RNA–Protein interactions for RNA: ENST00000338502.8

SPRED3-201, Transcript of sprouty related EVH1 domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPRED3, Length 4,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRED3-201ENST00000338502 DCHS1Q96JQ0 3298 aa10.45□□□□□ -0.74
SPRED3-201ENST00000338502 CFAP47Q6ZTR5 3102 aa10.44□□□□□ -0.74
SPRED3-201ENST00000338502 Q6ZRN7 208 aaPredicted RBP10.43□□□□□ -0.74
SPRED3-201ENST00000338502 Q5VSD8 79 aa10.43□□□□□ -0.74
SPRED3-201ENST00000338502 DCHS2Q6V1P9 2916 aa10.43□□□□□ -0.74
SPRED3-201ENST00000338502 ASPMQ8IZT6 3477 aa10.43□□□□□ -0.74
SPRED3-201ENST00000338502 ASB16-AS1Q495Z4 193 aa10.42□□□□□ -0.74
SPRED3-201ENST00000338502 NOTCH2NLQ7Z3S9 236 aa10.42□□□□□ -0.74
SPRED3-201ENST00000338502 RPL37P61927 97 aaKnown RBP10.41□□□□□ -0.74
SPRED3-201ENST00000338502 R4GN34 69 aa10.4□□□□□ -0.74
SPRED3-201ENST00000338502 ZFHX4Q86UP3 3567 aa10.4□□□□□ -0.74
SPRED3-201ENST00000338502 SEC61BP60468 96 aaKnown RBP10.39□□□□□ -0.75
SPRED3-201ENST00000338502 DMDP11532 3685 aa10.39□□□□□ -0.75
SPRED3-201ENST00000338502 H1FX-AS1Q4G0G2 97 aa10.35□□□□□ -0.75
SPRED3-201ENST00000338502 M0R2T5 61 aa10.34□□□□□ -0.75
SPRED3-201ENST00000338502 KRTAP13-1Q8IUC0 172 aa10.31□□□□□ -0.76
SPRED3-201ENST00000338502 NF1P21359 2839 aa10.27□□□□□ -0.76
SPRED3-201ENST00000338502 RPS29P62273 56 aaKnown RBP10.27□□□□□ -0.77
SPRED3-201ENST00000338502 ROMO1P60602 79 aa10.27□□□□□ -0.77
SPRED3-201ENST00000338502 SPATA8Q6RVD6 105 aa10.25□□□□□ -0.77
SPRED3-201ENST00000338502 CRYBG3Q68DQ2 2970 aa10.24□□□□□ -0.77
SPRED3-201ENST00000338502 MUC3AQ02505 3323 aa10.23□□□□□ -0.77
SPRED3-201ENST00000338502 FBN2P35556 2912 aa10.19□□□□□ -0.78
SPRED3-201ENST00000338502 M0QZ58 72 aa10.19□□□□□ -0.78
SPRED3-201ENST00000338502 KRTAP13-2Q52LG2 175 aa10.19□□□□□ -0.78
SPRED3-201ENST00000338502 SMG1Q96Q15 3661 aaKnown RBP10.17□□□□□ -0.78
SPRED3-201ENST00000338502 TENM3Q9P273 2699 aa10.16□□□□□ -0.78
SPRED3-201ENST00000338502 HRNRQ86YZ3 2850 aaPredicted RBP10.15□□□□□ -0.78
SPRED3-201ENST00000338502 DMXL1Q9Y485 3027 aa10.14□□□□□ -0.79
SPRED3-201ENST00000338502 TNRC18O15417 2968 aaPredicted RBP10.13□□□□□ -0.79
SPRED3-201ENST00000338502 ADM2Q7Z4H4 148 aa10.11□□□□□ -0.79
SPRED3-201ENST00000338502 LAMA5O15230 3695 aa10.1□□□□□ -0.79
SPRED3-201ENST00000338502 CSMD1Q96PZ7 3565 aa10.09□□□□□ -0.79
SPRED3-201ENST00000338502 A6NN06 94 aa10.07□□□□□ -0.8
SPRED3-201ENST00000338502 A0A0A0MQY5 61 aa9.98□□□□□ -0.81
SPRED3-201ENST00000338502 TENM1Q9UKZ4 2725 aa9.94□□□□□ -0.82
SPRED3-201ENST00000338502 A8MU10 97 aa9.94□□□□□ -0.82
SPRED3-201ENST00000338502 SPENQ96T58 3664 aaKnown RBP9.93□□□□□ -0.82
SPRED3-201ENST00000338502 MXRA5Q9NR99 2828 aa9.93□□□□□ -0.82
SPRED3-201ENST00000338502 RELNP78509 3460 aa9.91□□□□□ -0.82
SPRED3-201ENST00000338502 SVEP1Q4LDE5 3571 aa9.89□□□□□ -0.83
SPRED3-201ENST00000338502 A8MUU9 505 aa9.88□□□□□ -0.83
SPRED3-201ENST00000338502 KRTAP25-1Q3LHN0 102 aa9.88□□□□□ -0.83
SPRED3-201ENST00000338502 C20orf166-AS1Q96NR2 134 aa9.84□□□□□ -0.83
SPRED3-201ENST00000338502 PLAC4Q8WY50 150 aa9.84□□□□□ -0.83
SPRED3-201ENST00000338502 KRTAP21-3Q3LHN1 58 aa9.82□□□□□ -0.84
SPRED3-201ENST00000338502 CELSR1Q9NYQ6 3014 aa9.8□□□□□ -0.84
SPRED3-201ENST00000338502 KRTAP1-4P0C5Y4 121 aa9.76□□□□□ -0.85
SPRED3-201ENST00000338502 PKD1L1Q8TDX9 2849 aa9.69□□□□□ -0.86
SPRED3-201ENST00000338502 TENM2Q9NT68 2774 aa9.64□□□□□ -0.87
SPRED3-201ENST00000338502 TGP01266 2768 aa9.62□□□□□ -0.87
SPRED3-201ENST00000338502 PDZD2O15018 2839 aa9.62□□□□□ -0.87
SPRED3-201ENST00000338502 CUBNO60494 3623 aa9.59□□□□□ -0.87
SPRED3-201ENST00000338502 KRTAP16-1A8MUX0 517 aa9.56□□□□□ -0.88
SPRED3-201ENST00000338502 XP32Q5T750 250 aa9.53□□□□□ -0.88
SPRED3-201ENST00000338502 VWFP04275 2813 aa9.48□□□□□ -0.89
SPRED3-201ENST00000338502 TNP1P09430 55 aa9.47□□□□□ -0.89
SPRED3-201ENST00000338502 NDUFAF8A1L188 74 aa9.46□□□□□ -0.9
SPRED3-201ENST00000338502 H0YAA0 97 aa9.43□□□□□ -0.9
SPRED3-201ENST00000338502 FBN1P35555 2871 aaKnown RBP9.4□□□□□ -0.9
SPRED3-201ENST00000338502 BSNQ9UPA5 3926 aa9.36□□□□□ -0.91
SPRED3-201ENST00000338502 TPRXLQ17RH7 258 aa9.35□□□□□ -0.91
SPRED3-201ENST00000338502 KRTAP13-3Q3SY46 172 aa9.32□□□□□ -0.92
SPRED3-201ENST00000338502 PP632Q6XCG6 107 aa9.31□□□□□ -0.92
SPRED3-201ENST00000338502 C10orf95Q9H7T3 257 aa9.27□□□□□ -0.93
SPRED3-201ENST00000338502 ZFHX3Q15911 3703 aa9.27□□□□□ -0.93
SPRED3-201ENST00000338502 SRRM2Q9UQ35 2752 aaKnown RBP9.27□□□□□ -0.93
SPRED3-201ENST00000338502 CSMD2Q7Z408 3487 aa9.2□□□□□ -0.94
SPRED3-201ENST00000338502 P0C880 135 aa9.19□□□□□ -0.94
SPRED3-201ENST00000338502 OTOGQ6ZRI0 2925 aa9.19□□□□□ -0.94
SPRED3-201ENST00000338502 VPS13CQ709C8 3753 aa9.15□□□□□ -0.95
SPRED3-201ENST00000338502 KRTAP10-8P60410 259 aa9.14□□□□□ -0.95
SPRED3-201ENST00000338502 A0A1B0GVY2 172 aa9.09□□□□□ -0.95
SPRED3-201ENST00000338502 FBN3Q75N90 2809 aa9.06□□□□□ -0.96
SPRED3-201ENST00000338502 KRTAP10-10P60014 251 aa8.94□□□□□ -0.98
SPRED3-201ENST00000338502 MEGF8Q7Z7M0 2845 aa8.89□□□□□ -0.99
SPRED3-201ENST00000338502 COL7A1Q02388 2944 aa8.87□□□□□ -0.99
SPRED3-201ENST00000338502 NBPF19A0A087WUL8 3843 aa8.85□□□□□ -0.99
SPRED3-201ENST00000338502 KRTAP3-1Q9BYR8 98 aa8.82□□□□□ -1
SPRED3-201ENST00000338502 KRTAP12-2P59991 146 aa8.8□□□□□ -1
SPRED3-201ENST00000338502 PRO2289Q9P1D8 64 aa8.8□□□□□ -1
SPRED3-201ENST00000338502 KRTAP12-1P59990 96 aa8.73□□□□□ -1.01
SPRED3-201ENST00000338502 KRTAP13-4Q3LI77 160 aa8.65□□□□□ -1.02
SPRED3-201ENST00000338502 KRTAP10-6P60371 365 aaPredicted RBP8.58□□□□□ -1.04
SPRED3-201ENST00000338502 ANK3Q12955 4377 aaKnown RBP8.55□□□□□ -1.04
SPRED3-201ENST00000338502 TRRAPQ9Y4A5 3859 aa8.55□□□□□ -1.04
SPRED3-201ENST00000338502 ZNF469Q96JG9 3925 aaPredicted RBP8.54□□□□□ -1.04
SPRED3-201ENST00000338502 AKAP9Q99996 3911 aa8.54□□□□□ -1.04
SPRED3-201ENST00000338502 MT1HL1P0DM35 61 aa8.37□□□□□ -1.07
SPRED3-201ENST00000338502 KRTAP3-2Q9BYR7 98 aa8.29□□□□□ -1.08
SPRED3-201ENST00000338502 KRTAP3-3Q9BYR6 98 aa8.27□□□□□ -1.08
SPRED3-201ENST00000338502 KRTAP10-4P60372 401 aaPredicted RBP8.25□□□□□ -1.09
SPRED3-201ENST00000338502 CSMD3Q7Z407 3707 aa8.16□□□□□ -1.1
SPRED3-201ENST00000338502 KRTAP15-1Q3LI76 137 aa8.12□□□□□ -1.11
SPRED3-201ENST00000338502 HUWE1Q7Z6Z7 4374 aaKnown RBP8.03□□□□□ -1.12
SPRED3-201ENST00000338502 KRTAP4-5Q9BYR2 181 aa7.94□□□□□ -1.14
SPRED3-201ENST00000338502 KRTAP10-12P60413 245 aa7.85□□□□□ -1.15
SPRED3-201ENST00000338502 KRTAP23-1A1A580 65 aa7.79□□□□□ -1.16
SPRED3-201ENST00000338502 DNAH10Q8IVF4 4471 aa7.78□□□□□ -1.16
SPRED3-201ENST00000338502 DNAH5Q8TE73 4624 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms