RNA–Protein interactions for RNA: ENST00000338146.6

SPRYD4-201, Transcript of SPRY domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPRYD4, Length 10,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRYD4-201ENST00000338146 Q6ZRN7 208 aaPredicted RBP4.38□□□□□ -1.71
SPRYD4-201ENST00000338146 COL12A1Q99715 3063 aa4.38□□□□□ -1.71
SPRYD4-201ENST00000338146 DMXL2Q8TDJ6 3036 aa4.36□□□□□ -1.71
SPRYD4-201ENST00000338146 NIPBLQ6KC79 2804 aaeCLIP4.34□□□□□ -1.72
SPRYD4-201ENST00000338146 WDFY4Q6ZS81 3184 aa4.33□□□□□ -1.72
SPRYD4-201ENST00000338146 VPS13AQ96RL7 3174 aa4.32□□□□□ -1.72
SPRYD4-201ENST00000338146 PRO2289Q9P1D8 64 aa4.31□□□□□ -1.72
SPRYD4-201ENST00000338146 RANBP2P49792 3224 aaKnown RBP4.31□□□□□ -1.72
SPRYD4-201ENST00000338146 KRTAP13-1Q8IUC0 172 aa4.3□□□□□ -1.72
SPRYD4-201ENST00000338146 TACC2O95359 2948 aa4.3□□□□□ -1.72
SPRYD4-201ENST00000338146 NBEAQ8NFP9 2946 aa4.29□□□□□ -1.72
SPRYD4-201ENST00000338146 XIRP2A4UGR9 3374 aa4.29□□□□□ -1.72
SPRYD4-201ENST00000338146 PDZD2O15018 2839 aa4.29□□□□□ -1.72
SPRYD4-201ENST00000338146 SRRM2Q9UQ35 2752 aaKnown RBP4.28□□□□□ -1.72
SPRYD4-201ENST00000338146 REV3LO60673 3130 aa4.27□□□□□ -1.73
SPRYD4-201ENST00000338146 KRTAP10-10P60014 251 aa4.26□□□□□ -1.73
SPRYD4-201ENST00000338146 TNRC18O15417 2968 aaPredicted RBP4.26□□□□□ -1.73
SPRYD4-201ENST00000338146 ZZEF1O43149 2961 aa4.23□□□□□ -1.73
SPRYD4-201ENST00000338146 DCHS2Q6V1P9 2916 aa4.22□□□□□ -1.73
SPRYD4-201ENST00000338146 CELSR3Q9NYQ7 3312 aa4.22□□□□□ -1.73
SPRYD4-201ENST00000338146 LAMA1P25391 3075 aa4.21□□□□□ -1.73
SPRYD4-201ENST00000338146 XP32Q5T750 250 aa4.21□□□□□ -1.74
SPRYD4-201ENST00000338146 VWFP04275 2813 aa4.21□□□□□ -1.74
SPRYD4-201ENST00000338146 TENM4Q6N022 2769 aa4.19□□□□□ -1.74
SPRYD4-201ENST00000338146 KRTAP12-2P59991 146 aa4.17□□□□□ -1.74
SPRYD4-201ENST00000338146 HTTP42858 3142 aa4.17□□□□□ -1.74
SPRYD4-201ENST00000338146 ZANQ9Y493 2812 aa4.16□□□□□ -1.74
SPRYD4-201ENST00000338146 CELSR1Q9NYQ6 3014 aa4.15□□□□□ -1.74
SPRYD4-201ENST00000338146 FBN2P35556 2912 aa4.15□□□□□ -1.75
SPRYD4-201ENST00000338146 PKD1L1Q8TDX9 2849 aa4.15□□□□□ -1.75
SPRYD4-201ENST00000338146 MKI67P46013 3256 aaKnown RBP4.15□□□□□ -1.75
SPRYD4-201ENST00000338146 ATMQ13315 3056 aa4.12□□□□□ -1.75
SPRYD4-201ENST00000338146 TPRXLQ17RH7 258 aa4.12□□□□□ -1.75
SPRYD4-201ENST00000338146 COL6A3P12111 3177 aa4.12□□□□□ -1.75
SPRYD4-201ENST00000338146 UNC80Q8N2C7 3258 aa4.12□□□□□ -1.75
SPRYD4-201ENST00000338146 BOD1L1Q8NFC6 3051 aa4.11□□□□□ -1.75
SPRYD4-201ENST00000338146 DNAH14Q0VDD8 3507 aa4.09□□□□□ -1.76
SPRYD4-201ENST00000338146 ADGRG4Q8IZF6 3080 aa4.08□□□□□ -1.76
SPRYD4-201ENST00000338146 KRTAP1-4P0C5Y4 121 aa4.07□□□□□ -1.76
SPRYD4-201ENST00000338146 DMXL1Q9Y485 3027 aa4.06□□□□□ -1.76
SPRYD4-201ENST00000338146 CFAP47Q6ZTR5 3102 aa4.06□□□□□ -1.76
SPRYD4-201ENST00000338146 KRTAP15-1Q3LI76 137 aa4.05□□□□□ -1.76
SPRYD4-201ENST00000338146 KRTAP13-4Q3LI77 160 aa4.05□□□□□ -1.76
SPRYD4-201ENST00000338146 TENM2Q9NT68 2774 aa4.04□□□□□ -1.76
SPRYD4-201ENST00000338146 MXRA5Q9NR99 2828 aa4.04□□□□□ -1.76
SPRYD4-201ENST00000338146 USP34Q70CQ2 3546 aa4.03□□□□□ -1.76
SPRYD4-201ENST00000338146 LAMA3Q16787 3333 aa4.03□□□□□ -1.76
SPRYD4-201ENST00000338146 VCANP13611 3396 aa4□□□□□ -1.77
SPRYD4-201ENST00000338146 HRNRQ86YZ3 2850 aaPredicted RBP3.99□□□□□ -1.77
SPRYD4-201ENST00000338146 KRTAP12-1P59990 96 aa3.98□□□□□ -1.77
SPRYD4-201ENST00000338146 KRTAP13-3Q3SY46 172 aa3.97□□□□□ -1.77
SPRYD4-201ENST00000338146 INE1O15225 51 aa3.95□□□□□ -1.78
SPRYD4-201ENST00000338146 SPEGQ15772 3267 aa3.95□□□□□ -1.78
SPRYD4-201ENST00000338146 BRCA2P51587 3418 aa3.95□□□□□ -1.78
SPRYD4-201ENST00000338146 COL7A1Q02388 2944 aa3.94□□□□□ -1.78
SPRYD4-201ENST00000338146 ZFHX4Q86UP3 3567 aa3.92□□□□□ -1.78
SPRYD4-201ENST00000338146 SPTBN5Q9NRC6 3674 aaKnown RBP3.92□□□□□ -1.78
SPRYD4-201ENST00000338146 CRCT1Q9UGL9 99 aa3.92□□□□□ -1.78
SPRYD4-201ENST00000338146 MEGF8Q7Z7M0 2845 aa3.88□□□□□ -1.79
SPRYD4-201ENST00000338146 FBN3Q75N90 2809 aa3.85□□□□□ -1.79
SPRYD4-201ENST00000338146 SZT2Q5T011 3432 aa3.85□□□□□ -1.79
SPRYD4-201ENST00000338146 ZFHX3Q15911 3703 aa3.83□□□□□ -1.8
SPRYD4-201ENST00000338146 NBPF19A0A087WUL8 3843 aa3.82□□□□□ -1.8
SPRYD4-201ENST00000338146 CDH23Q9H251 3354 aa3.82□□□□□ -1.8
SPRYD4-201ENST00000338146 KRTAP3-1Q9BYR8 98 aa3.8□□□□□ -1.8
SPRYD4-201ENST00000338146 WDFY3Q8IZQ1 3526 aa3.78□□□□□ -1.8
SPRYD4-201ENST00000338146 MYO15AQ9UKN7 3530 aa3.77□□□□□ -1.81
SPRYD4-201ENST00000338146 SMG1Q96Q15 3661 aaKnown RBP3.74□□□□□ -1.81
SPRYD4-201ENST00000338146 KRTAP10-6P60371 365 aaPredicted RBP3.73□□□□□ -1.81
SPRYD4-201ENST00000338146 KRTAP10-12P60413 245 aa3.72□□□□□ -1.81
SPRYD4-201ENST00000338146 LAMA5O15230 3695 aa3.7□□□□□ -1.82
SPRYD4-201ENST00000338146 ASPMQ8IZT6 3477 aa3.7□□□□□ -1.82
SPRYD4-201ENST00000338146 LOC400499M0QZD8 3231 aa3.7□□□□□ -1.82
SPRYD4-201ENST00000338146 DMDP11532 3685 aa3.7□□□□□ -1.82
SPRYD4-201ENST00000338146 EYSQ5T1H1 3165 aa3.69□□□□□ -1.82
SPRYD4-201ENST00000338146 KRTAP21-3Q3LHN1 58 aa3.69□□□□□ -1.82
SPRYD4-201ENST00000338146 OTOGQ6ZRI0 2925 aa3.69□□□□□ -1.82
SPRYD4-201ENST00000338146 FBN1P35555 2871 aaKnown RBP3.68□□□□□ -1.82
SPRYD4-201ENST00000338146 SPENQ96T58 3664 aaKnown RBP3.67□□□□□ -1.82
SPRYD4-201ENST00000338146 KRTAP10-5P60370 271 aa3.62□□□□□ -1.83
SPRYD4-201ENST00000338146 KRTAP12-3P60328 96 aa3.6□□□□□ -1.83
SPRYD4-201ENST00000338146 CSMD1Q96PZ7 3565 aa3.6□□□□□ -1.83
SPRYD4-201ENST00000338146 KRTAP3-2Q9BYR7 98 aa3.58□□□□□ -1.84
SPRYD4-201ENST00000338146 RELNP78509 3460 aa3.58□□□□□ -1.84
SPRYD4-201ENST00000338146 LCE3AQ5TA76 89 aa3.55□□□□□ -1.84
SPRYD4-201ENST00000338146 VPS13CQ709C8 3753 aa3.53□□□□□ -1.84
SPRYD4-201ENST00000338146 KRTAP3-3Q9BYR6 98 aa3.53□□□□□ -1.85
SPRYD4-201ENST00000338146 DCHS1Q96JQ0 3298 aa3.5□□□□□ -1.85
SPRYD4-201ENST00000338146 TRRAPQ9Y4A5 3859 aa3.47□□□□□ -1.85
SPRYD4-201ENST00000338146 CSMD3Q7Z407 3707 aa3.46□□□□□ -1.86
SPRYD4-201ENST00000338146 AKAP9Q99996 3911 aa3.43□□□□□ -1.86
SPRYD4-201ENST00000338146 KRTAP23-1A1A580 65 aa3.42□□□□□ -1.86
SPRYD4-201ENST00000338146 LORP23490 312 aaPredicted RBP3.41□□□□□ -1.86
SPRYD4-201ENST00000338146 ALMS1Q8TCU4 4167 aa3.4□□□□□ -1.86
SPRYD4-201ENST00000338146 CUBNO60494 3623 aa3.39□□□□□ -1.87
SPRYD4-201ENST00000338146 KRTAP8-1Q8IUC2 63 aa3.38□□□□□ -1.87
SPRYD4-201ENST00000338146 SVEP1Q4LDE5 3571 aa3.34□□□□□ -1.88
SPRYD4-201ENST00000338146 MT1HL1P0DM35 61 aa3.33□□□□□ -1.88
SPRYD4-201ENST00000338146 KRTAP4-5Q9BYR2 181 aa3.3□□□□□ -1.88
SPRYD4-201ENST00000338146 BSNQ9UPA5 3926 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms