RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 RPS29P62273 56 aaKnown RBP6.46□□□□□ -1.38
SHANK2-201ENST00000338508 DSPP15924 2871 aaKnown RBP6.45□□□□□ -1.38
SHANK2-201ENST00000338508 IGSF10Q6WRI0 2623 aa6.44□□□□□ -1.38
SHANK2-201ENST00000338508 Q6ZRN7 208 aaPredicted RBP6.44□□□□□ -1.38
SHANK2-201ENST00000338508 KRTAP7-1Q8IUC3 87 aa6.41□□□□□ -1.38
SHANK2-201ENST00000338508 KRTAP10-10P60014 251 aa6.4□□□□□ -1.38
SHANK2-201ENST00000338508 LRBAP50851 2863 aa6.38□□□□□ -1.39
SHANK2-201ENST00000338508 COL12A1Q99715 3063 aa6.37□□□□□ -1.39
SHANK2-201ENST00000338508 UBR5O95071 2799 aaPredicted RBP6.37□□□□□ -1.39
SHANK2-201ENST00000338508 LAMA1P25391 3075 aa6.36□□□□□ -1.39
SHANK2-201ENST00000338508 P0C880 135 aa6.33□□□□□ -1.4
SHANK2-201ENST00000338508 UTP20O75691 2785 aaKnown RBP6.33□□□□□ -1.4
SHANK2-201ENST00000338508 HIVEP1P15822 2718 aa6.32□□□□□ -1.4
SHANK2-201ENST00000338508 TACC2O95359 2948 aa6.31□□□□□ -1.4
SHANK2-201ENST00000338508 BOD1L1Q8NFC6 3051 aa6.29□□□□□ -1.4
SHANK2-201ENST00000338508 KRTAP13-1Q8IUC0 172 aa6.28□□□□□ -1.4
SHANK2-201ENST00000338508 ATMQ13315 3056 aa6.28□□□□□ -1.4
SHANK2-201ENST00000338508 XP32Q5T750 250 aa6.27□□□□□ -1.41
SHANK2-201ENST00000338508 FRYLO94915 3013 aa6.27□□□□□ -1.41
SHANK2-201ENST00000338508 PRO2289Q9P1D8 64 aa6.25□□□□□ -1.41
SHANK2-201ENST00000338508 ITPR1Q14643 2758 aa6.24□□□□□ -1.41
SHANK2-201ENST00000338508 PP632Q6XCG6 107 aa6.24□□□□□ -1.41
SHANK2-201ENST00000338508 USP34Q70CQ2 3546 aa6.22□□□□□ -1.41
SHANK2-201ENST00000338508 ZZEF1O43149 2961 aa6.19□□□□□ -1.42
SHANK2-201ENST00000338508 ADGRG4Q8IZF6 3080 aa6.17□□□□□ -1.42
SHANK2-201ENST00000338508 H0YAA0 97 aa6.17□□□□□ -1.42
SHANK2-201ENST00000338508 SPTBN5Q9NRC6 3674 aaKnown RBP6.16□□□□□ -1.42
SHANK2-201ENST00000338508 CELSR2Q9HCU4 2923 aa6.14□□□□□ -1.43
SHANK2-201ENST00000338508 MYO15AQ9UKN7 3530 aa6.14□□□□□ -1.43
SHANK2-201ENST00000338508 WDFY3Q8IZQ1 3526 aa6.13□□□□□ -1.43
SHANK2-201ENST00000338508 DCHS1Q96JQ0 3298 aa6.13□□□□□ -1.43
SHANK2-201ENST00000338508 ASPMQ8IZT6 3477 aa6.1□□□□□ -1.43
SHANK2-201ENST00000338508 TENM1Q9UKZ4 2725 aa6.09□□□□□ -1.44
SHANK2-201ENST00000338508 FLNCQ14315 2725 aa6.08□□□□□ -1.44
SHANK2-201ENST00000338508 KRTAP1-4P0C5Y4 121 aa6.06□□□□□ -1.44
SHANK2-201ENST00000338508 EYSQ5T1H1 3165 aa6.06□□□□□ -1.44
SHANK2-201ENST00000338508 LOC400499M0QZD8 3231 aa6.06□□□□□ -1.44
SHANK2-201ENST00000338508 NBEAQ8NFP9 2946 aa6.06□□□□□ -1.44
SHANK2-201ENST00000338508 TPRXLQ17RH7 258 aa6.06□□□□□ -1.44
SHANK2-201ENST00000338508 TNRC18O15417 2968 aaPredicted RBP6.03□□□□□ -1.44
SHANK2-201ENST00000338508 TENM4Q6N022 2769 aa6.02□□□□□ -1.45
SHANK2-201ENST00000338508 KRTAP21-3Q3LHN1 58 aa6.01□□□□□ -1.45
SHANK2-201ENST00000338508 ZFHX4Q86UP3 3567 aa6.01□□□□□ -1.45
SHANK2-201ENST00000338508 CELSR1Q9NYQ6 3014 aa6□□□□□ -1.45
SHANK2-201ENST00000338508 DCHS2Q6V1P9 2916 aa5.99□□□□□ -1.45
SHANK2-201ENST00000338508 DMXL1Q9Y485 3027 aa5.98□□□□□ -1.45
SHANK2-201ENST00000338508 NF1P21359 2839 aa5.97□□□□□ -1.45
SHANK2-201ENST00000338508 KRTAP13-3Q3SY46 172 aa5.94□□□□□ -1.46
SHANK2-201ENST00000338508 NBPF19A0A087WUL8 3843 aa5.93□□□□□ -1.46
SHANK2-201ENST00000338508 KRTAP12-2P59991 146 aa5.93□□□□□ -1.46
SHANK2-201ENST00000338508 LAMA5O15230 3695 aa5.91□□□□□ -1.46
SHANK2-201ENST00000338508 TENM3Q9P273 2699 aa5.89□□□□□ -1.47
SHANK2-201ENST00000338508 TGP01266 2768 aa5.88□□□□□ -1.47
SHANK2-201ENST00000338508 CSMD1Q96PZ7 3565 aa5.88□□□□□ -1.47
SHANK2-201ENST00000338508 NIPBLQ6KC79 2804 aaeCLIP5.86□□□□□ -1.47
SHANK2-201ENST00000338508 TENM2Q9NT68 2774 aa5.83□□□□□ -1.48
SHANK2-201ENST00000338508 PDZD2O15018 2839 aa5.83□□□□□ -1.48
SHANK2-201ENST00000338508 CRCT1Q9UGL9 99 aa5.83□□□□□ -1.48
SHANK2-201ENST00000338508 PKD1L1Q8TDX9 2849 aa5.82□□□□□ -1.48
SHANK2-201ENST00000338508 VWFP04275 2813 aa5.82□□□□□ -1.48
SHANK2-201ENST00000338508 KRTAP15-1Q3LI76 137 aa5.8□□□□□ -1.48
SHANK2-201ENST00000338508 FBN2P35556 2912 aa5.79□□□□□ -1.48
SHANK2-201ENST00000338508 ZANQ9Y493 2812 aa5.75□□□□□ -1.49
SHANK2-201ENST00000338508 RELNP78509 3460 aa5.75□□□□□ -1.49
SHANK2-201ENST00000338508 KRTAP13-4Q3LI77 160 aa5.73□□□□□ -1.49
SHANK2-201ENST00000338508 KRTAP12-1P59990 96 aa5.66□□□□□ -1.5
SHANK2-201ENST00000338508 SMG1Q96Q15 3661 aaKnown RBP5.61□□□□□ -1.51
SHANK2-201ENST00000338508 SPENQ96T58 3664 aaKnown RBP5.61□□□□□ -1.51
SHANK2-201ENST00000338508 ZFHX3Q15911 3703 aa5.59□□□□□ -1.51
SHANK2-201ENST00000338508 HRNRQ86YZ3 2850 aaPredicted RBP5.56□□□□□ -1.52
SHANK2-201ENST00000338508 DMDP11532 3685 aa5.55□□□□□ -1.52
SHANK2-201ENST00000338508 MXRA5Q9NR99 2828 aa5.54□□□□□ -1.52
SHANK2-201ENST00000338508 CUBNO60494 3623 aa5.52□□□□□ -1.53
SHANK2-201ENST00000338508 SVEP1Q4LDE5 3571 aa5.46□□□□□ -1.54
SHANK2-201ENST00000338508 SRRM2Q9UQ35 2752 aaKnown RBP5.46□□□□□ -1.54
SHANK2-201ENST00000338508 KRTAP3-1Q9BYR8 98 aa5.43□□□□□ -1.54
SHANK2-201ENST00000338508 COL7A1Q02388 2944 aa5.4□□□□□ -1.55
SHANK2-201ENST00000338508 KRTAP10-12P60413 245 aa5.39□□□□□ -1.55
SHANK2-201ENST00000338508 MEGF8Q7Z7M0 2845 aa5.36□□□□□ -1.55
SHANK2-201ENST00000338508 MUC3AQ02505 3323 aa5.33□□□□□ -1.56
SHANK2-201ENST00000338508 ANK3Q12955 4377 aaKnown RBP5.33□□□□□ -1.56
SHANK2-201ENST00000338508 OTOGQ6ZRI0 2925 aa5.29□□□□□ -1.56
SHANK2-201ENST00000338508 KRTAP10-6P60371 365 aaPredicted RBP5.28□□□□□ -1.56
SHANK2-201ENST00000338508 FBN3Q75N90 2809 aa5.27□□□□□ -1.57
SHANK2-201ENST00000338508 CSMD2Q7Z408 3487 aa5.27□□□□□ -1.57
SHANK2-201ENST00000338508 INE1O15225 51 aa5.26□□□□□ -1.57
SHANK2-201ENST00000338508 KRTAP10-5P60370 271 aa5.23□□□□□ -1.57
SHANK2-201ENST00000338508 FBN1P35555 2871 aaKnown RBP5.23□□□□□ -1.57
SHANK2-201ENST00000338508 KRTAP4-5Q9BYR2 181 aa5.22□□□□□ -1.57
SHANK2-201ENST00000338508 VPS13CQ709C8 3753 aa5.21□□□□□ -1.58
SHANK2-201ENST00000338508 TRRAPQ9Y4A5 3859 aa5.2□□□□□ -1.58
SHANK2-201ENST00000338508 CSMD3Q7Z407 3707 aa5.2□□□□□ -1.58
SHANK2-201ENST00000338508 KRTAP12-3P60328 96 aa5.19□□□□□ -1.58
SHANK2-201ENST00000338508 LORP23490 312 aaPredicted RBP5.16□□□□□ -1.58
SHANK2-201ENST00000338508 LCE3AQ5TA76 89 aa5.16□□□□□ -1.58
SHANK2-201ENST00000338508 HUWE1Q7Z6Z7 4374 aaKnown RBP5.11□□□□□ -1.59
SHANK2-201ENST00000338508 MT1HL1P0DM35 61 aa5.11□□□□□ -1.59
SHANK2-201ENST00000338508 KRTAP8-1Q8IUC2 63 aa5.08□□□□□ -1.6
SHANK2-201ENST00000338508 KRTAP3-3Q9BYR6 98 aa5.05□□□□□ -1.6
SHANK2-201ENST00000338508 BSNQ9UPA5 3926 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms