RNA–Protein interactions for RNA: ENST00000343348.10

SEMA6A-202, Transcript of semaphorin 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA6A, Length 6,878 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-202ENST00000343348 ZNF292O60281 2723 aa6.64□□□□□ -1.35
SEMA6A-202ENST00000343348 ITPR2Q14571 2701 aa6.63□□□□□ -1.35
SEMA6A-202ENST00000343348 A0A1B0GVY2 172 aa6.62□□□□□ -1.35
SEMA6A-202ENST00000343348 BOD1L1Q8NFC6 3051 aa6.62□□□□□ -1.35
SEMA6A-202ENST00000343348 BAHCC1Q9P281 2608 aa6.62□□□□□ -1.35
SEMA6A-202ENST00000343348 FRYLO94915 3013 aa6.61□□□□□ -1.35
SEMA6A-202ENST00000343348 NBEAQ8NFP9 2946 aa6.61□□□□□ -1.35
SEMA6A-202ENST00000343348 ITPR1Q14643 2758 aa6.6□□□□□ -1.35
SEMA6A-202ENST00000343348 NSD1Q96L73 2696 aaPredicted RBP6.58□□□□□ -1.36
SEMA6A-202ENST00000343348 COL12A1Q99715 3063 aa6.58□□□□□ -1.36
SEMA6A-202ENST00000343348 KRTAP10-8P60410 259 aa6.58□□□□□ -1.36
SEMA6A-202ENST00000343348 UBR5O95071 2799 aaPredicted RBP6.57□□□□□ -1.36
SEMA6A-202ENST00000343348 TACC2O95359 2948 aa6.55□□□□□ -1.36
SEMA6A-202ENST00000343348 ADGRG4Q8IZF6 3080 aa6.54□□□□□ -1.36
SEMA6A-202ENST00000343348 HIVEP1P15822 2718 aa6.53□□□□□ -1.36
SEMA6A-202ENST00000343348 UTP20O75691 2785 aaKnown RBP6.53□□□□□ -1.36
SEMA6A-202ENST00000343348 H0YAA0 97 aa6.52□□□□□ -1.37
SEMA6A-202ENST00000343348 ATMQ13315 3056 aa6.49□□□□□ -1.37
SEMA6A-202ENST00000343348 USP34Q70CQ2 3546 aa6.48□□□□□ -1.37
SEMA6A-202ENST00000343348 KMT2BQ9UMN6 2715 aaPredicted RBP6.45□□□□□ -1.38
SEMA6A-202ENST00000343348 ZZEF1O43149 2961 aa6.44□□□□□ -1.38
SEMA6A-202ENST00000343348 P0C880 135 aa6.43□□□□□ -1.38
SEMA6A-202ENST00000343348 IGSF10Q6WRI0 2623 aa6.42□□□□□ -1.38
SEMA6A-202ENST00000343348 PP632Q6XCG6 107 aa6.41□□□□□ -1.38
SEMA6A-202ENST00000343348 XP32Q5T750 250 aa6.41□□□□□ -1.38
SEMA6A-202ENST00000343348 SPTBN5Q9NRC6 3674 aaKnown RBP6.41□□□□□ -1.38
SEMA6A-202ENST00000343348 MYO15AQ9UKN7 3530 aa6.38□□□□□ -1.39
SEMA6A-202ENST00000343348 CELSR2Q9HCU4 2923 aa6.37□□□□□ -1.39
SEMA6A-202ENST00000343348 WDFY3Q8IZQ1 3526 aa6.36□□□□□ -1.39
SEMA6A-202ENST00000343348 DCHS1Q96JQ0 3298 aa6.35□□□□□ -1.39
SEMA6A-202ENST00000343348 EYSQ5T1H1 3165 aa6.34□□□□□ -1.39
SEMA6A-202ENST00000343348 DMXL1Q9Y485 3027 aa6.34□□□□□ -1.39
SEMA6A-202ENST00000343348 KRTAP1-4P0C5Y4 121 aa6.34□□□□□ -1.4
SEMA6A-202ENST00000343348 KRTAP10-10P60014 251 aa6.31□□□□□ -1.4
SEMA6A-202ENST00000343348 LOC400499M0QZD8 3231 aa6.3□□□□□ -1.4
SEMA6A-202ENST00000343348 TNRC18O15417 2968 aaPredicted RBP6.3□□□□□ -1.4
SEMA6A-202ENST00000343348 ASPMQ8IZT6 3477 aa6.29□□□□□ -1.4
SEMA6A-202ENST00000343348 DCHS2Q6V1P9 2916 aa6.23□□□□□ -1.41
SEMA6A-202ENST00000343348 CSMD1Q96PZ7 3565 aa6.17□□□□□ -1.42
SEMA6A-202ENST00000343348 KRTAP12-2P59991 146 aa6.16□□□□□ -1.42
SEMA6A-202ENST00000343348 PRO2289Q9P1D8 64 aa6.15□□□□□ -1.42
SEMA6A-202ENST00000343348 TPRXLQ17RH7 258 aa6.14□□□□□ -1.43
SEMA6A-202ENST00000343348 CELSR1Q9NYQ6 3014 aa6.14□□□□□ -1.43
SEMA6A-202ENST00000343348 FLNCQ14315 2725 aa6.13□□□□□ -1.43
SEMA6A-202ENST00000343348 TGP01266 2768 aa6.12□□□□□ -1.43
SEMA6A-202ENST00000343348 FBN2P35556 2912 aa6.12□□□□□ -1.43
SEMA6A-202ENST00000343348 KRTAP13-3Q3SY46 172 aa6.11□□□□□ -1.43
SEMA6A-202ENST00000343348 TENM1Q9UKZ4 2725 aa6.09□□□□□ -1.43
SEMA6A-202ENST00000343348 ZFHX4Q86UP3 3567 aa6.09□□□□□ -1.43
SEMA6A-202ENST00000343348 LAMA5O15230 3695 aa6.09□□□□□ -1.43
SEMA6A-202ENST00000343348 TENM4Q6N022 2769 aa6.06□□□□□ -1.44
SEMA6A-202ENST00000343348 ZANQ9Y493 2812 aa6.06□□□□□ -1.44
SEMA6A-202ENST00000343348 NF1P21359 2839 aa6.04□□□□□ -1.44
SEMA6A-202ENST00000343348 RELNP78509 3460 aa6.03□□□□□ -1.44
SEMA6A-202ENST00000343348 HRNRQ86YZ3 2850 aaPredicted RBP6.02□□□□□ -1.45
SEMA6A-202ENST00000343348 NIPBLQ6KC79 2804 aaeCLIP6.01□□□□□ -1.45
SEMA6A-202ENST00000343348 NBPF19A0A087WUL8 3843 aa6□□□□□ -1.45
SEMA6A-202ENST00000343348 KRTAP12-1P59990 96 aa5.95□□□□□ -1.46
SEMA6A-202ENST00000343348 KRTAP13-4Q3LI77 160 aa5.94□□□□□ -1.46
SEMA6A-202ENST00000343348 KRTAP21-3Q3LHN1 58 aa5.93□□□□□ -1.46
SEMA6A-202ENST00000343348 TENM2Q9NT68 2774 aa5.92□□□□□ -1.46
SEMA6A-202ENST00000343348 TENM3Q9P273 2699 aa5.9□□□□□ -1.47
SEMA6A-202ENST00000343348 PDZD2O15018 2839 aa5.86□□□□□ -1.47
SEMA6A-202ENST00000343348 MXRA5Q9NR99 2828 aa5.86□□□□□ -1.47
SEMA6A-202ENST00000343348 KRTAP15-1Q3LI76 137 aa5.85□□□□□ -1.47
SEMA6A-202ENST00000343348 SMG1Q96Q15 3661 aaKnown RBP5.84□□□□□ -1.47
SEMA6A-202ENST00000343348 VWFP04275 2813 aa5.84□□□□□ -1.47
SEMA6A-202ENST00000343348 PKD1L1Q8TDX9 2849 aa5.84□□□□□ -1.48
SEMA6A-202ENST00000343348 KRTAP3-1Q9BYR8 98 aa5.82□□□□□ -1.48
SEMA6A-202ENST00000343348 CUBNO60494 3623 aa5.81□□□□□ -1.48
SEMA6A-202ENST00000343348 SVEP1Q4LDE5 3571 aa5.78□□□□□ -1.48
SEMA6A-202ENST00000343348 SPENQ96T58 3664 aaKnown RBP5.77□□□□□ -1.49
SEMA6A-202ENST00000343348 CRCT1Q9UGL9 99 aa5.75□□□□□ -1.49
SEMA6A-202ENST00000343348 DMDP11532 3685 aa5.75□□□□□ -1.49
SEMA6A-202ENST00000343348 KRTAP10-6P60371 365 aaPredicted RBP5.66□□□□□ -1.5
SEMA6A-202ENST00000343348 ZFHX3Q15911 3703 aa5.63□□□□□ -1.51
SEMA6A-202ENST00000343348 MEGF8Q7Z7M0 2845 aa5.55□□□□□ -1.52
SEMA6A-202ENST00000343348 SRRM2Q9UQ35 2752 aaKnown RBP5.55□□□□□ -1.52
SEMA6A-202ENST00000343348 CSMD2Q7Z408 3487 aa5.53□□□□□ -1.52
SEMA6A-202ENST00000343348 FBN3Q75N90 2809 aa5.51□□□□□ -1.53
SEMA6A-202ENST00000343348 INE1O15225 51 aa5.5□□□□□ -1.53
SEMA6A-202ENST00000343348 MUC3AQ02505 3323 aa5.49□□□□□ -1.53
SEMA6A-202ENST00000343348 COL7A1Q02388 2944 aa5.47□□□□□ -1.53
SEMA6A-202ENST00000343348 FBN1P35555 2871 aaKnown RBP5.46□□□□□ -1.54
SEMA6A-202ENST00000343348 KRTAP10-12P60413 245 aa5.45□□□□□ -1.54
SEMA6A-202ENST00000343348 TRRAPQ9Y4A5 3859 aa5.44□□□□□ -1.54
SEMA6A-202ENST00000343348 KRTAP3-3Q9BYR6 98 aa5.42□□□□□ -1.54
SEMA6A-202ENST00000343348 KRTAP3-2Q9BYR7 98 aa5.42□□□□□ -1.54
SEMA6A-202ENST00000343348 VPS13CQ709C8 3753 aa5.41□□□□□ -1.54
SEMA6A-202ENST00000343348 CSMD3Q7Z407 3707 aa5.4□□□□□ -1.55
SEMA6A-202ENST00000343348 ANK3Q12955 4377 aaKnown RBP5.39□□□□□ -1.55
SEMA6A-202ENST00000343348 LCE3AQ5TA76 89 aa5.32□□□□□ -1.56
SEMA6A-202ENST00000343348 KRTAP12-3P60328 96 aa5.31□□□□□ -1.56
SEMA6A-202ENST00000343348 OTOGQ6ZRI0 2925 aa5.3□□□□□ -1.56
SEMA6A-202ENST00000343348 KRTAP4-5Q9BYR2 181 aa5.29□□□□□ -1.56
SEMA6A-202ENST00000343348 MT1HL1P0DM35 61 aa5.28□□□□□ -1.56
SEMA6A-202ENST00000343348 BSNQ9UPA5 3926 aa5.28□□□□□ -1.56
SEMA6A-202ENST00000343348 HUWE1Q7Z6Z7 4374 aaKnown RBP5.25□□□□□ -1.57
SEMA6A-202ENST00000343348 LORP23490 312 aaPredicted RBP5.22□□□□□ -1.57
SEMA6A-202ENST00000343348 KRTAP10-5P60370 271 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms