00000355072 KRTAP12-1P59990 96 aa4□□□□□ -1.77
HTT-201ENST00000355072 ZFHX4Q86UP3 3567 aa3.97□□□□□ -1.77
HTT-201ENST00000355072 KRTAP12-2P59991 146 aa3.97□□□□□ -1.77
HTT-201ENST00000355072 KRTAP15-1Q3LI76 137 aa3.97□□□□□ -1.77
HTT-201ENST00000355072 SPENQ96T58 3664 aaKnown RBP3.97□□□□□ -1.77
HTT-201ENST00000355072 FBN3Q75N90 2809 aa3.94□□□□□ -1.78
HTT-201ENST00000355072 DMDP11532 3685 aa3.9□□□□□ -1.79
HTT-201ENST00000355072 SMG1Q96Q15 3661 aaKnown RBP3.86□□□□□ -1.79
HTT-201ENST00000355072 MUC3AQ02505 3323 aa3.86□□□□□ -1.79
HTT-201ENST00000355072 AKAP9Q99996 3911 aa3.84□□□□□ -1.79
HTT-201ENST00000355072 KRTAP10-10P60014 251 aa3.83□□□□□ -1.8
HTT-201ENST00000355072 CSMD1Q96PZ7 3565 aa3.83□□□□□ -1.8
HTT-201ENST00000355072 KRTAP19-4Q3LI73 84 aa3.81□□□□□ -1.8
HTT-201ENST00000355072 KRTAP10-6P60371 365 aaPredicted RBP3.78□□□□□ -1.8
HTT-201ENST00000355072 CUBNO60494 3623 aa3.77□□□□□ -1.81
HTT-201ENST00000355072 SVEP1Q4LDE5 3571 aa3.71□□□□□ -1.82
HTT-201ENST00000355072 VPS13CQ709C8 3753 aa3.7□□□□□ -1.82
HTT-201ENST00000355072 KRTAP10-12P60413 245 aa3.69□□□□□ -1.82
HTT-201ENST00000355072 A0A1B0GVY2 172 aa3.69□□□□□ -1.82
HTT-201ENST00000355072 KRTAP3-1Q9BYR8 98 aa3.68□□□□□ -1.82
HTT-201ENST00000355072 TRRAPQ9Y4A5 3859 aa3.68□□□□□ -1.82
HTT-201ENST00000355072 CSMD2Q7Z408 3487 aa3.66□□□□□ -1.82
HTT-201ENST00000355072 BSNQ9UPA5 3926 aa3.64□□□□□ -1.83
HTT-201ENST00000355072 KRTAP12-3P60328 96 aa3.56□□□□□ -1.84
HTT-201ENST00000355072 KRTAP3-2Q9BYR7 98 aa3.56□□□□□ -1.84
HTT-201ENST00000355072 CMYA5Q8N3K9 4069 aa3.54□□□□□ -1.84
HTT-201ENST00000355072 KRTAP3-3Q9BYR6 98 aa3.54□□□□□ -1.84
HTT-201ENST00000355072 ALMS1Q8TCU4 4167 aa3.53□□□□□ -1.84
HTT-201ENST00000355072 LYSTQ99698 3801 aa3.5□□□□□ -1.85
HTT-201ENST00000355072 DNAH3Q8TD57 4116 aa3.5□□□□□ -1.85
HTT-201ENST00000355072 ZNF469Q96JG9 3925 aaPredicted RBP3.47□□□□□ -1.85
HTT-201ENST00000355072 DNAH1Q9P2D7 4330 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms