RNA–Protein interactions for RNA: ENST00000341460.5

SYDE2-202, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYDE2, Length 5,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-202ENST00000341460 SPEGQ15772 3267 aa9.87□□□□□ -0.83
SYDE2-202ENST00000341460 BAHCC1Q9P281 2608 aa9.85□□□□□ -0.83
SYDE2-202ENST00000341460 STAB2Q8WWQ8 2551 aa9.85□□□□□ -0.83
SYDE2-202ENST00000341460 Q6ZRN7 208 aaPredicted RBP9.83□□□□□ -0.84
SYDE2-202ENST00000341460 P0C880 135 aa9.82□□□□□ -0.84
SYDE2-202ENST00000341460 ASH1LQ9NR48 2969 aaKnown RBP9.81□□□□□ -0.84
SYDE2-202ENST00000341460 PP632Q6XCG6 107 aa9.79□□□□□ -0.84
SYDE2-202ENST00000341460 CFAP47Q6ZTR5 3102 aa9.79□□□□□ -0.84
SYDE2-202ENST00000341460 TNP1P09430 55 aa9.78□□□□□ -0.84
SYDE2-202ENST00000341460 SPTBN5Q9NRC6 3674 aaKnown RBP9.77□□□□□ -0.84
SYDE2-202ENST00000341460 NSD1Q96L73 2696 aaPredicted RBP9.77□□□□□ -0.85
SYDE2-202ENST00000341460 ITPR2Q14571 2701 aa9.75□□□□□ -0.85
SYDE2-202ENST00000341460 KRTAP7-1Q8IUC3 87 aa9.73□□□□□ -0.85
SYDE2-202ENST00000341460 UTP20O75691 2785 aaKnown RBP9.71□□□□□ -0.86
SYDE2-202ENST00000341460 H0YAA0 97 aa9.71□□□□□ -0.86
SYDE2-202ENST00000341460 KRTAP13-2Q52LG2 175 aa9.68□□□□□ -0.86
SYDE2-202ENST00000341460 ZZEF1O43149 2961 aa9.68□□□□□ -0.86
SYDE2-202ENST00000341460 KRTAP13-1Q8IUC0 172 aa9.67□□□□□ -0.86
SYDE2-202ENST00000341460 EYSQ5T1H1 3165 aa9.66□□□□□ -0.86
SYDE2-202ENST00000341460 REV3LO60673 3130 aa9.64□□□□□ -0.87
SYDE2-202ENST00000341460 HIVEP1P15822 2718 aa9.62□□□□□ -0.87
SYDE2-202ENST00000341460 APCP25054 2843 aa9.6□□□□□ -0.87
SYDE2-202ENST00000341460 USP34Q70CQ2 3546 aa9.58□□□□□ -0.88
SYDE2-202ENST00000341460 KRTAP21-3Q3LHN1 58 aa9.56□□□□□ -0.88
SYDE2-202ENST00000341460 CELSR2Q9HCU4 2923 aa9.55□□□□□ -0.88
SYDE2-202ENST00000341460 MYO15AQ9UKN7 3530 aa9.52□□□□□ -0.88
SYDE2-202ENST00000341460 ZANQ9Y493 2812 aa9.52□□□□□ -0.89
SYDE2-202ENST00000341460 DMXL1Q9Y485 3027 aa9.52□□□□□ -0.89
SYDE2-202ENST00000341460 LOC400499M0QZD8 3231 aa9.51□□□□□ -0.89
SYDE2-202ENST00000341460 KRTAP10-8P60410 259 aa9.5□□□□□ -0.89
SYDE2-202ENST00000341460 NIPBLQ6KC79 2804 aaeCLIP9.44□□□□□ -0.9
SYDE2-202ENST00000341460 TNRC18O15417 2968 aaPredicted RBP9.44□□□□□ -0.9
SYDE2-202ENST00000341460 CRYBG3Q68DQ2 2970 aa9.44□□□□□ -0.9
SYDE2-202ENST00000341460 KMT2BQ9UMN6 2715 aaPredicted RBP9.43□□□□□ -0.9
SYDE2-202ENST00000341460 DCHS2Q6V1P9 2916 aa9.42□□□□□ -0.9
SYDE2-202ENST00000341460 HRNRQ86YZ3 2850 aaPredicted RBP9.41□□□□□ -0.9
SYDE2-202ENST00000341460 FBN2P35556 2912 aa9.32□□□□□ -0.92
SYDE2-202ENST00000341460 TENM4Q6N022 2769 aa9.27□□□□□ -0.93
SYDE2-202ENST00000341460 NF1P21359 2839 aa9.25□□□□□ -0.93
SYDE2-202ENST00000341460 WDFY3Q8IZQ1 3526 aa9.21□□□□□ -0.94
SYDE2-202ENST00000341460 KRTAP1-4P0C5Y4 121 aa9.2□□□□□ -0.94
SYDE2-202ENST00000341460 XP32Q5T750 250 aa9.18□□□□□ -0.94
SYDE2-202ENST00000341460 RELNP78509 3460 aa9.13□□□□□ -0.95
SYDE2-202ENST00000341460 TPRXLQ17RH7 258 aa9.07□□□□□ -0.96
SYDE2-202ENST00000341460 A0A1B0GVY2 172 aa9.06□□□□□ -0.96
SYDE2-202ENST00000341460 DCHS1Q96JQ0 3298 aa9.03□□□□□ -0.96
SYDE2-202ENST00000341460 ZFHX4Q86UP3 3567 aa9.03□□□□□ -0.96
SYDE2-202ENST00000341460 MXRA5Q9NR99 2828 aa9.02□□□□□ -0.97
SYDE2-202ENST00000341460 KRTAP13-3Q3SY46 172 aa8.98□□□□□ -0.97
SYDE2-202ENST00000341460 ASPMQ8IZT6 3477 aa8.98□□□□□ -0.97
SYDE2-202ENST00000341460 CELSR1Q9NYQ6 3014 aa8.97□□□□□ -0.97
SYDE2-202ENST00000341460 LAMA5O15230 3695 aa8.95□□□□□ -0.98
SYDE2-202ENST00000341460 KRTAP12-2P59991 146 aa8.95□□□□□ -0.98
SYDE2-202ENST00000341460 KRTAP10-10P60014 251 aa8.86□□□□□ -0.99
SYDE2-202ENST00000341460 TENM3Q9P273 2699 aa8.86□□□□□ -0.99
SYDE2-202ENST00000341460 TENM1Q9UKZ4 2725 aa8.84□□□□□ -0.99
SYDE2-202ENST00000341460 CSMD1Q96PZ7 3565 aa8.83□□□□□ -1
SYDE2-202ENST00000341460 KRTAP13-4Q3LI77 160 aa8.83□□□□□ -1
SYDE2-202ENST00000341460 PRO2289Q9P1D8 64 aa8.8□□□□□ -1
SYDE2-202ENST00000341460 DMDP11532 3685 aa8.78□□□□□ -1
SYDE2-202ENST00000341460 INE1O15225 51 aa8.77□□□□□ -1
SYDE2-202ENST00000341460 KRTAP12-1P59990 96 aa8.77□□□□□ -1
SYDE2-202ENST00000341460 KRTAP15-1Q3LI76 137 aa8.76□□□□□ -1.01
SYDE2-202ENST00000341460 TENM2Q9NT68 2774 aa8.73□□□□□ -1.01
SYDE2-202ENST00000341460 SMG1Q96Q15 3661 aaKnown RBP8.73□□□□□ -1.01
SYDE2-202ENST00000341460 TGP01266 2768 aa8.7□□□□□ -1.02
SYDE2-202ENST00000341460 PKD1L1Q8TDX9 2849 aa8.67□□□□□ -1.02
SYDE2-202ENST00000341460 MUC3AQ02505 3323 aa8.64□□□□□ -1.03
SYDE2-202ENST00000341460 PDZD2O15018 2839 aa8.63□□□□□ -1.03
SYDE2-202ENST00000341460 SVEP1Q4LDE5 3571 aa8.57□□□□□ -1.04
SYDE2-202ENST00000341460 NBPF19A0A087WUL8 3843 aa8.57□□□□□ -1.04
SYDE2-202ENST00000341460 VWFP04275 2813 aa8.56□□□□□ -1.04
SYDE2-202ENST00000341460 FBN1P35555 2871 aaKnown RBP8.54□□□□□ -1.04
SYDE2-202ENST00000341460 CUBNO60494 3623 aa8.45□□□□□ -1.06
SYDE2-202ENST00000341460 KRTAP3-1Q9BYR8 98 aa8.45□□□□□ -1.06
SYDE2-202ENST00000341460 KRTAP10-6P60371 365 aaPredicted RBP8.38□□□□□ -1.07
SYDE2-202ENST00000341460 OTOGQ6ZRI0 2925 aa8.37□□□□□ -1.07
SYDE2-202ENST00000341460 ZFHX3Q15911 3703 aa8.37□□□□□ -1.07
SYDE2-202ENST00000341460 CSMD2Q7Z408 3487 aa8.32□□□□□ -1.08
SYDE2-202ENST00000341460 SPENQ96T58 3664 aaKnown RBP8.3□□□□□ -1.08
SYDE2-202ENST00000341460 ANK3Q12955 4377 aaKnown RBP8.25□□□□□ -1.09
SYDE2-202ENST00000341460 FBN3Q75N90 2809 aa8.19□□□□□ -1.1
SYDE2-202ENST00000341460 SRRM2Q9UQ35 2752 aaKnown RBP8.15□□□□□ -1.1
SYDE2-202ENST00000341460 TRRAPQ9Y4A5 3859 aa8.14□□□□□ -1.11
SYDE2-202ENST00000341460 BSNQ9UPA5 3926 aa8.06□□□□□ -1.12
SYDE2-202ENST00000341460 MEGF8Q7Z7M0 2845 aa8.04□□□□□ -1.12
SYDE2-202ENST00000341460 KRTAP3-2Q9BYR7 98 aa8.01□□□□□ -1.13
SYDE2-202ENST00000341460 COL7A1Q02388 2944 aa7.94□□□□□ -1.14
SYDE2-202ENST00000341460 VPS13CQ709C8 3753 aa7.87□□□□□ -1.15
SYDE2-202ENST00000341460 CRCT1Q9UGL9 99 aa7.86□□□□□ -1.15
SYDE2-202ENST00000341460 KRTAP3-3Q9BYR6 98 aa7.85□□□□□ -1.15
SYDE2-202ENST00000341460 MT1HL1P0DM35 61 aa7.85□□□□□ -1.15
SYDE2-202ENST00000341460 KRTAP23-1A1A580 65 aa7.84□□□□□ -1.15
SYDE2-202ENST00000341460 HUWE1Q7Z6Z7 4374 aaKnown RBP7.77□□□□□ -1.17
SYDE2-202ENST00000341460 KRTAP10-12P60413 245 aa7.75□□□□□ -1.17
SYDE2-202ENST00000341460 KRTAP12-3P60328 96 aa7.68□□□□□ -1.18
SYDE2-202ENST00000341460 KRTAP10-4P60372 401 aaPredicted RBP7.62□□□□□ -1.19
SYDE2-202ENST00000341460 CSMD3Q7Z407 3707 aa7.61□□□□□ -1.19
SYDE2-202ENST00000341460 KRTAP4-5Q9BYR2 181 aa7.57□□□□□ -1.2
SYDE2-202ENST00000341460 LCE3AQ5TA76 89 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms