RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 BPY2O14599 106 aa9.72□□□□□ -0.85
SHOX-201ENST00000334060 MT1HL1P0DM35 61 aa9.72□□□□□ -0.85
SHOX-201ENST00000334060 SPRR1BP22528 89 aa9.7□□□□□ -0.86
SHOX-201ENST00000334060 A0A0U1RQV1 116 aa9.69□□□□□ -0.86
SHOX-201ENST00000334060 BRK1Q8WUW1 75 aa9.69□□□□□ -0.86
SHOX-201ENST00000334060 ZNF706Q9Y5V0 76 aaPredicted RBP9.69□□□□□ -0.86
SHOX-201ENST00000334060 MOBPQ13875 183 aa9.68□□□□□ -0.86
SHOX-201ENST00000334060 KRTAP10-8P60410 259 aa9.65□□□□□ -0.86
SHOX-201ENST00000334060 HERC1Q15751 4861 aa9.65□□□□□ -0.86
SHOX-201ENST00000334060 OCR1Q9BZK8 76 aa9.64□□□□□ -0.87
SHOX-201ENST00000334060 PRR15Q8IV56 129 aa9.63□□□□□ -0.87
SHOX-201ENST00000334060 SEC61GP60059 68 aa9.63□□□□□ -0.87
SHOX-201ENST00000334060 FAM229BQ4G0N7 80 aa9.63□□□□□ -0.87
SHOX-201ENST00000334060 TYMSOSQ8TAI1 123 aa9.62□□□□□ -0.87
SHOX-201ENST00000334060 Q8NBF4 154 aa9.61□□□□□ -0.87
SHOX-201ENST00000334060 Q1T7F1 81 aa9.6□□□□□ -0.87
SHOX-201ENST00000334060 DMBT1Q9UGM3 2413 aaPredicted RBP9.6□□□□□ -0.87
SHOX-201ENST00000334060 KRTAP29-1A8MX34 341 aaPredicted RBP9.59□□□□□ -0.87
SHOX-201ENST00000334060 IGKV4-1P06312 121 aa9.59□□□□□ -0.87
SHOX-201ENST00000334060 IGFL1Q6UW32 110 aa9.57□□□□□ -0.88
SHOX-201ENST00000334060 hDV103S1A0JD37 113 aa9.54□□□□□ -0.88
SHOX-201ENST00000334060 MPLKIPQ8TAP9 179 aa9.53□□□□□ -0.88
SHOX-201ENST00000334060 IGLV8-61A0A075B6I0 122 aa9.52□□□□□ -0.89
SHOX-201ENST00000334060 NDUFB1O75438 58 aa9.52□□□□□ -0.89
SHOX-201ENST00000334060 CYP4F30PQ9H0H9 118 aa9.52□□□□□ -0.89
SHOX-201ENST00000334060 J3QL48 77 aa9.51□□□□□ -0.89
SHOX-201ENST00000334060 PMAIP1Q13794 54 aa9.5□□□□□ -0.89
SHOX-201ENST00000334060 LINC00304Q8N9R0 145 aa9.5□□□□□ -0.89
SHOX-201ENST00000334060 A0A1W2PNM2 257 aa9.5□□□□□ -0.89
SHOX-201ENST00000334060 SSBP3-AS1Q7Z2R9 100 aa9.48□□□□□ -0.89
SHOX-201ENST00000334060 RETNLBQ9BQ08 111 aa9.46□□□□□ -0.89
SHOX-201ENST00000334060 ZCCHC13Q8WW36 166 aaKnown RBP9.46□□□□□ -0.9
SHOX-201ENST00000334060 C1orf64Q8NEQ6 169 aa9.41□□□□□ -0.9
SHOX-201ENST00000334060 LPAP08519 4548 aa9.4□□□□□ -0.91
SHOX-201ENST00000334060 A0A087WSZ3 146 aa9.39□□□□□ -0.91
SHOX-201ENST00000334060 H3BPC8 53 aa9.39□□□□□ -0.91
SHOX-201ENST00000334060 Q8N9L7 120 aa9.38□□□□□ -0.91
SHOX-201ENST00000334060 HMCN2Q8NDA2 5059 aa9.38□□□□□ -0.91
SHOX-201ENST00000334060 CD164Q04900 197 aa9.37□□□□□ -0.91
SHOX-201ENST00000334060 C4orf48Q5BLP8 95 aa9.37□□□□□ -0.91
SHOX-201ENST00000334060 SPANXA2-OT1Q8N9U9 137 aa9.35□□□□□ -0.91
SHOX-201ENST00000334060 SPINK1P00995 79 aa9.35□□□□□ -0.91
SHOX-201ENST00000334060 LIMD2Q9BT23 127 aa9.35□□□□□ -0.91
SHOX-201ENST00000334060 TRAV22A0A0B4J277 110 aa9.34□□□□□ -0.91
SHOX-201ENST00000334060 MP68P56378 58 aa9.33□□□□□ -0.92
SHOX-201ENST00000334060 DEFB116Q30KQ4 102 aa9.32□□□□□ -0.92
SHOX-201ENST00000334060 SPAG11AQ6PDA7 123 aa9.32□□□□□ -0.92
SHOX-201ENST00000334060 HCG22E2RYF7 251 aa9.3□□□□□ -0.92
SHOX-201ENST00000334060 Q96NJ1 140 aa9.29□□□□□ -0.92
SHOX-201ENST00000334060 DSCR10P59022 87 aa9.26□□□□□ -0.93
SHOX-201ENST00000334060 LRP2P98164 4655 aa9.26□□□□□ -0.93
SHOX-201ENST00000334060 RPS29P62273 56 aaKnown RBP9.24□□□□□ -0.93
SHOX-201ENST00000334060 NDUFS5O43920 106 aa9.24□□□□□ -0.93
SHOX-201ENST00000334060 PRR4Q16378 134 aa9.24□□□□□ -0.93
SHOX-201ENST00000334060 PSPHP1O15172 72 aa9.23□□□□□ -0.93
SHOX-201ENST00000334060 ATP11AUNQ6ZP68 121 aa9.22□□□□□ -0.93
SHOX-201ENST00000334060 KTN1-AS1Q86SY8 53 aa9.21□□□□□ -0.94
SHOX-201ENST00000334060 LINC00472Q9H8W2 130 aa9.21□□□□□ -0.94
SHOX-201ENST00000334060 K7EQZ3 153 aa9.2□□□□□ -0.94
SHOX-201ENST00000334060 LINC00208Q96KT6 92 aa9.2□□□□□ -0.94
SHOX-201ENST00000334060 Q5VV11 94 aa9.19□□□□□ -0.94
SHOX-201ENST00000334060 A8MUN3 132 aa9.19□□□□□ -0.94
SHOX-201ENST00000334060 ASB16-AS1Q495Z4 193 aa9.17□□□□□ -0.94
SHOX-201ENST00000334060 Q75L30 129 aa9.17□□□□□ -0.94
SHOX-201ENST00000334060 Q8N9P0 234 aaPredicted RBP9.17□□□□□ -0.94
SHOX-201ENST00000334060 LOC101927531A0A1B0GV80 90 aa9.16□□□□□ -0.94
SHOX-201ENST00000334060 IGLV7-46A0A075B6I9 117 aa9.15□□□□□ -0.95
SHOX-201ENST00000334060 CHKB-CPT1BH3BT56 60 aa9.14□□□□□ -0.95
SHOX-201ENST00000334060 C9orf92A6NGG3 77 aa9.13□□□□□ -0.95
SHOX-201ENST00000334060 NOTCH2NLQ7Z3S9 236 aa9.13□□□□□ -0.95
SHOX-201ENST00000334060 UBR4Q5T4S7 5183 aa9.12□□□□□ -0.95
SHOX-201ENST00000334060 H0Y9P7 68 aa9.1□□□□□ -0.95
SHOX-201ENST00000334060 KRTAP13-3Q3SY46 172 aa9.09□□□□□ -0.95
SHOX-201ENST00000334060 PRR15LQ9BU68 103 aa9.07□□□□□ -0.96
SHOX-201ENST00000334060 CDC42SE1Q9NRR8 79 aa9.07□□□□□ -0.96
SHOX-201ENST00000334060 CASC2Q6XLA1 102 aa9.06□□□□□ -0.96
SHOX-201ENST00000334060 IGHV6-1A0A0B4J1U7 121 aa9.04□□□□□ -0.96
SHOX-201ENST00000334060 A6NED7 52 aa9.03□□□□□ -0.96
SHOX-201ENST00000334060 A8MWP4 228 aa9.03□□□□□ -0.96
SHOX-201ENST00000334060 WFDC13Q8IUB5 93 aa9.03□□□□□ -0.96
SHOX-201ENST00000334060 TP53AIP1Q9HCN2 124 aa9.03□□□□□ -0.96
SHOX-201ENST00000334060 LINC01558Q9Y6Z2 57 aa9.02□□□□□ -0.97
SHOX-201ENST00000334060 A6NN06 94 aa9.01□□□□□ -0.97
SHOX-201ENST00000334060 RBM12B-AS1Q9P1G2 102 aa9.01□□□□□ -0.97
SHOX-201ENST00000334060 TPRXLQ17RH7 258 aa9□□□□□ -0.97
SHOX-201ENST00000334060 COA5Q86WW8 74 aa9□□□□□ -0.97
SHOX-201ENST00000334060 A0A1B0GVX0 72 aa8.99□□□□□ -0.97
SHOX-201ENST00000334060 XP32Q5T750 250 aa8.99□□□□□ -0.97
SHOX-201ENST00000334060 C7orf65Q6ZTY9 151 aa8.99□□□□□ -0.97
SHOX-201ENST00000334060 LCA10Q71F78 164 aa8.97□□□□□ -0.97
SHOX-201ENST00000334060 SPTSSBQ8NFR3 76 aa8.97□□□□□ -0.97
SHOX-201ENST00000334060 MUC2Q02817 5179 aa8.96□□□□□ -0.98
SHOX-201ENST00000334060 KRTAP16-1A8MUX0 517 aa8.95□□□□□ -0.98
SHOX-201ENST00000334060 RNF213Q63HN8 5207 aa8.94□□□□□ -0.98
SHOX-201ENST00000334060 MMP24-AS1A0A0U1RRL7 71 aa8.92□□□□□ -0.98
SHOX-201ENST00000334060 C8orf17Q9NRJ1 99 aa8.92□□□□□ -0.98
SHOX-201ENST00000334060 LINC00313P59037 77 aa8.91□□□□□ -0.98
SHOX-201ENST00000334060 MUC17Q685J3 4493 aa8.85□□□□□ -0.99
SHOX-201ENST00000334060 A8MU10 97 aa8.85□□□□□ -0.99
SHOX-201ENST00000334060 KRTAP4-1Q9BYQ7 146 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms