RNA–Protein interactions for RNA: ENST00000333188.9

COPB2-201, Transcript of coatomer protein complex subunit beta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB2, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-201ENST00000333188 IGKV2-30P06310 120 aa5.25□□□□□ -1.57
COPB2-201ENST00000333188 C5orf47Q569G3 176 aa5.25□□□□□ -1.57
COPB2-201ENST00000333188 SSBP3-AS1Q7Z2R9 100 aa5.25□□□□□ -1.57
COPB2-201ENST00000333188 LINC00313P59037 77 aa5.25□□□□□ -1.57
COPB2-201ENST00000333188 TRAV22A0A0B4J277 110 aa5.25□□□□□ -1.57
COPB2-201ENST00000333188 A0A0U1RQV1 116 aa5.25□□□□□ -1.57
COPB2-201ENST00000333188 Q96NJ1 140 aa5.25□□□□□ -1.57
COPB2-201ENST00000333188 OXTP01178 125 aa5.24□□□□□ -1.57
COPB2-201ENST00000333188 Q6ZSA8 131 aa5.24□□□□□ -1.57
COPB2-201ENST00000333188 LINC00336Q6ZUF6 198 aa5.24□□□□□ -1.57
COPB2-201ENST00000333188 KRTAP3-3Q9BYR6 98 aa5.24□□□□□ -1.57
COPB2-201ENST00000333188 KRTAP3-2Q9BYR7 98 aa5.24□□□□□ -1.57
COPB2-201ENST00000333188 MRPL34Q9BQ48 92 aaKnown RBP5.24□□□□□ -1.57
COPB2-201ENST00000333188 C4orf26Q17RF5 130 aa5.23□□□□□ -1.57
COPB2-201ENST00000333188 LINC00304Q8N9R0 145 aa5.23□□□□□ -1.57
COPB2-201ENST00000333188 FAT2Q9NYQ8 4349 aa5.23□□□□□ -1.57
COPB2-201ENST00000333188 DYNC1H1Q14204 4646 aaKnown RBP5.22□□□□□ -1.57
COPB2-201ENST00000333188 C1orf195Q5TG92 126 aa5.22□□□□□ -1.57
COPB2-201ENST00000333188 FAM229AH3BQW9 127 aa5.21□□□□□ -1.57
COPB2-201ENST00000333188 KRTAP29-1A8MX34 341 aaPredicted RBP5.21□□□□□ -1.58
COPB2-201ENST00000333188 NDUFC1O43677 76 aa5.21□□□□□ -1.58
COPB2-201ENST00000333188 KRTAP1-4P0C5Y4 121 aa5.2□□□□□ -1.58
COPB2-201ENST00000333188 FAM229BQ4G0N7 80 aa5.19□□□□□ -1.58
COPB2-201ENST00000333188 PSPHP1O15172 72 aa5.19□□□□□ -1.58
COPB2-201ENST00000333188 Q5W150 140 aa5.18□□□□□ -1.58
COPB2-201ENST00000333188 LIMD2Q9BT23 127 aa5.18□□□□□ -1.58
COPB2-201ENST00000333188 SERP1Q9Y6X1 66 aa5.17□□□□□ -1.58
COPB2-201ENST00000333188 SPINK1P00995 79 aa5.17□□□□□ -1.58
COPB2-201ENST00000333188 Q8N9P0 234 aaPredicted RBP5.17□□□□□ -1.58
COPB2-201ENST00000333188 KIAA1109Q2LD37 5005 aa5.17□□□□□ -1.58
COPB2-201ENST00000333188 Q5VSD8 79 aa5.16□□□□□ -1.58
COPB2-201ENST00000333188 MYCBP2O75592 4640 aa5.15□□□□□ -1.58
COPB2-201ENST00000333188 ALMS1Q8TCU4 4167 aa5.14□□□□□ -1.59
COPB2-201ENST00000333188 LRP1Q07954 4544 aaKnown RBP5.14□□□□□ -1.59
COPB2-201ENST00000333188 CD164Q04900 197 aa5.13□□□□□ -1.59
COPB2-201ENST00000333188 APOBP04114 4563 aaKnown RBP5.13□□□□□ -1.59
COPB2-201ENST00000333188 TP53AIP1Q9HCN2 124 aa5.12□□□□□ -1.59
COPB2-201ENST00000333188 RYR3Q15413 4870 aa5.12□□□□□ -1.59
COPB2-201ENST00000333188 A0A1B0GVY2 172 aa5.12□□□□□ -1.59
COPB2-201ENST00000333188 CHKB-CPT1BH3BT56 60 aa5.12□□□□□ -1.59
COPB2-201ENST00000333188 PKD1P98161 4303 aa5.12□□□□□ -1.59
COPB2-201ENST00000333188 RYR2Q92736 4967 aa5.12□□□□□ -1.59
COPB2-201ENST00000333188 SPAG11AQ6PDA7 123 aa5.11□□□□□ -1.59
COPB2-201ENST00000333188 BRK1Q8WUW1 75 aa5.11□□□□□ -1.59
COPB2-201ENST00000333188 SMIM26A0A096LP01 95 aa5.1□□□□□ -1.59
COPB2-201ENST00000333188 Q8N1X5 172 aa5.1□□□□□ -1.59
COPB2-201ENST00000333188 RPS28P62857 69 aaKnown RBP5.08□□□□□ -1.6
COPB2-201ENST00000333188 FP248Q71RG6 208 aaPredicted RBP5.08□□□□□ -1.6
COPB2-201ENST00000333188 FAT3Q8TDW7 4589 aa5.08□□□□□ -1.6
COPB2-201ENST00000333188 ZCCHC13Q8WW36 166 aaKnown RBP5.08□□□□□ -1.6
COPB2-201ENST00000333188 C8orf87E5RJ46 101 aa5.07□□□□□ -1.6
COPB2-201ENST00000333188 ATP5EP56381 51 aaPredicted RBP5.07□□□□□ -1.6
COPB2-201ENST00000333188 COA5Q86WW8 74 aa5.07□□□□□ -1.6
COPB2-201ENST00000333188 A8MUN3 132 aa5.05□□□□□ -1.6
COPB2-201ENST00000333188 PRR15LQ9BU68 103 aa5.05□□□□□ -1.6
COPB2-201ENST00000333188 HRES1P13985 223 aa5.05□□□□□ -1.6
COPB2-201ENST00000333188 C7orf65Q6ZTY9 151 aa5.05□□□□□ -1.6
COPB2-201ENST00000333188 RYR1P21817 5038 aa5.04□□□□□ -1.6
COPB2-201ENST00000333188 Q5XG85 94 aa5.04□□□□□ -1.6
COPB2-201ENST00000333188 CYP4F30PQ9H0H9 118 aa5.04□□□□□ -1.6
COPB2-201ENST00000333188 LOC101927531A0A1B0GV80 90 aa5.03□□□□□ -1.6
COPB2-201ENST00000333188 H3BPC8 53 aa5.02□□□□□ -1.61
COPB2-201ENST00000333188 EPPK1P58107 5090 aaKnown RBP5.01□□□□□ -1.61
COPB2-201ENST00000333188 SPTSSBQ8NFR3 76 aa4.99□□□□□ -1.61
COPB2-201ENST00000333188 IGLV7-46A0A075B6I9 117 aa4.99□□□□□ -1.61
COPB2-201ENST00000333188 A6NED7 52 aa4.97□□□□□ -1.61
COPB2-201ENST00000333188 KRTAP17-1Q9BYP8 105 aa4.97□□□□□ -1.61
COPB2-201ENST00000333188 ASB16-AS1Q495Z4 193 aa4.97□□□□□ -1.61
COPB2-201ENST00000333188 ACYP2P14621 99 aa4.96□□□□□ -1.62
COPB2-201ENST00000333188 KRTAP10-4P60372 401 aaPredicted RBP4.96□□□□□ -1.62
COPB2-201ENST00000333188 ATP11AUNQ6ZP68 121 aa4.95□□□□□ -1.62
COPB2-201ENST00000333188 KRTAP4-5Q9BYR2 181 aa4.95□□□□□ -1.62
COPB2-201ENST00000333188 J3QL48 77 aa4.95□□□□□ -1.62
COPB2-201ENST00000333188 KRTAP16-1A8MUX0 517 aa4.94□□□□□ -1.62
COPB2-201ENST00000333188 SPANXA2-OT1Q8N9U9 137 aa4.94□□□□□ -1.62
COPB2-201ENST00000333188 SPINK7P58062 85 aa4.94□□□□□ -1.62
COPB2-201ENST00000333188 A8MU10 97 aa4.93□□□□□ -1.62
COPB2-201ENST00000333188 HSPG2P98160 4391 aa4.91□□□□□ -1.62
COPB2-201ENST00000333188 KRTAP13-3Q3SY46 172 aa4.87□□□□□ -1.63
COPB2-201ENST00000333188 A0A1B0GU69 56 aa4.86□□□□□ -1.63
COPB2-201ENST00000333188 V9GYY9 64 aa4.85□□□□□ -1.63
COPB2-201ENST00000333188 KRTAP10-8P60410 259 aa4.84□□□□□ -1.63
COPB2-201ENST00000333188 Q5VV11 94 aa4.84□□□□□ -1.64
COPB2-201ENST00000333188 Q1T7F1 81 aa4.83□□□□□ -1.64
COPB2-201ENST00000333188 DMAC1Q96GE9 116 aa4.82□□□□□ -1.64
COPB2-201ENST00000333188 LRP2P98164 4655 aa4.82□□□□□ -1.64
COPB2-201ENST00000333188 SEC61GP60059 68 aa4.82□□□□□ -1.64
COPB2-201ENST00000333188 PKHD1L1Q86WI1 4243 aa4.81□□□□□ -1.64
COPB2-201ENST00000333188 RPS29P62273 56 aaKnown RBP4.81□□□□□ -1.64
COPB2-201ENST00000333188 ABCA13Q86UQ4 5058 aa4.8□□□□□ -1.64
COPB2-201ENST00000333188 A8MUU9 505 aa4.79□□□□□ -1.64
COPB2-201ENST00000333188 XP32Q5T750 250 aa4.79□□□□□ -1.64
COPB2-201ENST00000333188 LPAP08519 4548 aa4.79□□□□□ -1.64
COPB2-201ENST00000333188 PMAIP1Q13794 54 aa4.79□□□□□ -1.64
COPB2-201ENST00000333188 C20orf166-AS1Q96NR2 134 aa4.79□□□□□ -1.64
COPB2-201ENST00000333188 PRO0628Q9UI54 55 aa4.79□□□□□ -1.64
COPB2-201ENST00000333188 HERC2O95714 4834 aa4.78□□□□□ -1.64
COPB2-201ENST00000333188 MT1HL1P0DM35 61 aa4.78□□□□□ -1.64
COPB2-201ENST00000333188 Q75L30 129 aa4.74□□□□□ -1.65
COPB2-201ENST00000333188 LINC01558Q9Y6Z2 57 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms