RNA–Protein interactions for RNA: ENST00000339362.9

NEO1-202, Transcript of neogenin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene NEO1, Length 7,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEO1-202ENST00000339362 KRTAP11-1Q8IUC1 163 aa9.19□□□□□ -0.94
NEO1-202ENST00000339362 LAMA5O15230 3695 aa9.19□□□□□ -0.94
NEO1-202ENST00000339362 ADGRG4Q8IZF6 3080 aa9.18□□□□□ -0.94
NEO1-202ENST00000339362 KRTAP7-1Q8IUC3 87 aa9.16□□□□□ -0.94
NEO1-202ENST00000339362 COL12A1Q99715 3063 aa9.14□□□□□ -0.95
NEO1-202ENST00000339362 SETXQ7Z333 2677 aaKnown RBP9.11□□□□□ -0.95
NEO1-202ENST00000339362 UNC79Q9P2D8 2635 aa9.1□□□□□ -0.95
NEO1-202ENST00000339362 Q6ZRN7 208 aaPredicted RBP9.09□□□□□ -0.95
NEO1-202ENST00000339362 STAB2Q8WWQ8 2551 aa9.08□□□□□ -0.96
NEO1-202ENST00000339362 COL6A5A8TX70 2615 aa9.07□□□□□ -0.96
NEO1-202ENST00000339362 DSPP15924 2871 aaKnown RBP9.07□□□□□ -0.96
NEO1-202ENST00000339362 NBEAL1Q6ZS30 2694 aa9.06□□□□□ -0.96
NEO1-202ENST00000339362 PP632Q6XCG6 107 aa9.05□□□□□ -0.96
NEO1-202ENST00000339362 ZZEF1O43149 2961 aa9.04□□□□□ -0.96
NEO1-202ENST00000339362 NBPF19A0A087WUL8 3843 aa9.03□□□□□ -0.96
NEO1-202ENST00000339362 NBEAL2Q6ZNJ1 2754 aa9.03□□□□□ -0.96
NEO1-202ENST00000339362 IGSF10Q6WRI0 2623 aa9.02□□□□□ -0.97
NEO1-202ENST00000339362 KRTAP13-1Q8IUC0 172 aa9.01□□□□□ -0.97
NEO1-202ENST00000339362 RPS29P62273 56 aaKnown RBP8.99□□□□□ -0.97
NEO1-202ENST00000339362 BAHCC1Q9P281 2608 aa8.97□□□□□ -0.97
NEO1-202ENST00000339362 ZFHX4Q86UP3 3567 aa8.96□□□□□ -0.98
NEO1-202ENST00000339362 KRTAP13-2Q52LG2 175 aa8.94□□□□□ -0.98
NEO1-202ENST00000339362 RELNP78509 3460 aa8.94□□□□□ -0.98
NEO1-202ENST00000339362 CSMD1Q96PZ7 3565 aa8.94□□□□□ -0.98
NEO1-202ENST00000339362 NOTCH1P46531 2555 aa8.92□□□□□ -0.98
NEO1-202ENST00000339362 KRTAP10-10P60014 251 aa8.91□□□□□ -0.98
NEO1-202ENST00000339362 TNRC18O15417 2968 aaPredicted RBP8.9□□□□□ -0.98
NEO1-202ENST00000339362 TACC2O95359 2948 aa8.89□□□□□ -0.99
NEO1-202ENST00000339362 PRO2289Q9P1D8 64 aa8.87□□□□□ -0.99
NEO1-202ENST00000339362 ITPR2Q14571 2701 aa8.83□□□□□ -1
NEO1-202ENST00000339362 UBR5O95071 2799 aaPredicted RBP8.82□□□□□ -1
NEO1-202ENST00000339362 DMXL1Q9Y485 3027 aa8.78□□□□□ -1
NEO1-202ENST00000339362 ITPR1Q14643 2758 aa8.76□□□□□ -1.01
NEO1-202ENST00000339362 DMDP11532 3685 aa8.75□□□□□ -1.01
NEO1-202ENST00000339362 APCP25054 2843 aa8.74□□□□□ -1.01
NEO1-202ENST00000339362 SPENQ96T58 3664 aaKnown RBP8.73□□□□□ -1.01
NEO1-202ENST00000339362 NBEAQ8NFP9 2946 aa8.72□□□□□ -1.01
NEO1-202ENST00000339362 H0YAA0 97 aa8.71□□□□□ -1.01
NEO1-202ENST00000339362 NSD1Q96L73 2696 aaPredicted RBP8.71□□□□□ -1.01
NEO1-202ENST00000339362 KMT2BQ9UMN6 2715 aaPredicted RBP8.68□□□□□ -1.02
NEO1-202ENST00000339362 CUBNO60494 3623 aa8.67□□□□□ -1.02
NEO1-202ENST00000339362 FLNCQ14315 2725 aa8.63□□□□□ -1.03
NEO1-202ENST00000339362 UTP20O75691 2785 aaKnown RBP8.63□□□□□ -1.03
NEO1-202ENST00000339362 HIVEP1P15822 2718 aa8.62□□□□□ -1.03
NEO1-202ENST00000339362 XP32Q5T750 250 aa8.61□□□□□ -1.03
NEO1-202ENST00000339362 SMG1Q96Q15 3661 aaKnown RBP8.6□□□□□ -1.03
NEO1-202ENST00000339362 KRTAP1-4P0C5Y4 121 aa8.52□□□□□ -1.05
NEO1-202ENST00000339362 KRTAP12-2P59991 146 aa8.51□□□□□ -1.05
NEO1-202ENST00000339362 SVEP1Q4LDE5 3571 aa8.51□□□□□ -1.05
NEO1-202ENST00000339362 CELSR2Q9HCU4 2923 aa8.49□□□□□ -1.05
NEO1-202ENST00000339362 CELSR1Q9NYQ6 3014 aa8.45□□□□□ -1.06
NEO1-202ENST00000339362 ZFHX3Q15911 3703 aa8.43□□□□□ -1.06
NEO1-202ENST00000339362 KRTAP21-3Q3LHN1 58 aa8.42□□□□□ -1.06
NEO1-202ENST00000339362 NIPBLQ6KC79 2804 aaeCLIP8.38□□□□□ -1.07
NEO1-202ENST00000339362 HRNRQ86YZ3 2850 aaPredicted RBP8.37□□□□□ -1.07
NEO1-202ENST00000339362 KRTAP15-1Q3LI76 137 aa8.3□□□□□ -1.08
NEO1-202ENST00000339362 TPRXLQ17RH7 258 aa8.3□□□□□ -1.08
NEO1-202ENST00000339362 ZANQ9Y493 2812 aa8.27□□□□□ -1.09
NEO1-202ENST00000339362 DCHS2Q6V1P9 2916 aa8.26□□□□□ -1.09
NEO1-202ENST00000339362 CRCT1Q9UGL9 99 aa8.25□□□□□ -1.09
NEO1-202ENST00000339362 CSMD2Q7Z408 3487 aa8.25□□□□□ -1.09
NEO1-202ENST00000339362 MUC3AQ02505 3323 aa8.24□□□□□ -1.09
NEO1-202ENST00000339362 FBN2P35556 2912 aa8.19□□□□□ -1.1
NEO1-202ENST00000339362 TENM4Q6N022 2769 aa8.17□□□□□ -1.1
NEO1-202ENST00000339362 TENM1Q9UKZ4 2725 aa8.16□□□□□ -1.1
NEO1-202ENST00000339362 KRTAP13-4Q3LI77 160 aa8.14□□□□□ -1.11
NEO1-202ENST00000339362 KRTAP13-3Q3SY46 172 aa8.13□□□□□ -1.11
NEO1-202ENST00000339362 PKD1L1Q8TDX9 2849 aa8.05□□□□□ -1.12
NEO1-202ENST00000339362 NF1P21359 2839 aa8.04□□□□□ -1.12
NEO1-202ENST00000339362 VWFP04275 2813 aa8.03□□□□□ -1.12
NEO1-202ENST00000339362 KRTAP12-1P59990 96 aa7.94□□□□□ -1.14
NEO1-202ENST00000339362 TENM2Q9NT68 2774 aa7.92□□□□□ -1.14
NEO1-202ENST00000339362 VPS13CQ709C8 3753 aa7.92□□□□□ -1.14
NEO1-202ENST00000339362 MXRA5Q9NR99 2828 aa7.86□□□□□ -1.15
NEO1-202ENST00000339362 TGP01266 2768 aa7.86□□□□□ -1.15
NEO1-202ENST00000339362 CSMD3Q7Z407 3707 aa7.85□□□□□ -1.15
NEO1-202ENST00000339362 INE1O15225 51 aa7.85□□□□□ -1.15
NEO1-202ENST00000339362 TENM3Q9P273 2699 aa7.85□□□□□ -1.15
NEO1-202ENST00000339362 BSNQ9UPA5 3926 aa7.81□□□□□ -1.16
NEO1-202ENST00000339362 KRTAP3-1Q9BYR8 98 aa7.73□□□□□ -1.17
NEO1-202ENST00000339362 TRRAPQ9Y4A5 3859 aa7.72□□□□□ -1.17
NEO1-202ENST00000339362 PDZD2O15018 2839 aa7.68□□□□□ -1.18
NEO1-202ENST00000339362 ANK3Q12955 4377 aaKnown RBP7.59□□□□□ -1.19
NEO1-202ENST00000339362 KRTAP10-12P60413 245 aa7.56□□□□□ -1.2
NEO1-202ENST00000339362 KRTAP10-5P60370 271 aa7.5□□□□□ -1.21
NEO1-202ENST00000339362 KRTAP10-6P60371 365 aaPredicted RBP7.5□□□□□ -1.21
NEO1-202ENST00000339362 MEGF8Q7Z7M0 2845 aa7.47□□□□□ -1.21
NEO1-202ENST00000339362 FBN1P35555 2871 aaKnown RBP7.45□□□□□ -1.22
NEO1-202ENST00000339362 OTOGQ6ZRI0 2925 aa7.43□□□□□ -1.22
NEO1-202ENST00000339362 COL7A1Q02388 2944 aa7.41□□□□□ -1.22
NEO1-202ENST00000339362 SRRM2Q9UQ35 2752 aaKnown RBP7.4□□□□□ -1.22
NEO1-202ENST00000339362 ZNF469Q96JG9 3925 aaPredicted RBP7.35□□□□□ -1.23
NEO1-202ENST00000339362 AKAP9Q99996 3911 aa7.35□□□□□ -1.23
NEO1-202ENST00000339362 KRTAP12-3P60328 96 aa7.3□□□□□ -1.24
NEO1-202ENST00000339362 KRTAP3-2Q9BYR7 98 aa7.25□□□□□ -1.25
NEO1-202ENST00000339362 MT1HL1P0DM35 61 aa7.24□□□□□ -1.25
NEO1-202ENST00000339362 KRTAP3-3Q9BYR6 98 aa7.24□□□□□ -1.25
NEO1-202ENST00000339362 LCE3AQ5TA76 89 aa7.22□□□□□ -1.25
NEO1-202ENST00000339362 FBN3Q75N90 2809 aa7.21□□□□□ -1.26
NEO1-202ENST00000339362 HUWE1Q7Z6Z7 4374 aaKnown RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms