RNA–Protein interactions for RNA: ENST00000341259.6

SH2B3-201, Transcript of SH2B adaptor protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2B3, Length 5,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B3-201ENST00000341259 CFAP47Q6ZTR5 3102 aa11.01□□□□□ -0.65
SH2B3-201ENST00000341259 H1FX-AS1Q4G0G2 97 aa10.97□□□□□ -0.65
SH2B3-201ENST00000341259 R4GN34 69 aa10.97□□□□□ -0.65
SH2B3-201ENST00000341259 H3BS24 57 aa10.96□□□□□ -0.66
SH2B3-201ENST00000341259 LOC400499M0QZD8 3231 aa10.94□□□□□ -0.66
SH2B3-201ENST00000341259 MYO15AQ9UKN7 3530 aa10.93□□□□□ -0.66
SH2B3-201ENST00000341259 STAB2Q8WWQ8 2551 aa10.9□□□□□ -0.66
SH2B3-201ENST00000341259 KRTAP21-3Q3LHN1 58 aa10.9□□□□□ -0.67
SH2B3-201ENST00000341259 ZANQ9Y493 2812 aa10.89□□□□□ -0.67
SH2B3-201ENST00000341259 RPL37P61927 97 aaKnown RBP10.89□□□□□ -0.67
SH2B3-201ENST00000341259 ASH1LQ9NR48 2969 aaKnown RBP10.86□□□□□ -0.67
SH2B3-201ENST00000341259 NIPBLQ6KC79 2804 aaeCLIP10.84□□□□□ -0.67
SH2B3-201ENST00000341259 SPATA8Q6RVD6 105 aa10.82□□□□□ -0.68
SH2B3-201ENST00000341259 ADM2Q7Z4H4 148 aa10.82□□□□□ -0.68
SH2B3-201ENST00000341259 M0QZ58 72 aa10.82□□□□□ -0.68
SH2B3-201ENST00000341259 ROMO1P60602 79 aa10.78□□□□□ -0.68
SH2B3-201ENST00000341259 CELSR2Q9HCU4 2923 aa10.76□□□□□ -0.69
SH2B3-201ENST00000341259 CRYBG3Q68DQ2 2970 aa10.7□□□□□ -0.7
SH2B3-201ENST00000341259 A6NN06 94 aa10.7□□□□□ -0.7
SH2B3-201ENST00000341259 DCHS2Q6V1P9 2916 aa10.68□□□□□ -0.7
SH2B3-201ENST00000341259 DMBT1Q9UGM3 2413 aaPredicted RBP10.68□□□□□ -0.7
SH2B3-201ENST00000341259 A0A0A0MQY5 61 aa10.62□□□□□ -0.71
SH2B3-201ENST00000341259 TENM4Q6N022 2769 aa10.61□□□□□ -0.71
SH2B3-201ENST00000341259 FBN2P35556 2912 aa10.6□□□□□ -0.71
SH2B3-201ENST00000341259 KRTAP1-4P0C5Y4 121 aa10.6□□□□□ -0.71
SH2B3-201ENST00000341259 A8MUU9 505 aa10.58□□□□□ -0.72
SH2B3-201ENST00000341259 C20orf166-AS1Q96NR2 134 aa10.56□□□□□ -0.72
SH2B3-201ENST00000341259 A8MU10 97 aa10.55□□□□□ -0.72
SH2B3-201ENST00000341259 RELNP78509 3460 aa10.54□□□□□ -0.72
SH2B3-201ENST00000341259 NF1P21359 2839 aa10.49□□□□□ -0.73
SH2B3-201ENST00000341259 PLAC4Q8WY50 150 aa10.48□□□□□ -0.73
SH2B3-201ENST00000341259 WDFY3Q8IZQ1 3526 aa10.48□□□□□ -0.73
SH2B3-201ENST00000341259 KRTAP25-1Q3LHN0 102 aa10.46□□□□□ -0.73
SH2B3-201ENST00000341259 ASPMQ8IZT6 3477 aa10.43□□□□□ -0.74
SH2B3-201ENST00000341259 ZFHX4Q86UP3 3567 aa10.39□□□□□ -0.75
SH2B3-201ENST00000341259 MXRA5Q9NR99 2828 aa10.39□□□□□ -0.75
SH2B3-201ENST00000341259 FLG2Q5D862 2391 aaPredicted RBP10.39□□□□□ -0.75
SH2B3-201ENST00000341259 LAMA5O15230 3695 aa10.38□□□□□ -0.75
SH2B3-201ENST00000341259 DMDP11532 3685 aa10.35□□□□□ -0.75
SH2B3-201ENST00000341259 XP32Q5T750 250 aa10.33□□□□□ -0.76
SH2B3-201ENST00000341259 KRTAP16-1A8MUX0 517 aa10.29□□□□□ -0.76
SH2B3-201ENST00000341259 CELSR1Q9NYQ6 3014 aa10.26□□□□□ -0.77
SH2B3-201ENST00000341259 PDZD2O15018 2839 aa10.26□□□□□ -0.77
SH2B3-201ENST00000341259 DCHS1Q96JQ0 3298 aa10.22□□□□□ -0.77
SH2B3-201ENST00000341259 TENM3Q9P273 2699 aa10.19□□□□□ -0.78
SH2B3-201ENST00000341259 TPRXLQ17RH7 258 aa10.11□□□□□ -0.79
SH2B3-201ENST00000341259 NBPF19A0A087WUL8 3843 aa10.11□□□□□ -0.79
SH2B3-201ENST00000341259 A0A1B0GVY2 172 aa10.11□□□□□ -0.79
SH2B3-201ENST00000341259 SMG1Q96Q15 3661 aaKnown RBP10.1□□□□□ -0.79
SH2B3-201ENST00000341259 TENM2Q9NT68 2774 aa10.09□□□□□ -0.79
SH2B3-201ENST00000341259 CSMD1Q96PZ7 3565 aa10.08□□□□□ -0.8
SH2B3-201ENST00000341259 MUC3AQ02505 3323 aa10.07□□□□□ -0.8
SH2B3-201ENST00000341259 ANK3Q12955 4377 aaKnown RBP10.07□□□□□ -0.8
SH2B3-201ENST00000341259 KRTAP13-3Q3SY46 172 aa10.05□□□□□ -0.8
SH2B3-201ENST00000341259 NDUFAF8A1L188 74 aa10.04□□□□□ -0.8
SH2B3-201ENST00000341259 TENM1Q9UKZ4 2725 aa10.01□□□□□ -0.81
SH2B3-201ENST00000341259 H0YAA0 97 aa10□□□□□ -0.81
SH2B3-201ENST00000341259 TNP1P09430 55 aa9.96□□□□□ -0.81
SH2B3-201ENST00000341259 OTOGQ6ZRI0 2925 aa9.95□□□□□ -0.82
SH2B3-201ENST00000341259 KRTAP10-8P60410 259 aa9.94□□□□□ -0.82
SH2B3-201ENST00000341259 SVEP1Q4LDE5 3571 aa9.81□□□□□ -0.84
SH2B3-201ENST00000341259 SPENQ96T58 3664 aaKnown RBP9.8□□□□□ -0.84
SH2B3-201ENST00000341259 P0C880 135 aa9.79□□□□□ -0.84
SH2B3-201ENST00000341259 C10orf95Q9H7T3 257 aa9.79□□□□□ -0.84
SH2B3-201ENST00000341259 TGP01266 2768 aa9.79□□□□□ -0.84
SH2B3-201ENST00000341259 BSNQ9UPA5 3926 aa9.77□□□□□ -0.85
SH2B3-201ENST00000341259 VWFP04275 2813 aa9.75□□□□□ -0.85
SH2B3-201ENST00000341259 PKD1L1Q8TDX9 2849 aa9.7□□□□□ -0.86
SH2B3-201ENST00000341259 FBN1P35555 2871 aaKnown RBP9.7□□□□□ -0.86
SH2B3-201ENST00000341259 PP632Q6XCG6 107 aa9.69□□□□□ -0.86
SH2B3-201ENST00000341259 ZFHX3Q15911 3703 aa9.65□□□□□ -0.86
SH2B3-201ENST00000341259 KRTAP10-10P60014 251 aa9.63□□□□□ -0.87
SH2B3-201ENST00000341259 CSMD2Q7Z408 3487 aa9.61□□□□□ -0.87
SH2B3-201ENST00000341259 TRRAPQ9Y4A5 3859 aa9.53□□□□□ -0.88
SH2B3-201ENST00000341259 KRTAP3-1Q9BYR8 98 aa9.5□□□□□ -0.89
SH2B3-201ENST00000341259 HUWE1Q7Z6Z7 4374 aaKnown RBP9.44□□□□□ -0.9
SH2B3-201ENST00000341259 KRTAP12-2P59991 146 aa9.43□□□□□ -0.9
SH2B3-201ENST00000341259 PRO2289Q9P1D8 64 aa9.36□□□□□ -0.91
SH2B3-201ENST00000341259 CUBNO60494 3623 aa9.33□□□□□ -0.92
SH2B3-201ENST00000341259 FBN3Q75N90 2809 aa9.28□□□□□ -0.92
SH2B3-201ENST00000341259 KRTAP12-1P59990 96 aa9.27□□□□□ -0.93
SH2B3-201ENST00000341259 VPS13CQ709C8 3753 aa9.24□□□□□ -0.93
SH2B3-201ENST00000341259 MT1HL1P0DM35 61 aa9.21□□□□□ -0.94
SH2B3-201ENST00000341259 MEGF8Q7Z7M0 2845 aa9.2□□□□□ -0.94
SH2B3-201ENST00000341259 KRTAP13-4Q3LI77 160 aa9.16□□□□□ -0.94
SH2B3-201ENST00000341259 KRTAP10-6P60371 365 aaPredicted RBP9.15□□□□□ -0.94
SH2B3-201ENST00000341259 KRTAP10-4P60372 401 aaPredicted RBP9.14□□□□□ -0.95
SH2B3-201ENST00000341259 ALMS1Q8TCU4 4167 aa9.11□□□□□ -0.95
SH2B3-201ENST00000341259 SRRM2Q9UQ35 2752 aaKnown RBP9.01□□□□□ -0.97
SH2B3-201ENST00000341259 AKAP9Q99996 3911 aa9□□□□□ -0.97
SH2B3-201ENST00000341259 DNAH9Q9NYC9 4486 aa9□□□□□ -0.97
SH2B3-201ENST00000341259 ZNF469Q96JG9 3925 aaPredicted RBP8.94□□□□□ -0.98
SH2B3-201ENST00000341259 KRTAP3-3Q9BYR6 98 aa8.94□□□□□ -0.98
SH2B3-201ENST00000341259 KRTAP4-5Q9BYR2 181 aa8.94□□□□□ -0.98
SH2B3-201ENST00000341259 KRTAP3-2Q9BYR7 98 aa8.89□□□□□ -0.99
SH2B3-201ENST00000341259 COL7A1Q02388 2944 aa8.87□□□□□ -0.99
SH2B3-201ENST00000341259 DNAH1Q9P2D7 4330 aa8.76□□□□□ -1.01
SH2B3-201ENST00000341259 PLECQ15149 4684 aaKnown RBP8.7□□□□□ -1.02
SH2B3-201ENST00000341259 DNAH5Q8TE73 4624 aa8.68□□□□□ -1.02
SH2B3-201ENST00000341259 CSMD3Q7Z407 3707 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms