RNA–Protein interactions for RNA: ENST00000340994.4

PKHD1-201, Transcript of PKHD1, fibrocystin/polyductin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PKHD1, Length 11,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1-201ENST00000340994 TNRC18O15417 2968 aaPredicted RBP4.56□□□□□ -1.68
PKHD1-201ENST00000340994 CRYBG3Q68DQ2 2970 aa4.56□□□□□ -1.68
PKHD1-201ENST00000340994 UTRNP46939 3433 aa4.55□□□□□ -1.68
PKHD1-201ENST00000340994 DCHS2Q6V1P9 2916 aa4.55□□□□□ -1.68
PKHD1-201ENST00000340994 H0YAA0 97 aa4.54□□□□□ -1.68
PKHD1-201ENST00000340994 KRTAP10-2P60368 255 aa4.53□□□□□ -1.68
PKHD1-201ENST00000340994 COL12A1Q99715 3063 aa4.53□□□□□ -1.68
PKHD1-201ENST00000340994 PRUNE2Q8WUY3 3088 aa4.52□□□□□ -1.69
PKHD1-201ENST00000340994 DMXL2Q8TDJ6 3036 aa4.49□□□□□ -1.69
PKHD1-201ENST00000340994 KRTAP13-2Q52LG2 175 aa4.48□□□□□ -1.69
PKHD1-201ENST00000340994 WDFY4Q6ZS81 3184 aa4.46□□□□□ -1.69
PKHD1-201ENST00000340994 KRTAP7-1Q8IUC3 87 aa4.46□□□□□ -1.7
PKHD1-201ENST00000340994 FBN2P35556 2912 aa4.45□□□□□ -1.7
PKHD1-201ENST00000340994 HRNRQ86YZ3 2850 aaPredicted RBP4.45□□□□□ -1.7
PKHD1-201ENST00000340994 TENM4Q6N022 2769 aa4.44□□□□□ -1.7
PKHD1-201ENST00000340994 MXRA5Q9NR99 2828 aa4.43□□□□□ -1.7
PKHD1-201ENST00000340994 VWFP04275 2813 aa4.4□□□□□ -1.71
PKHD1-201ENST00000340994 FREM2Q5SZK8 3169 aa4.37□□□□□ -1.71
PKHD1-201ENST00000340994 PRO2289Q9P1D8 64 aa4.35□□□□□ -1.71
PKHD1-201ENST00000340994 PKD1L1Q8TDX9 2849 aa4.35□□□□□ -1.71
PKHD1-201ENST00000340994 RANBP2P49792 3224 aaKnown RBP4.33□□□□□ -1.72
PKHD1-201ENST00000340994 LAMA1P25391 3075 aa4.33□□□□□ -1.72
PKHD1-201ENST00000340994 XIRP2A4UGR9 3374 aa4.31□□□□□ -1.72
PKHD1-201ENST00000340994 BOD1L1Q8NFC6 3051 aa4.29□□□□□ -1.72
PKHD1-201ENST00000340994 KRTAP10-8P60410 259 aa4.29□□□□□ -1.72
PKHD1-201ENST00000340994 DMXL1Q9Y485 3027 aa4.29□□□□□ -1.72
PKHD1-201ENST00000340994 CELSR1Q9NYQ6 3014 aa4.28□□□□□ -1.72
PKHD1-201ENST00000340994 TENM2Q9NT68 2774 aa4.28□□□□□ -1.72
PKHD1-201ENST00000340994 XP32Q5T750 250 aa4.28□□□□□ -1.72
PKHD1-201ENST00000340994 ADGRG4Q8IZF6 3080 aa4.27□□□□□ -1.73
PKHD1-201ENST00000340994 TPRXLQ17RH7 258 aa4.27□□□□□ -1.73
PKHD1-201ENST00000340994 ATMQ13315 3056 aa4.26□□□□□ -1.73
PKHD1-201ENST00000340994 INE1O15225 51 aa4.25□□□□□ -1.73
PKHD1-201ENST00000340994 KRTAP13-4Q3LI77 160 aa4.24□□□□□ -1.73
PKHD1-201ENST00000340994 COL7A1Q02388 2944 aa4.23□□□□□ -1.73
PKHD1-201ENST00000340994 USP34Q70CQ2 3546 aa4.23□□□□□ -1.73
PKHD1-201ENST00000340994 KRTAP13-3Q3SY46 172 aa4.23□□□□□ -1.73
PKHD1-201ENST00000340994 HTTP42858 3142 aa4.23□□□□□ -1.73
PKHD1-201ENST00000340994 KRTAP1-4P0C5Y4 121 aa4.22□□□□□ -1.73
PKHD1-201ENST00000340994 MKI67P46013 3256 aaKnown RBP4.2□□□□□ -1.74
PKHD1-201ENST00000340994 COL6A3P12111 3177 aa4.19□□□□□ -1.74
PKHD1-201ENST00000340994 ZFHX3Q15911 3703 aa4.17□□□□□ -1.74
PKHD1-201ENST00000340994 MEGF8Q7Z7M0 2845 aa4.16□□□□□ -1.74
PKHD1-201ENST00000340994 KRTAP12-2P59991 146 aa4.15□□□□□ -1.75
PKHD1-201ENST00000340994 REV3LO60673 3130 aa4.14□□□□□ -1.75
PKHD1-201ENST00000340994 UNC80Q8N2C7 3258 aa4.14□□□□□ -1.75
PKHD1-201ENST00000340994 LAMA3Q16787 3333 aa4.11□□□□□ -1.75
PKHD1-201ENST00000340994 CELSR3Q9NYQ7 3312 aa4.11□□□□□ -1.75
PKHD1-201ENST00000340994 KRTAP12-1P59990 96 aa4.09□□□□□ -1.75
PKHD1-201ENST00000340994 FBN3Q75N90 2809 aa4.06□□□□□ -1.76
PKHD1-201ENST00000340994 KRTAP10-10P60014 251 aa4.05□□□□□ -1.76
PKHD1-201ENST00000340994 KRTAP15-1Q3LI76 137 aa4.05□□□□□ -1.76
PKHD1-201ENST00000340994 KRTAP21-3Q3LHN1 58 aa4.03□□□□□ -1.76
PKHD1-201ENST00000340994 FBN1P35555 2871 aaKnown RBP4.02□□□□□ -1.77
PKHD1-201ENST00000340994 CFAP47Q6ZTR5 3102 aa4□□□□□ -1.77
PKHD1-201ENST00000340994 BRCA2P51587 3418 aa4□□□□□ -1.77
PKHD1-201ENST00000340994 DNAH14Q0VDD8 3507 aa3.99□□□□□ -1.77
PKHD1-201ENST00000340994 A0A1B0GVY2 172 aa3.96□□□□□ -1.78
PKHD1-201ENST00000340994 VCANP13611 3396 aa3.95□□□□□ -1.78
PKHD1-201ENST00000340994 SPTBN5Q9NRC6 3674 aaKnown RBP3.94□□□□□ -1.78
PKHD1-201ENST00000340994 KRTAP23-1A1A580 65 aa3.93□□□□□ -1.78
PKHD1-201ENST00000340994 OTOGQ6ZRI0 2925 aa3.89□□□□□ -1.79
PKHD1-201ENST00000340994 CDH23Q9H251 3354 aa3.89□□□□□ -1.79
PKHD1-201ENST00000340994 KRTAP10-6P60371 365 aaPredicted RBP3.89□□□□□ -1.79
PKHD1-201ENST00000340994 SPEGQ15772 3267 aa3.88□□□□□ -1.79
PKHD1-201ENST00000340994 MYO15AQ9UKN7 3530 aa3.87□□□□□ -1.79
PKHD1-201ENST00000340994 KRTAP3-1Q9BYR8 98 aa3.86□□□□□ -1.79
PKHD1-201ENST00000340994 EYSQ5T1H1 3165 aa3.81□□□□□ -1.8
PKHD1-201ENST00000340994 NBPF19A0A087WUL8 3843 aa3.81□□□□□ -1.8
PKHD1-201ENST00000340994 SPENQ96T58 3664 aaKnown RBP3.8□□□□□ -1.8
PKHD1-201ENST00000340994 WDFY3Q8IZQ1 3526 aa3.77□□□□□ -1.81
PKHD1-201ENST00000340994 ZFHX4Q86UP3 3567 aa3.76□□□□□ -1.81
PKHD1-201ENST00000340994 KRTAP10-12P60413 245 aa3.75□□□□□ -1.81
PKHD1-201ENST00000340994 SMG1Q96Q15 3661 aaKnown RBP3.72□□□□□ -1.81
PKHD1-201ENST00000340994 AKAP9Q99996 3911 aa3.72□□□□□ -1.81
PKHD1-201ENST00000340994 KRTAP3-2Q9BYR7 98 aa3.7□□□□□ -1.82
PKHD1-201ENST00000340994 DMDP11532 3685 aa3.7□□□□□ -1.82
PKHD1-201ENST00000340994 SZT2Q5T011 3432 aa3.69□□□□□ -1.82
PKHD1-201ENST00000340994 LOC400499M0QZD8 3231 aa3.69□□□□□ -1.82
PKHD1-201ENST00000340994 KRTAP12-3P60328 96 aa3.65□□□□□ -1.82
PKHD1-201ENST00000340994 TRRAPQ9Y4A5 3859 aa3.65□□□□□ -1.82
PKHD1-201ENST00000340994 ALMS1Q8TCU4 4167 aa3.65□□□□□ -1.83
PKHD1-201ENST00000340994 KRTAP3-3Q9BYR6 98 aa3.64□□□□□ -1.83
PKHD1-201ENST00000340994 DCHS1Q96JQ0 3298 aa3.64□□□□□ -1.83
PKHD1-201ENST00000340994 VPS13CQ709C8 3753 aa3.63□□□□□ -1.83
PKHD1-201ENST00000340994 LAMA5O15230 3695 aa3.62□□□□□ -1.83
PKHD1-201ENST00000340994 RELNP78509 3460 aa3.62□□□□□ -1.83
PKHD1-201ENST00000340994 ASPMQ8IZT6 3477 aa3.56□□□□□ -1.84
PKHD1-201ENST00000340994 BSNQ9UPA5 3926 aa3.52□□□□□ -1.85
PKHD1-201ENST00000340994 CSMD1Q96PZ7 3565 aa3.51□□□□□ -1.85
PKHD1-201ENST00000340994 LCE3AQ5TA76 89 aa3.48□□□□□ -1.85
PKHD1-201ENST00000340994 KRTAP19-4Q3LI73 84 aa3.43□□□□□ -1.86
PKHD1-201ENST00000340994 DNAH3Q8TD57 4116 aa3.41□□□□□ -1.86
PKHD1-201ENST00000340994 CRCT1Q9UGL9 99 aa3.39□□□□□ -1.87
PKHD1-201ENST00000340994 MUC3AQ02505 3323 aa3.39□□□□□ -1.87
PKHD1-201ENST00000340994 KRTAP10-5P60370 271 aa3.39□□□□□ -1.87
PKHD1-201ENST00000340994 CSMD3Q7Z407 3707 aa3.38□□□□□ -1.87
PKHD1-201ENST00000340994 MT1HL1P0DM35 61 aa3.37□□□□□ -1.87
PKHD1-201ENST00000340994 CUBNO60494 3623 aa3.36□□□□□ -1.87
PKHD1-201ENST00000340994 SVEP1Q4LDE5 3571 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 133.7 ms