RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 LPAP08519 4548 aa7.78□□□□□ -1.16
PMS1-201ENST00000342075 CXCL6P80162 114 aa7.78□□□□□ -1.16
PMS1-201ENST00000342075 IGHV6-1A0A0B4J1U7 121 aa7.78□□□□□ -1.16
PMS1-201ENST00000342075 A8MWP4 228 aa7.76□□□□□ -1.17
PMS1-201ENST00000342075 ATP5EP2Q5VTU8 51 aa7.75□□□□□ -1.17
PMS1-201ENST00000342075 PRR15Q8IV56 129 aa7.73□□□□□ -1.17
PMS1-201ENST00000342075 A0A1B0GVX0 72 aa7.72□□□□□ -1.17
PMS1-201ENST00000342075 C9orf92A6NGG3 77 aa7.72□□□□□ -1.17
PMS1-201ENST00000342075 J3KT08 172 aa7.72□□□□□ -1.17
PMS1-201ENST00000342075 WFDC13Q8IUB5 93 aa7.71□□□□□ -1.17
PMS1-201ENST00000342075 PRR4Q16378 134 aa7.7□□□□□ -1.18
PMS1-201ENST00000342075 MMP24-AS1A0A0U1RRL7 71 aa7.68□□□□□ -1.18
PMS1-201ENST00000342075 NDUFB1O75438 58 aa7.68□□□□□ -1.18
PMS1-201ENST00000342075 C8orf17Q9NRJ1 99 aa7.67□□□□□ -1.18
PMS1-201ENST00000342075 LRP2P98164 4655 aa7.67□□□□□ -1.18
PMS1-201ENST00000342075 FAM236AA0A1B0GUQ0 79 aa7.66□□□□□ -1.18
PMS1-201ENST00000342075 FAM236BA0A1B0GV22 79 aa7.66□□□□□ -1.18
PMS1-201ENST00000342075 IGLV7-46A0A075B6I9 117 aa7.65□□□□□ -1.18
PMS1-201ENST00000342075 HCG22E2RYF7 251 aa7.65□□□□□ -1.19
PMS1-201ENST00000342075 LINC00313P59037 77 aa7.63□□□□□ -1.19
PMS1-201ENST00000342075 IMUPQ9GZP8 106 aa7.63□□□□□ -1.19
PMS1-201ENST00000342075 CASC2Q6XLA1 102 aa7.62□□□□□ -1.19
PMS1-201ENST00000342075 hDV103S1A0JD37 113 aa7.62□□□□□ -1.19
PMS1-201ENST00000342075 HMCN2Q8NDA2 5059 aa7.61□□□□□ -1.19
PMS1-201ENST00000342075 KRTAP16-1A8MUX0 517 aa7.61□□□□□ -1.19
PMS1-201ENST00000342075 KRTAP13-3Q3SY46 172 aa7.58□□□□□ -1.2
PMS1-201ENST00000342075 FP248Q71RG6 208 aaPredicted RBP7.58□□□□□ -1.2
PMS1-201ENST00000342075 NDUFS5O43920 106 aa7.56□□□□□ -1.2
PMS1-201ENST00000342075 C8orf87E5RJ46 101 aa7.55□□□□□ -1.2
PMS1-201ENST00000342075 MRPL34Q9BQ48 92 aaKnown RBP7.55□□□□□ -1.2
PMS1-201ENST00000342075 SCGB1A1P11684 91 aa7.54□□□□□ -1.2
PMS1-201ENST00000342075 XP32Q5T750 250 aa7.52□□□□□ -1.21
PMS1-201ENST00000342075 TMEM254Q8TBM7 123 aa7.52□□□□□ -1.21
PMS1-201ENST00000342075 OCR1Q9BZK8 76 aa7.49□□□□□ -1.21
PMS1-201ENST00000342075 TPRXLQ17RH7 258 aa7.49□□□□□ -1.21
PMS1-201ENST00000342075 Q8N9P0 234 aaPredicted RBP7.49□□□□□ -1.21
PMS1-201ENST00000342075 Q5W150 140 aa7.48□□□□□ -1.21
PMS1-201ENST00000342075 C20orf166-AS1Q96NR2 134 aa7.45□□□□□ -1.22
PMS1-201ENST00000342075 MUC2Q02817 5179 aa7.45□□□□□ -1.22
PMS1-201ENST00000342075 ATOX1O00244 68 aa7.45□□□□□ -1.22
PMS1-201ENST00000342075 A8MUU9 505 aa7.44□□□□□ -1.22
PMS1-201ENST00000342075 UBR4Q5T4S7 5183 aa7.44□□□□□ -1.22
PMS1-201ENST00000342075 ANAPC13Q9BS18 74 aa7.43□□□□□ -1.22
PMS1-201ENST00000342075 Q75L30 129 aa7.4□□□□□ -1.23
PMS1-201ENST00000342075 RPL37P61927 97 aaKnown RBP7.39□□□□□ -1.23
PMS1-201ENST00000342075 TRAV7A0A075B6U4 112 aa7.38□□□□□ -1.23
PMS1-201ENST00000342075 SERP2Q8N6R1 65 aa7.38□□□□□ -1.23
PMS1-201ENST00000342075 H0Y9P7 68 aa7.36□□□□□ -1.23
PMS1-201ENST00000342075 PCOTHQ58A44 107 aa7.36□□□□□ -1.23
PMS1-201ENST00000342075 ZCCHC13Q8WW36 166 aaKnown RBP7.36□□□□□ -1.23
PMS1-201ENST00000342075 TRAV22A0A0B4J277 110 aa7.36□□□□□ -1.23
PMS1-201ENST00000342075 RNF213Q63HN8 5207 aa7.35□□□□□ -1.23
PMS1-201ENST00000342075 CCDC179H3BU77 68 aa7.35□□□□□ -1.23
PMS1-201ENST00000342075 UQCRQO14949 82 aa7.35□□□□□ -1.23
PMS1-201ENST00000342075 TP53AIP1Q9HCN2 124 aa7.35□□□□□ -1.23
PMS1-201ENST00000342075 SNURFQ9Y675 71 aa7.35□□□□□ -1.23
PMS1-201ENST00000342075 CYSTM1Q9H1C7 97 aa7.34□□□□□ -1.23
PMS1-201ENST00000342075 C20orf197Q8N268 126 aa7.33□□□□□ -1.24
PMS1-201ENST00000342075 COX7CP15954 63 aa7.33□□□□□ -1.24
PMS1-201ENST00000342075 PCP4P48539 62 aa7.33□□□□□ -1.24
PMS1-201ENST00000342075 ATP11AUNQ6ZP68 121 aa7.33□□□□□ -1.24
PMS1-201ENST00000342075 LINC00208Q96KT6 92 aa7.33□□□□□ -1.24
PMS1-201ENST00000342075 SMIM20Q8N5G0 67 aa7.32□□□□□ -1.24
PMS1-201ENST00000342075 IGKV2D-30A0A075B6S6 120 aa7.31□□□□□ -1.24
PMS1-201ENST00000342075 IGKV2-30P06310 120 aa7.31□□□□□ -1.24
PMS1-201ENST00000342075 C5orf47Q569G3 176 aa7.29□□□□□ -1.24
PMS1-201ENST00000342075 C1orf64Q8NEQ6 169 aa7.28□□□□□ -1.24
PMS1-201ENST00000342075 KRTAP4-1Q9BYQ7 146 aa7.27□□□□□ -1.24
PMS1-201ENST00000342075 A0A0U1RQV1 116 aa7.27□□□□□ -1.25
PMS1-201ENST00000342075 MP68P56378 58 aa7.27□□□□□ -1.25
PMS1-201ENST00000342075 MUC17Q685J3 4493 aa7.25□□□□□ -1.25
PMS1-201ENST00000342075 KLKP1Q107X0 134 aa7.25□□□□□ -1.25
PMS1-201ENST00000342075 SPINK7P58062 85 aa7.23□□□□□ -1.25
PMS1-201ENST00000342075 CYP4F30PQ9H0H9 118 aa7.22□□□□□ -1.25
PMS1-201ENST00000342075 SEC61BP60468 96 aaKnown RBP7.2□□□□□ -1.26
PMS1-201ENST00000342075 LOC101927531A0A1B0GV80 90 aa7.18□□□□□ -1.26
PMS1-201ENST00000342075 C7orf65Q6ZTY9 151 aa7.18□□□□□ -1.26
PMS1-201ENST00000342075 C4orf26Q17RF5 130 aa7.15□□□□□ -1.27
PMS1-201ENST00000342075 H3BPC8 53 aa7.14□□□□□ -1.27
PMS1-201ENST00000342075 H7BZZ5 65 aa7.14□□□□□ -1.27
PMS1-201ENST00000342075 HRES1P13985 223 aa7.13□□□□□ -1.27
PMS1-201ENST00000342075 FAT4Q6V0I7 4981 aa7.1□□□□□ -1.27
PMS1-201ENST00000342075 KRTAP3-1Q9BYR8 98 aa7.05□□□□□ -1.28
PMS1-201ENST00000342075 MPLKIPQ8TAP9 179 aa7.01□□□□□ -1.29
PMS1-201ENST00000342075 NDUFC1O43677 76 aa7□□□□□ -1.29
PMS1-201ENST00000342075 KRTAP19-2Q3LHN2 52 aa6.98□□□□□ -1.29
PMS1-201ENST00000342075 COX6B2Q6YFQ2 88 aa6.97□□□□□ -1.29
PMS1-201ENST00000342075 FAM236DA0A1B0GTK5 79 aa6.95□□□□□ -1.3
PMS1-201ENST00000342075 FAM236CP0DP71 79 aa6.95□□□□□ -1.3
PMS1-201ENST00000342075 SPANXA2-OT1Q8N9U9 137 aa6.94□□□□□ -1.3
PMS1-201ENST00000342075 RBM12B-AS1Q9P1G2 102 aa6.93□□□□□ -1.3
PMS1-201ENST00000342075 TMEM258P61165 79 aa6.93□□□□□ -1.3
PMS1-201ENST00000342075 DMAC1Q96GE9 116 aa6.93□□□□□ -1.3
PMS1-201ENST00000342075 FLGP20930 4061 aaPredicted RBP6.93□□□□□ -1.3
PMS1-201ENST00000342075 LCE2CQ5TA81 110 aa6.9□□□□□ -1.31
PMS1-201ENST00000342075 H1FX-AS1Q4G0G2 97 aa6.84□□□□□ -1.31
PMS1-201ENST00000342075 COA5Q86WW8 74 aa6.84□□□□□ -1.32
PMS1-201ENST00000342075 LCA10Q71F78 164 aa6.83□□□□□ -1.32
PMS1-201ENST00000342075 ACYP2P14621 99 aa6.83□□□□□ -1.32
PMS1-201ENST00000342075 A8MUN3 132 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms