RNA–Protein interactions for RNA: ENST00000346085.9

ARID1B-202, Transcript of AT-rich interaction domain 1B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARID1B, Length 10,194 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1B-202ENST00000346085 CRYBG3Q68DQ2 2970 aa9.38□□□□□ -0.91
ARID1B-202ENST00000346085 MKI67P46013 3256 aaKnown RBP9.37□□□□□ -0.91
ARID1B-202ENST00000346085 KRTAP10-2P60368 255 aa9.37□□□□□ -0.91
ARID1B-202ENST00000346085 KRTAP1-3Q8IUG1 177 aa9.36□□□□□ -0.91
ARID1B-202ENST00000346085 TENM1Q9UKZ4 2725 aa9.34□□□□□ -0.91
ARID1B-202ENST00000346085 CELSR3Q9NYQ7 3312 aa9.33□□□□□ -0.92
ARID1B-202ENST00000346085 KRTAP1-1Q07627 177 aa9.33□□□□□ -0.92
ARID1B-202ENST00000346085 KRTAP13-1Q8IUC0 172 aa9.32□□□□□ -0.92
ARID1B-202ENST00000346085 PRUNE2Q8WUY3 3088 aa9.3□□□□□ -0.92
ARID1B-202ENST00000346085 COL12A1Q99715 3063 aa9.29□□□□□ -0.92
ARID1B-202ENST00000346085 WDFY4Q6ZS81 3184 aa9.28□□□□□ -0.92
ARID1B-202ENST00000346085 KRTAP13-2Q52LG2 175 aa9.26□□□□□ -0.93
ARID1B-202ENST00000346085 ZANQ9Y493 2812 aa9.25□□□□□ -0.93
ARID1B-202ENST00000346085 PRO2289Q9P1D8 64 aa9.23□□□□□ -0.93
ARID1B-202ENST00000346085 RANBP2P49792 3224 aaKnown RBP9.23□□□□□ -0.93
ARID1B-202ENST00000346085 BRCA2P51587 3418 aa9.19□□□□□ -0.94
ARID1B-202ENST00000346085 DMXL2Q8TDJ6 3036 aa9.16□□□□□ -0.94
ARID1B-202ENST00000346085 LAMA3Q16787 3333 aa9.16□□□□□ -0.94
ARID1B-202ENST00000346085 ZZEF1O43149 2961 aa9.15□□□□□ -0.94
ARID1B-202ENST00000346085 KRTAP7-1Q8IUC3 87 aa9.14□□□□□ -0.95
ARID1B-202ENST00000346085 HTTP42858 3142 aa9.13□□□□□ -0.95
ARID1B-202ENST00000346085 REV3LO60673 3130 aa9.12□□□□□ -0.95
ARID1B-202ENST00000346085 TNRC18O15417 2968 aaPredicted RBP9.11□□□□□ -0.95
ARID1B-202ENST00000346085 DNAH14Q0VDD8 3507 aa9.07□□□□□ -0.96
ARID1B-202ENST00000346085 KRTAP13-4Q3LI77 160 aa9.05□□□□□ -0.96
ARID1B-202ENST00000346085 KRTAP12-2P59991 146 aa9.04□□□□□ -0.96
ARID1B-202ENST00000346085 DCHS2Q6V1P9 2916 aa9.02□□□□□ -0.97
ARID1B-202ENST00000346085 FBN2P35556 2912 aa9□□□□□ -0.97
ARID1B-202ENST00000346085 UNC80Q8N2C7 3258 aa8.99□□□□□ -0.97
ARID1B-202ENST00000346085 TPRXLQ17RH7 258 aa8.97□□□□□ -0.97
ARID1B-202ENST00000346085 LAMA1P25391 3075 aa8.96□□□□□ -0.98
ARID1B-202ENST00000346085 COL6A3P12111 3177 aa8.94□□□□□ -0.98
ARID1B-202ENST00000346085 CDH23Q9H251 3354 aa8.91□□□□□ -0.98
ARID1B-202ENST00000346085 ZFHX3Q15911 3703 aa8.91□□□□□ -0.98
ARID1B-202ENST00000346085 VCANP13611 3396 aa8.91□□□□□ -0.98
ARID1B-202ENST00000346085 CFAP47Q6ZTR5 3102 aa8.89□□□□□ -0.99
ARID1B-202ENST00000346085 KRTAP15-1Q3LI76 137 aa8.88□□□□□ -0.99
ARID1B-202ENST00000346085 MXRA5Q9NR99 2828 aa8.86□□□□□ -0.99
ARID1B-202ENST00000346085 XP32Q5T750 250 aa8.85□□□□□ -0.99
ARID1B-202ENST00000346085 DMXL1Q9Y485 3027 aa8.83□□□□□ -1
ARID1B-202ENST00000346085 HRNRQ86YZ3 2850 aaPredicted RBP8.83□□□□□ -1
ARID1B-202ENST00000346085 SPEGQ15772 3267 aa8.81□□□□□ -1
ARID1B-202ENST00000346085 VWFP04275 2813 aa8.78□□□□□ -1
ARID1B-202ENST00000346085 BOD1L1Q8NFC6 3051 aa8.77□□□□□ -1.01
ARID1B-202ENST00000346085 TENM2Q9NT68 2774 aa8.75□□□□□ -1.01
ARID1B-202ENST00000346085 KRTAP12-1P59990 96 aa8.75□□□□□ -1.01
ARID1B-202ENST00000346085 CELSR1Q9NYQ6 3014 aa8.74□□□□□ -1.01
ARID1B-202ENST00000346085 KRTAP23-1A1A580 65 aa8.73□□□□□ -1.01
ARID1B-202ENST00000346085 ATMQ13315 3056 aa8.73□□□□□ -1.01
ARID1B-202ENST00000346085 USP34Q70CQ2 3546 aa8.72□□□□□ -1.01
ARID1B-202ENST00000346085 ADGRG4Q8IZF6 3080 aa8.71□□□□□ -1.02
ARID1B-202ENST00000346085 KRTAP10-10P60014 251 aa8.68□□□□□ -1.02
ARID1B-202ENST00000346085 A0A1B0GVY2 172 aa8.67□□□□□ -1.02
ARID1B-202ENST00000346085 KRTAP13-3Q3SY46 172 aa8.67□□□□□ -1.02
ARID1B-202ENST00000346085 TENM4Q6N022 2769 aa8.66□□□□□ -1.02
ARID1B-202ENST00000346085 SZT2Q5T011 3432 aa8.65□□□□□ -1.02
ARID1B-202ENST00000346085 SPTBN5Q9NRC6 3674 aaKnown RBP8.65□□□□□ -1.03
ARID1B-202ENST00000346085 PKD1L1Q8TDX9 2849 aa8.64□□□□□ -1.03
ARID1B-202ENST00000346085 KRTAP1-4P0C5Y4 121 aa8.55□□□□□ -1.04
ARID1B-202ENST00000346085 COL7A1Q02388 2944 aa8.44□□□□□ -1.06
ARID1B-202ENST00000346085 EYSQ5T1H1 3165 aa8.43□□□□□ -1.06
ARID1B-202ENST00000346085 WDFY3Q8IZQ1 3526 aa8.41□□□□□ -1.06
ARID1B-202ENST00000346085 OTOGQ6ZRI0 2925 aa8.37□□□□□ -1.07
ARID1B-202ENST00000346085 MYO15AQ9UKN7 3530 aa8.34□□□□□ -1.08
ARID1B-202ENST00000346085 MEGF8Q7Z7M0 2845 aa8.28□□□□□ -1.08
ARID1B-202ENST00000346085 ASPMQ8IZT6 3477 aa8.25□□□□□ -1.09
ARID1B-202ENST00000346085 NBPF19A0A087WUL8 3843 aa8.25□□□□□ -1.09
ARID1B-202ENST00000346085 ZFHX4Q86UP3 3567 aa8.22□□□□□ -1.09
ARID1B-202ENST00000346085 KRTAP10-6P60371 365 aaPredicted RBP8.13□□□□□ -1.11
ARID1B-202ENST00000346085 LOC400499M0QZD8 3231 aa8.13□□□□□ -1.11
ARID1B-202ENST00000346085 FBN1P35555 2871 aaKnown RBP8.1□□□□□ -1.11
ARID1B-202ENST00000346085 LAMA5O15230 3695 aa8.09□□□□□ -1.11
ARID1B-202ENST00000346085 FBN3Q75N90 2809 aa8.06□□□□□ -1.12
ARID1B-202ENST00000346085 KRTAP3-1Q9BYR8 98 aa8.03□□□□□ -1.12
ARID1B-202ENST00000346085 KRTAP10-12P60413 245 aa7.96□□□□□ -1.14
ARID1B-202ENST00000346085 SMG1Q96Q15 3661 aaKnown RBP7.92□□□□□ -1.14
ARID1B-202ENST00000346085 SPENQ96T58 3664 aaKnown RBP7.88□□□□□ -1.15
ARID1B-202ENST00000346085 CSMD1Q96PZ7 3565 aa7.87□□□□□ -1.15
ARID1B-202ENST00000346085 DMDP11532 3685 aa7.86□□□□□ -1.15
ARID1B-202ENST00000346085 RELNP78509 3460 aa7.85□□□□□ -1.15
ARID1B-202ENST00000346085 KRTAP12-3P60328 96 aa7.8□□□□□ -1.16
ARID1B-202ENST00000346085 DCHS1Q96JQ0 3298 aa7.78□□□□□ -1.16
ARID1B-202ENST00000346085 CRCT1Q9UGL9 99 aa7.74□□□□□ -1.17
ARID1B-202ENST00000346085 KRTAP3-2Q9BYR7 98 aa7.67□□□□□ -1.18
ARID1B-202ENST00000346085 KRTAP10-5P60370 271 aa7.64□□□□□ -1.19
ARID1B-202ENST00000346085 ALMS1Q8TCU4 4167 aa7.62□□□□□ -1.19
ARID1B-202ENST00000346085 KRTAP21-3Q3LHN1 58 aa7.61□□□□□ -1.19
ARID1B-202ENST00000346085 CUBNO60494 3623 aa7.6□□□□□ -1.19
ARID1B-202ENST00000346085 VPS13CQ709C8 3753 aa7.54□□□□□ -1.2
ARID1B-202ENST00000346085 KRTAP3-3Q9BYR6 98 aa7.52□□□□□ -1.21
ARID1B-202ENST00000346085 LCE3AQ5TA76 89 aa7.49□□□□□ -1.21
ARID1B-202ENST00000346085 SVEP1Q4LDE5 3571 aa7.48□□□□□ -1.21
ARID1B-202ENST00000346085 TRRAPQ9Y4A5 3859 aa7.36□□□□□ -1.23
ARID1B-202ENST00000346085 AKAP9Q99996 3911 aa7.33□□□□□ -1.24
ARID1B-202ENST00000346085 BSNQ9UPA5 3926 aa7.33□□□□□ -1.24
ARID1B-202ENST00000346085 CSMD3Q7Z407 3707 aa7.25□□□□□ -1.25
ARID1B-202ENST00000346085 MUC3AQ02505 3323 aa7.16□□□□□ -1.26
ARID1B-202ENST00000346085 CSMD2Q7Z408 3487 aa7.09□□□□□ -1.27
ARID1B-202ENST00000346085 KRTAP8-1Q8IUC2 63 aa6.89□□□□□ -1.31
ARID1B-202ENST00000346085 ZNF469Q96JG9 3925 aaPredicted RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms