RNA–Protein interactions for RNA: ENST00000353383.5

RAI1-201, Transcript of retinoic acid induced 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RAI1, Length 7,662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1-201ENST00000353383 COL12A1Q99715 3063 aa9.64□□□□□ -0.87
RAI1-201ENST00000353383 LAMA1P25391 3075 aa9.63□□□□□ -0.87
RAI1-201ENST00000353383 FRYLO94915 3013 aa9.59□□□□□ -0.87
RAI1-201ENST00000353383 UBR5O95071 2799 aaPredicted RBP9.59□□□□□ -0.88
RAI1-201ENST00000353383 UTP20O75691 2785 aaKnown RBP9.58□□□□□ -0.88
RAI1-201ENST00000353383 RPS29P62273 56 aaKnown RBP9.57□□□□□ -0.88
RAI1-201ENST00000353383 USP34Q70CQ2 3546 aa9.55□□□□□ -0.88
RAI1-201ENST00000353383 KRTAP13-2Q52LG2 175 aa9.52□□□□□ -0.89
RAI1-201ENST00000353383 BOD1L1Q8NFC6 3051 aa9.52□□□□□ -0.89
RAI1-201ENST00000353383 ATMQ13315 3056 aa9.49□□□□□ -0.89
RAI1-201ENST00000353383 HIVEP1P15822 2718 aa9.46□□□□□ -0.9
RAI1-201ENST00000353383 A6NN06 94 aa9.44□□□□□ -0.9
RAI1-201ENST00000353383 ITPR1Q14643 2758 aa9.44□□□□□ -0.9
RAI1-201ENST00000353383 Q6ZRN7 208 aaPredicted RBP9.43□□□□□ -0.9
RAI1-201ENST00000353383 ZZEF1O43149 2961 aa9.43□□□□□ -0.9
RAI1-201ENST00000353383 TACC2O95359 2948 aa9.41□□□□□ -0.9
RAI1-201ENST00000353383 CHD9Q3L8U1 2897 aa9.38□□□□□ -0.91
RAI1-201ENST00000353383 ADGRG4Q8IZF6 3080 aa9.36□□□□□ -0.91
RAI1-201ENST00000353383 KRTAP10-10P60014 251 aa9.36□□□□□ -0.91
RAI1-201ENST00000353383 KRTAP7-1Q8IUC3 87 aa9.32□□□□□ -0.92
RAI1-201ENST00000353383 P0C880 135 aa9.29□□□□□ -0.92
RAI1-201ENST00000353383 CELSR2Q9HCU4 2923 aa9.27□□□□□ -0.92
RAI1-201ENST00000353383 SPTBN5Q9NRC6 3674 aaKnown RBP9.25□□□□□ -0.93
RAI1-201ENST00000353383 ASPMQ8IZT6 3477 aa9.25□□□□□ -0.93
RAI1-201ENST00000353383 PRO2289Q9P1D8 64 aa9.24□□□□□ -0.93
RAI1-201ENST00000353383 TENM1Q9UKZ4 2725 aa9.22□□□□□ -0.93
RAI1-201ENST00000353383 PP632Q6XCG6 107 aa9.22□□□□□ -0.93
RAI1-201ENST00000353383 FLNCQ14315 2725 aa9.21□□□□□ -0.93
RAI1-201ENST00000353383 KRTAP13-1Q8IUC0 172 aa9.21□□□□□ -0.94
RAI1-201ENST00000353383 EYSQ5T1H1 3165 aa9.19□□□□□ -0.94
RAI1-201ENST00000353383 XP32Q5T750 250 aa9.18□□□□□ -0.94
RAI1-201ENST00000353383 WDFY3Q8IZQ1 3526 aa9.17□□□□□ -0.94
RAI1-201ENST00000353383 MYO15AQ9UKN7 3530 aa9.16□□□□□ -0.94
RAI1-201ENST00000353383 NBEAQ8NFP9 2946 aa9.14□□□□□ -0.95
RAI1-201ENST00000353383 TNRC18O15417 2968 aaPredicted RBP9.13□□□□□ -0.95
RAI1-201ENST00000353383 DMXL1Q9Y485 3027 aa9.12□□□□□ -0.95
RAI1-201ENST00000353383 LOC400499M0QZD8 3231 aa9.12□□□□□ -0.95
RAI1-201ENST00000353383 CELSR1Q9NYQ6 3014 aa9.09□□□□□ -0.95
RAI1-201ENST00000353383 ZFHX4Q86UP3 3567 aa9.07□□□□□ -0.96
RAI1-201ENST00000353383 NF1P21359 2839 aa9.07□□□□□ -0.96
RAI1-201ENST00000353383 NBPF19A0A087WUL8 3843 aa9.06□□□□□ -0.96
RAI1-201ENST00000353383 DCHS2Q6V1P9 2916 aa9.02□□□□□ -0.97
RAI1-201ENST00000353383 H0YAA0 97 aa8.99□□□□□ -0.97
RAI1-201ENST00000353383 TENM4Q6N022 2769 aa8.98□□□□□ -0.97
RAI1-201ENST00000353383 DCHS1Q96JQ0 3298 aa8.95□□□□□ -0.98
RAI1-201ENST00000353383 TPRXLQ17RH7 258 aa8.94□□□□□ -0.98
RAI1-201ENST00000353383 NIPBLQ6KC79 2804 aaeCLIP8.91□□□□□ -0.98
RAI1-201ENST00000353383 TENM3Q9P273 2699 aa8.91□□□□□ -0.98
RAI1-201ENST00000353383 KRTAP21-3Q3LHN1 58 aa8.89□□□□□ -0.99
RAI1-201ENST00000353383 LAMA5O15230 3695 aa8.87□□□□□ -0.99
RAI1-201ENST00000353383 KRTAP1-4P0C5Y4 121 aa8.86□□□□□ -0.99
RAI1-201ENST00000353383 TGP01266 2768 aa8.82□□□□□ -1
RAI1-201ENST00000353383 PDZD2O15018 2839 aa8.8□□□□□ -1
RAI1-201ENST00000353383 PKD1L1Q8TDX9 2849 aa8.78□□□□□ -1
RAI1-201ENST00000353383 VWFP04275 2813 aa8.77□□□□□ -1.01
RAI1-201ENST00000353383 FBN2P35556 2912 aa8.76□□□□□ -1.01
RAI1-201ENST00000353383 KRTAP13-3Q3SY46 172 aa8.71□□□□□ -1.01
RAI1-201ENST00000353383 ZANQ9Y493 2812 aa8.68□□□□□ -1.02
RAI1-201ENST00000353383 CSMD1Q96PZ7 3565 aa8.68□□□□□ -1.02
RAI1-201ENST00000353383 KRTAP12-2P59991 146 aa8.64□□□□□ -1.03
RAI1-201ENST00000353383 TENM2Q9NT68 2774 aa8.63□□□□□ -1.03
RAI1-201ENST00000353383 RELNP78509 3460 aa8.59□□□□□ -1.03
RAI1-201ENST00000353383 ZFHX3Q15911 3703 aa8.53□□□□□ -1.04
RAI1-201ENST00000353383 KRTAP15-1Q3LI76 137 aa8.47□□□□□ -1.05
RAI1-201ENST00000353383 SPENQ96T58 3664 aaKnown RBP8.47□□□□□ -1.05
RAI1-201ENST00000353383 SMG1Q96Q15 3661 aaKnown RBP8.45□□□□□ -1.06
RAI1-201ENST00000353383 CRCT1Q9UGL9 99 aa8.41□□□□□ -1.06
RAI1-201ENST00000353383 MXRA5Q9NR99 2828 aa8.41□□□□□ -1.06
RAI1-201ENST00000353383 KRTAP13-4Q3LI77 160 aa8.4□□□□□ -1.06
RAI1-201ENST00000353383 HRNRQ86YZ3 2850 aaPredicted RBP8.38□□□□□ -1.07
RAI1-201ENST00000353383 CUBNO60494 3623 aa8.33□□□□□ -1.08
RAI1-201ENST00000353383 KRTAP12-1P59990 96 aa8.26□□□□□ -1.09
RAI1-201ENST00000353383 DMDP11532 3685 aa8.26□□□□□ -1.09
RAI1-201ENST00000353383 COL7A1Q02388 2944 aa8.23□□□□□ -1.09
RAI1-201ENST00000353383 SRRM2Q9UQ35 2752 aaKnown RBP8.22□□□□□ -1.09
RAI1-201ENST00000353383 SVEP1Q4LDE5 3571 aa8.15□□□□□ -1.11
RAI1-201ENST00000353383 MEGF8Q7Z7M0 2845 aa8.15□□□□□ -1.11
RAI1-201ENST00000353383 MUC3AQ02505 3323 aa8.07□□□□□ -1.12
RAI1-201ENST00000353383 FBN3Q75N90 2809 aa7.92□□□□□ -1.14
RAI1-201ENST00000353383 TRRAPQ9Y4A5 3859 aa7.91□□□□□ -1.14
RAI1-201ENST00000353383 CSMD2Q7Z408 3487 aa7.9□□□□□ -1.14
RAI1-201ENST00000353383 KRTAP3-1Q9BYR8 98 aa7.9□□□□□ -1.14
RAI1-201ENST00000353383 FBN1P35555 2871 aaKnown RBP7.9□□□□□ -1.14
RAI1-201ENST00000353383 KRTAP10-12P60413 245 aa7.89□□□□□ -1.15
RAI1-201ENST00000353383 CSMD3Q7Z407 3707 aa7.86□□□□□ -1.15
RAI1-201ENST00000353383 VPS13CQ709C8 3753 aa7.85□□□□□ -1.15
RAI1-201ENST00000353383 INE1O15225 51 aa7.75□□□□□ -1.17
RAI1-201ENST00000353383 KRTAP10-6P60371 365 aaPredicted RBP7.7□□□□□ -1.18
RAI1-201ENST00000353383 OTOGQ6ZRI0 2925 aa7.62□□□□□ -1.19
RAI1-201ENST00000353383 KRTAP10-5P60370 271 aa7.59□□□□□ -1.19
RAI1-201ENST00000353383 KRTAP12-3P60328 96 aa7.59□□□□□ -1.2
RAI1-201ENST00000353383 LORP23490 312 aaPredicted RBP7.5□□□□□ -1.21
RAI1-201ENST00000353383 BSNQ9UPA5 3926 aa7.5□□□□□ -1.21
RAI1-201ENST00000353383 LCE3AQ5TA76 89 aa7.49□□□□□ -1.21
RAI1-201ENST00000353383 KRTAP4-5Q9BYR2 181 aa7.46□□□□□ -1.22
RAI1-201ENST00000353383 KRTAP8-1Q8IUC2 63 aa7.44□□□□□ -1.22
RAI1-201ENST00000353383 MT1HL1P0DM35 61 aa7.44□□□□□ -1.22
RAI1-201ENST00000353383 ANK3Q12955 4377 aaKnown RBP7.4□□□□□ -1.22
RAI1-201ENST00000353383 KRTAP3-3Q9BYR6 98 aa7.36□□□□□ -1.23
RAI1-201ENST00000353383 KRTAP3-2Q9BYR7 98 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms