RNA–Protein interactions for RNA: ENST00000336292.10

SYNM-202, Transcript of synemin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNM, Length 7,394 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-202ENST00000336292 ROMO1P60602 79 aa10.33□□□□□ -0.76
SYNM-202ENST00000336292 DMXL1Q9Y485 3027 aa10.32□□□□□ -0.76
SYNM-202ENST00000336292 SPRR1BP22528 89 aa10.31□□□□□ -0.76
SYNM-202ENST00000336292 LAMA5O15230 3695 aa10.31□□□□□ -0.76
SYNM-202ENST00000336292 KMT2BQ9UMN6 2715 aaPredicted RBP10.29□□□□□ -0.76
SYNM-202ENST00000336292 CYSTM1Q9H1C7 97 aa10.29□□□□□ -0.76
SYNM-202ENST00000336292 NSD1Q96L73 2696 aaPredicted RBP10.28□□□□□ -0.76
SYNM-202ENST00000336292 LINC01558Q9Y6Z2 57 aa10.27□□□□□ -0.76
SYNM-202ENST00000336292 HIVEP1P15822 2718 aa10.26□□□□□ -0.77
SYNM-202ENST00000336292 TNRC18O15417 2968 aaPredicted RBP10.26□□□□□ -0.77
SYNM-202ENST00000336292 NBEAQ8NFP9 2946 aa10.21□□□□□ -0.78
SYNM-202ENST00000336292 A8MU10 97 aa10.2□□□□□ -0.78
SYNM-202ENST00000336292 Q5VV11 94 aa10.2□□□□□ -0.78
SYNM-202ENST00000336292 ITPR1Q14643 2758 aa10.18□□□□□ -0.78
SYNM-202ENST00000336292 A0A0A0MQY5 61 aa10.17□□□□□ -0.78
SYNM-202ENST00000336292 Q6ZRN7 208 aaPredicted RBP10.15□□□□□ -0.78
SYNM-202ENST00000336292 KRTAP13-2Q52LG2 175 aa10.13□□□□□ -0.79
SYNM-202ENST00000336292 RELNP78509 3460 aa10.11□□□□□ -0.79
SYNM-202ENST00000336292 ZFHX4Q86UP3 3567 aa10.09□□□□□ -0.79
SYNM-202ENST00000336292 CELSR2Q9HCU4 2923 aa10.08□□□□□ -0.8
SYNM-202ENST00000336292 KRTAP4-16G5E9R7 235 aaPredicted RBP10.08□□□□□ -0.8
SYNM-202ENST00000336292 KRTAP10-8P60410 259 aa10.07□□□□□ -0.8
SYNM-202ENST00000336292 H3BS24 57 aa10.06□□□□□ -0.8
SYNM-202ENST00000336292 CSMD1Q96PZ7 3565 aa10.03□□□□□ -0.8
SYNM-202ENST00000336292 KRTAP7-1Q8IUC3 87 aa9.96□□□□□ -0.81
SYNM-202ENST00000336292 FLNCQ14315 2725 aa9.96□□□□□ -0.81
SYNM-202ENST00000336292 Q5XG85 94 aa9.94□□□□□ -0.82
SYNM-202ENST00000336292 KRTAP10-10P60014 251 aa9.93□□□□□ -0.82
SYNM-202ENST00000336292 C10orf95Q9H7T3 257 aa9.91□□□□□ -0.82
SYNM-202ENST00000336292 DMDP11532 3685 aa9.9□□□□□ -0.82
SYNM-202ENST00000336292 KRTAP21-3Q3LHN1 58 aa9.89□□□□□ -0.83
SYNM-202ENST00000336292 TENM4Q6N022 2769 aa9.88□□□□□ -0.83
SYNM-202ENST00000336292 TNP1P09430 55 aa9.87□□□□□ -0.83
SYNM-202ENST00000336292 DCHS2Q6V1P9 2916 aa9.87□□□□□ -0.83
SYNM-202ENST00000336292 CELSR1Q9NYQ6 3014 aa9.86□□□□□ -0.83
SYNM-202ENST00000336292 KRTAP29-1A8MX34 341 aaPredicted RBP9.84□□□□□ -0.83
SYNM-202ENST00000336292 ZFHX3Q15911 3703 aa9.83□□□□□ -0.84
SYNM-202ENST00000336292 RPS29P62273 56 aaKnown RBP9.83□□□□□ -0.84
SYNM-202ENST00000336292 TENM1Q9UKZ4 2725 aa9.82□□□□□ -0.84
SYNM-202ENST00000336292 SPENQ96T58 3664 aaKnown RBP9.81□□□□□ -0.84
SYNM-202ENST00000336292 ASB16-AS1Q495Z4 193 aa9.74□□□□□ -0.85
SYNM-202ENST00000336292 XP32Q5T750 250 aa9.74□□□□□ -0.85
SYNM-202ENST00000336292 KRTAP13-1Q8IUC0 172 aa9.67□□□□□ -0.86
SYNM-202ENST00000336292 FBN2P35556 2912 aa9.67□□□□□ -0.86
SYNM-202ENST00000336292 SMG1Q96Q15 3661 aaKnown RBP9.66□□□□□ -0.86
SYNM-202ENST00000336292 CUBNO60494 3623 aa9.65□□□□□ -0.86
SYNM-202ENST00000336292 NF1P21359 2839 aa9.64□□□□□ -0.87
SYNM-202ENST00000336292 NIPBLQ6KC79 2804 aaeCLIP9.61□□□□□ -0.87
SYNM-202ENST00000336292 PKD1L1Q8TDX9 2849 aa9.6□□□□□ -0.87
SYNM-202ENST00000336292 TENM2Q9NT68 2774 aa9.6□□□□□ -0.87
SYNM-202ENST00000336292 SVEP1Q4LDE5 3571 aa9.57□□□□□ -0.88
SYNM-202ENST00000336292 ZANQ9Y493 2812 aa9.55□□□□□ -0.88
SYNM-202ENST00000336292 KRTAP25-1Q3LHN0 102 aa9.55□□□□□ -0.88
SYNM-202ENST00000336292 VWFP04275 2813 aa9.54□□□□□ -0.88
SYNM-202ENST00000336292 NDUFAF8A1L188 74 aa9.5□□□□□ -0.89
SYNM-202ENST00000336292 KRTAP1-4P0C5Y4 121 aa9.48□□□□□ -0.89
SYNM-202ENST00000336292 PRO2289Q9P1D8 64 aa9.47□□□□□ -0.89
SYNM-202ENST00000336292 CSMD2Q7Z408 3487 aa9.45□□□□□ -0.9
SYNM-202ENST00000336292 TPRXLQ17RH7 258 aa9.43□□□□□ -0.9
SYNM-202ENST00000336292 KRTAP16-1A8MUX0 517 aa9.43□□□□□ -0.9
SYNM-202ENST00000336292 HRNRQ86YZ3 2850 aaPredicted RBP9.42□□□□□ -0.9
SYNM-202ENST00000336292 MUC3AQ02505 3323 aa9.38□□□□□ -0.91
SYNM-202ENST00000336292 TENM3Q9P273 2699 aa9.32□□□□□ -0.92
SYNM-202ENST00000336292 KRTAP13-3Q3SY46 172 aa9.27□□□□□ -0.93
SYNM-202ENST00000336292 P0C880 135 aa9.21□□□□□ -0.93
SYNM-202ENST00000336292 A6NN06 94 aa9.19□□□□□ -0.94
SYNM-202ENST00000336292 MXRA5Q9NR99 2828 aa9.17□□□□□ -0.94
SYNM-202ENST00000336292 PDZD2O15018 2839 aa9.13□□□□□ -0.95
SYNM-202ENST00000336292 H0YAA0 97 aa9.11□□□□□ -0.95
SYNM-202ENST00000336292 TGP01266 2768 aa9.1□□□□□ -0.95
SYNM-202ENST00000336292 VPS13CQ709C8 3753 aa9.03□□□□□ -0.96
SYNM-202ENST00000336292 TRRAPQ9Y4A5 3859 aa9.03□□□□□ -0.96
SYNM-202ENST00000336292 PP632Q6XCG6 107 aa9.01□□□□□ -0.97
SYNM-202ENST00000336292 BSNQ9UPA5 3926 aa9□□□□□ -0.97
SYNM-202ENST00000336292 CRCT1Q9UGL9 99 aa8.95□□□□□ -0.98
SYNM-202ENST00000336292 CSMD3Q7Z407 3707 aa8.9□□□□□ -0.99
SYNM-202ENST00000336292 FBN1P35555 2871 aaKnown RBP8.87□□□□□ -0.99
SYNM-202ENST00000336292 KRTAP12-2P59991 146 aa8.82□□□□□ -1
SYNM-202ENST00000336292 SRRM2Q9UQ35 2752 aaKnown RBP8.82□□□□□ -1
SYNM-202ENST00000336292 COL7A1Q02388 2944 aa8.79□□□□□ -1
SYNM-202ENST00000336292 MEGF8Q7Z7M0 2845 aa8.76□□□□□ -1.01
SYNM-202ENST00000336292 ANK3Q12955 4377 aaKnown RBP8.75□□□□□ -1.01
SYNM-202ENST00000336292 KRTAP15-1Q3LI76 137 aa8.65□□□□□ -1.02
SYNM-202ENST00000336292 KRTAP4-5Q9BYR2 181 aa8.63□□□□□ -1.03
SYNM-202ENST00000336292 FBN3Q75N90 2809 aa8.53□□□□□ -1.04
SYNM-202ENST00000336292 KRTAP13-4Q3LI77 160 aa8.47□□□□□ -1.05
SYNM-202ENST00000336292 OTOGQ6ZRI0 2925 aa8.46□□□□□ -1.06
SYNM-202ENST00000336292 AKAP9Q99996 3911 aa8.45□□□□□ -1.06
SYNM-202ENST00000336292 ZNF469Q96JG9 3925 aaPredicted RBP8.45□□□□□ -1.06
SYNM-202ENST00000336292 KRTAP12-1P59990 96 aa8.44□□□□□ -1.06
SYNM-202ENST00000336292 HUWE1Q7Z6Z7 4374 aaKnown RBP8.43□□□□□ -1.06
SYNM-202ENST00000336292 KRTAP3-1Q9BYR8 98 aa8.3□□□□□ -1.08
SYNM-202ENST00000336292 LORP23490 312 aaPredicted RBP8.29□□□□□ -1.08
SYNM-202ENST00000336292 MT1HL1P0DM35 61 aa8.23□□□□□ -1.09
SYNM-202ENST00000336292 KRTAP10-12P60413 245 aa8.18□□□□□ -1.1
SYNM-202ENST00000336292 ALMS1Q8TCU4 4167 aa8.09□□□□□ -1.12
SYNM-202ENST00000336292 KRTAP10-6P60371 365 aaPredicted RBP7.95□□□□□ -1.14
SYNM-202ENST00000336292 KRTAP8-1Q8IUC2 63 aa7.92□□□□□ -1.14
SYNM-202ENST00000336292 LCE3AQ5TA76 89 aa7.83□□□□□ -1.16
SYNM-202ENST00000336292 KRTAP12-3P60328 96 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms