RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 NOTCH2NLQ7Z3S9 236 aa8.64□□□□□ -1.03
LRRC28-202ENST00000331450 IGHV6-1A0A0B4J1U7 121 aa8.63□□□□□ -1.03
LRRC28-202ENST00000331450 KRTAP16-1A8MUX0 517 aa8.63□□□□□ -1.03
LRRC28-202ENST00000331450 SEC61BP60468 96 aaKnown RBP8.63□□□□□ -1.03
LRRC28-202ENST00000331450 IGKV3D-7A0A0C4DH55 119 aa8.62□□□□□ -1.03
LRRC28-202ENST00000331450 C8orf87E5RJ46 101 aa8.62□□□□□ -1.03
LRRC28-202ENST00000331450 LINC00313P59037 77 aa8.62□□□□□ -1.03
LRRC28-202ENST00000331450 C20orf166-AS1Q96NR2 134 aa8.61□□□□□ -1.03
LRRC28-202ENST00000331450 MUC17Q685J3 4493 aa8.6□□□□□ -1.03
LRRC28-202ENST00000331450 NDUFB1O75438 58 aa8.6□□□□□ -1.03
LRRC28-202ENST00000331450 Q75L30 129 aa8.6□□□□□ -1.03
LRRC28-202ENST00000331450 UBL5Q9BZL1 73 aa8.6□□□□□ -1.03
LRRC28-202ENST00000331450 A8MUU9 505 aa8.59□□□□□ -1.03
LRRC28-202ENST00000331450 BPY2O14599 106 aa8.59□□□□□ -1.03
LRRC28-202ENST00000331450 PRR15Q8IV56 129 aa8.58□□□□□ -1.04
LRRC28-202ENST00000331450 FAM240AA0A1B0GVK7 77 aa8.57□□□□□ -1.04
LRRC28-202ENST00000331450 K7EQZ3 153 aa8.57□□□□□ -1.04
LRRC28-202ENST00000331450 PCOTHQ58A44 107 aa8.56□□□□□ -1.04
LRRC28-202ENST00000331450 C8orf17Q9NRJ1 99 aa8.56□□□□□ -1.04
LRRC28-202ENST00000331450 ACYP1P07311 99 aa8.55□□□□□ -1.04
LRRC28-202ENST00000331450 KRTAP4-1Q9BYQ7 146 aa8.54□□□□□ -1.04
LRRC28-202ENST00000331450 MMP24-AS1A0A0U1RRL7 71 aa8.52□□□□□ -1.05
LRRC28-202ENST00000331450 RNF213Q63HN8 5207 aa8.5□□□□□ -1.05
LRRC28-202ENST00000331450 Q8N9L7 120 aa8.5□□□□□ -1.05
LRRC28-202ENST00000331450 CXCL6P80162 114 aa8.48□□□□□ -1.05
LRRC28-202ENST00000331450 ATP11AUNQ6ZP68 121 aa8.48□□□□□ -1.05
LRRC28-202ENST00000331450 Q8N9P0 234 aaPredicted RBP8.48□□□□□ -1.05
LRRC28-202ENST00000331450 TMEM254Q8TBM7 123 aa8.46□□□□□ -1.06
LRRC28-202ENST00000331450 hDV103S1A0JD37 113 aa8.43□□□□□ -1.06
LRRC28-202ENST00000331450 MRPL34Q9BQ48 92 aaKnown RBP8.43□□□□□ -1.06
LRRC28-202ENST00000331450 J3QR89 54 aa8.41□□□□□ -1.06
LRRC28-202ENST00000331450 ATP5EP2Q5VTU8 51 aa8.41□□□□□ -1.06
LRRC28-202ENST00000331450 MUC2Q02817 5179 aa8.39□□□□□ -1.07
LRRC28-202ENST00000331450 CASC2Q6XLA1 102 aa8.39□□□□□ -1.07
LRRC28-202ENST00000331450 WFDC13Q8IUB5 93 aa8.39□□□□□ -1.07
LRRC28-202ENST00000331450 HCG22E2RYF7 251 aa8.37□□□□□ -1.07
LRRC28-202ENST00000331450 LINC00643Q86TS7 51 aa8.37□□□□□ -1.07
LRRC28-202ENST00000331450 ZCCHC13Q8WW36 166 aaKnown RBP8.37□□□□□ -1.07
LRRC28-202ENST00000331450 A0A0U1RQV1 116 aa8.32□□□□□ -1.08
LRRC28-202ENST00000331450 KRTAP19-2Q3LHN2 52 aa8.31□□□□□ -1.08
LRRC28-202ENST00000331450 NDUFS5O43920 106 aa8.3□□□□□ -1.08
LRRC28-202ENST00000331450 K7ERU9 68 aa8.29□□□□□ -1.08
LRRC28-202ENST00000331450 HIST1H4AP62805 103 aaKnown RBP8.26□□□□□ -1.09
LRRC28-202ENST00000331450 LCE2CQ5TA81 110 aa8.25□□□□□ -1.09
LRRC28-202ENST00000331450 Q5W150 140 aa8.24□□□□□ -1.09
LRRC28-202ENST00000331450 A0A087WVE0 104 aa8.22□□□□□ -1.09
LRRC28-202ENST00000331450 HRES1P13985 223 aa8.21□□□□□ -1.1
LRRC28-202ENST00000331450 SPINK7P58062 85 aa8.21□□□□□ -1.1
LRRC28-202ENST00000331450 FAT4Q6V0I7 4981 aa8.2□□□□□ -1.1
LRRC28-202ENST00000331450 LCE2AQ5TA79 106 aaPredicted RBP8.19□□□□□ -1.1
LRRC28-202ENST00000331450 MPLKIPQ8TAP9 179 aa8.19□□□□□ -1.1
LRRC28-202ENST00000331450 TP53AIP1Q9HCN2 124 aa8.19□□□□□ -1.1
LRRC28-202ENST00000331450 MT-ATP8P03928 68 aa8.12□□□□□ -1.11
LRRC28-202ENST00000331450 COX6B2Q6YFQ2 88 aa8.12□□□□□ -1.11
LRRC28-202ENST00000331450 C7orf65Q6ZTY9 151 aa8.12□□□□□ -1.11
LRRC28-202ENST00000331450 IMUPQ9GZP8 106 aa8.12□□□□□ -1.11
LRRC28-202ENST00000331450 IGKV2D-30A0A075B6S6 120 aa8.1□□□□□ -1.11
LRRC28-202ENST00000331450 IGKV2-30P06310 120 aa8.1□□□□□ -1.11
LRRC28-202ENST00000331450 MT1HP80294 61 aa8.1□□□□□ -1.11
LRRC28-202ENST00000331450 RBM12B-AS1Q9P1G2 102 aa8.09□□□□□ -1.11
LRRC28-202ENST00000331450 TRAV22A0A0B4J277 110 aa8.07□□□□□ -1.12
LRRC28-202ENST00000331450 UQCRQO14949 82 aa8.07□□□□□ -1.12
LRRC28-202ENST00000331450 OCR1Q9BZK8 76 aa8.06□□□□□ -1.12
LRRC28-202ENST00000331450 FAM236DA0A1B0GTK5 79 aa8.02□□□□□ -1.13
LRRC28-202ENST00000331450 FAM236CP0DP71 79 aa8.02□□□□□ -1.13
LRRC28-202ENST00000331450 H0Y9P7 68 aa7.99□□□□□ -1.13
LRRC28-202ENST00000331450 LOC101927531A0A1B0GV80 90 aa7.97□□□□□ -1.13
LRRC28-202ENST00000331450 ATOX1O00244 68 aa7.97□□□□□ -1.13
LRRC28-202ENST00000331450 CYP4F30PQ9H0H9 118 aa7.97□□□□□ -1.13
LRRC28-202ENST00000331450 FLGP20930 4061 aaPredicted RBP7.97□□□□□ -1.13
LRRC28-202ENST00000331450 FAM236AA0A1B0GUQ0 79 aa7.96□□□□□ -1.14
LRRC28-202ENST00000331450 FAM236BA0A1B0GV22 79 aa7.96□□□□□ -1.14
LRRC28-202ENST00000331450 SCGB1A1P11684 91 aa7.95□□□□□ -1.14
LRRC28-202ENST00000331450 C4orf26Q17RF5 130 aa7.94□□□□□ -1.14
LRRC28-202ENST00000331450 C5orf47Q569G3 176 aa7.91□□□□□ -1.14
LRRC28-202ENST00000331450 KRTAP9-2Q9BYQ4 174 aa7.91□□□□□ -1.14
LRRC28-202ENST00000331450 M0R2T5 61 aa7.9□□□□□ -1.14
LRRC28-202ENST00000331450 MP68P56378 58 aa7.89□□□□□ -1.15
LRRC28-202ENST00000331450 C1orf64Q8NEQ6 169 aa7.89□□□□□ -1.15
LRRC28-202ENST00000331450 LINC00208Q96KT6 92 aa7.89□□□□□ -1.15
LRRC28-202ENST00000331450 KRTAP10-6P60371 365 aaPredicted RBP7.88□□□□□ -1.15
LRRC28-202ENST00000331450 H1FX-AS1Q4G0G2 97 aa7.88□□□□□ -1.15
LRRC28-202ENST00000331450 KRTAP9-6A0A140TA67 174 aa7.87□□□□□ -1.15
LRRC28-202ENST00000331450 LORP23490 312 aaPredicted RBP7.87□□□□□ -1.15
LRRC28-202ENST00000331450 SMIM20Q8N5G0 67 aa7.87□□□□□ -1.15
LRRC28-202ENST00000331450 H3BPC8 53 aa7.86□□□□□ -1.15
LRRC28-202ENST00000331450 KRTAP3-1Q9BYR8 98 aa7.86□□□□□ -1.15
LRRC28-202ENST00000331450 TRAV7A0A075B6U4 112 aa7.85□□□□□ -1.15
LRRC28-202ENST00000331450 KLKP1Q107X0 134 aa7.82□□□□□ -1.16
LRRC28-202ENST00000331450 SERP2Q8N6R1 65 aa7.74□□□□□ -1.17
LRRC28-202ENST00000331450 KRTAP9-8Q9BYQ0 159 aa7.74□□□□□ -1.17
LRRC28-202ENST00000331450 S4R3F8 94 aa7.69□□□□□ -1.18
LRRC28-202ENST00000331450 A8MUN3 132 aa7.68□□□□□ -1.18
LRRC28-202ENST00000331450 LCA10Q71F78 164 aa7.67□□□□□ -1.18
LRRC28-202ENST00000331450 MT2AP02795 61 aa7.66□□□□□ -1.18
LRRC28-202ENST00000331450 SNURFQ9Y675 71 aa7.64□□□□□ -1.19
LRRC28-202ENST00000331450 C20orf197Q8N268 126 aa7.63□□□□□ -1.19
LRRC28-202ENST00000331450 KRTAP3-3Q9BYR6 98 aa7.63□□□□□ -1.19
LRRC28-202ENST00000331450 DMAC1Q96GE9 116 aa7.62□□□□□ -1.19
LRRC28-202ENST00000331450 COX7CP15954 63 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 148.2 ms