RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 IGHV6-1A0A0B4J1U7 121 aa6.81□□□□□ -1.32
GTF3C6-201ENST00000329970 HRES1P13985 223 aa6.81□□□□□ -1.32
GTF3C6-201ENST00000329970 DSCR8Q96T75 97 aa6.81□□□□□ -1.32
GTF3C6-201ENST00000329970 RBM12B-AS1Q9P1G2 102 aa6.81□□□□□ -1.32
GTF3C6-201ENST00000329970 A0A1B0GVX0 72 aa6.8□□□□□ -1.32
GTF3C6-201ENST00000329970 J3KT08 172 aa6.79□□□□□ -1.32
GTF3C6-201ENST00000329970 SCGB1C2P0DMR2 95 aa6.79□□□□□ -1.32
GTF3C6-201ENST00000329970 FAM236DA0A1B0GTK5 79 aa6.78□□□□□ -1.32
GTF3C6-201ENST00000329970 FAM236CP0DP71 79 aa6.78□□□□□ -1.32
GTF3C6-201ENST00000329970 KRTAP4-8A0A0G2JLE6 195 aa6.77□□□□□ -1.33
GTF3C6-201ENST00000329970 VPS25Q9BRG1 176 aa6.77□□□□□ -1.33
GTF3C6-201ENST00000329970 C9JAW5 83 aa6.76□□□□□ -1.33
GTF3C6-201ENST00000329970 KRTAP4-12Q9BQ66 201 aa6.76□□□□□ -1.33
GTF3C6-201ENST00000329970 A0A1B0GW54 56 aa6.75□□□□□ -1.33
GTF3C6-201ENST00000329970 BAALC-AS2P0C853 105 aa6.75□□□□□ -1.33
GTF3C6-201ENST00000329970 Q6ZQT0 140 aa6.75□□□□□ -1.33
GTF3C6-201ENST00000329970 KRTAP9-9Q9BYP9 154 aa6.75□□□□□ -1.33
GTF3C6-201ENST00000329970 KRTAP9-4Q9BYQ2 154 aa6.75□□□□□ -1.33
GTF3C6-201ENST00000329970 MT2AP02795 61 aa6.74□□□□□ -1.33
GTF3C6-201ENST00000329970 USH2AO75445 5202 aa6.73□□□□□ -1.33
GTF3C6-201ENST00000329970 ZCCHC13Q8WW36 166 aaKnown RBP6.73□□□□□ -1.33
GTF3C6-201ENST00000329970 JMJD7-PLA2G4BH0Y9G9 81 aa6.72□□□□□ -1.33
GTF3C6-201ENST00000329970 MTURNQ8N3F0 131 aa6.72□□□□□ -1.33
GTF3C6-201ENST00000329970 Q8N9P0 234 aaPredicted RBP6.72□□□□□ -1.33
GTF3C6-201ENST00000329970 SSPOA2VEC9 5147 aa6.71□□□□□ -1.33
GTF3C6-201ENST00000329970 LOC110117498A0A087WWA1 95 aa6.7□□□□□ -1.34
GTF3C6-201ENST00000329970 NDUFB1O75438 58 aa6.7□□□□□ -1.34
GTF3C6-201ENST00000329970 ATXN8Q156A1 80 aa6.7□□□□□ -1.34
GTF3C6-201ENST00000329970 TMA7Q9Y2S6 64 aaKnown RBP6.7□□□□□ -1.34
GTF3C6-201ENST00000329970 M0R143 59 aa6.69□□□□□ -1.34
GTF3C6-201ENST00000329970 PDE6GP18545 87 aa6.69□□□□□ -1.34
GTF3C6-201ENST00000329970 MT1FP04733 61 aa6.68□□□□□ -1.34
GTF3C6-201ENST00000329970 A8MWP4 228 aa6.67□□□□□ -1.34
GTF3C6-201ENST00000329970 SPINK7P58062 85 aa6.67□□□□□ -1.34
GTF3C6-201ENST00000329970 KRTAP9-3Q9BYQ3 159 aa6.66□□□□□ -1.34
GTF3C6-201ENST00000329970 C8orf17Q9NRJ1 99 aa6.66□□□□□ -1.34
GTF3C6-201ENST00000329970 IGKV3D-7A0A0C4DH55 119 aa6.63□□□□□ -1.35
GTF3C6-201ENST00000329970 KRTAP10-10P60014 251 aa6.63□□□□□ -1.35
GTF3C6-201ENST00000329970 LYRM7Q5U5X0 104 aa6.62□□□□□ -1.35
GTF3C6-201ENST00000329970 NAA38Q9BRA0 125 aaKnown RBP6.61□□□□□ -1.35
GTF3C6-201ENST00000329970 Q6ZVQ6 151 aa6.6□□□□□ -1.35
GTF3C6-201ENST00000329970 PRR15Q8IV56 129 aa6.6□□□□□ -1.35
GTF3C6-201ENST00000329970 C14orf132Q9NPU4 83 aa6.6□□□□□ -1.35
GTF3C6-201ENST00000329970 KRTAP9-7A8MTY7 169 aa6.58□□□□□ -1.36
GTF3C6-201ENST00000329970 SMIM6P0DI80 62 aa6.58□□□□□ -1.36
GTF3C6-201ENST00000329970 NREPQ16612 68 aa6.57□□□□□ -1.36
GTF3C6-201ENST00000329970 WFDC13Q8IUB5 93 aa6.57□□□□□ -1.36
GTF3C6-201ENST00000329970 TMEM254Q8TBM7 123 aa6.57□□□□□ -1.36
GTF3C6-201ENST00000329970 FCGBPQ9Y6R7 5405 aaPredicted RBP6.56□□□□□ -1.36
GTF3C6-201ENST00000329970 KRTAP4-7Q9BYR0 210 aa6.56□□□□□ -1.36
GTF3C6-201ENST00000329970 MMP24-AS1A0A0U1RRL7 71 aa6.55□□□□□ -1.36
GTF3C6-201ENST00000329970 KRTAP19-1Q8IUB9 90 aa6.55□□□□□ -1.36
GTF3C6-201ENST00000329970 MRPL34Q9BQ48 92 aaKnown RBP6.55□□□□□ -1.36
GTF3C6-201ENST00000329970 H3BT86 120 aa6.52□□□□□ -1.37
GTF3C6-201ENST00000329970 hDV103S1A0JD37 113 aa6.51□□□□□ -1.37
GTF3C6-201ENST00000329970 TSTD3H0UI37 97 aa6.5□□□□□ -1.37
GTF3C6-201ENST00000329970 K7EQZ3 153 aa6.49□□□□□ -1.37
GTF3C6-201ENST00000329970 C9orf118A6NHY6 69 aa6.47□□□□□ -1.37
GTF3C6-201ENST00000329970 MACF1Q9UPN3 7388 aaKnown RBP6.47□□□□□ -1.37
GTF3C6-201ENST00000329970 KRTAP19-6Q3LI70 58 aa6.46□□□□□ -1.38
GTF3C6-201ENST00000329970 H1FX-AS1Q4G0G2 97 aa6.46□□□□□ -1.38
GTF3C6-201ENST00000329970 LINC00846Q9NV44 126 aa6.46□□□□□ -1.38
GTF3C6-201ENST00000329970 BATFQ16520 125 aa6.45□□□□□ -1.38
GTF3C6-201ENST00000329970 A0A1W2PPM0 123 aa6.44□□□□□ -1.38
GTF3C6-201ENST00000329970 BPY2O14599 106 aa6.44□□□□□ -1.38
GTF3C6-201ENST00000329970 TAX1BP3O14907 124 aa6.44□□□□□ -1.38
GTF3C6-201ENST00000329970 NDUFS5O43920 106 aa6.43□□□□□ -1.38
GTF3C6-201ENST00000329970 C7orf65Q6ZTY9 151 aa6.43□□□□□ -1.38
GTF3C6-201ENST00000329970 LCE1DQ5T752 114 aa6.42□□□□□ -1.38
GTF3C6-201ENST00000329970 Q5W150 140 aa6.4□□□□□ -1.38
GTF3C6-201ENST00000329970 SYNE2Q8WXH0 6885 aaKnown RBP6.39□□□□□ -1.39
GTF3C6-201ENST00000329970 IGKV2D-30A0A075B6S6 120 aa6.38□□□□□ -1.39
GTF3C6-201ENST00000329970 IGKV2-30P06310 120 aa6.38□□□□□ -1.39
GTF3C6-201ENST00000329970 CASC2Q6XLA1 102 aa6.37□□□□□ -1.39
GTF3C6-201ENST00000329970 HCG22E2RYF7 251 aa6.35□□□□□ -1.39
GTF3C6-201ENST00000329970 CXCL6P80162 114 aa6.35□□□□□ -1.39
GTF3C6-201ENST00000329970 Q8N9L7 120 aa6.34□□□□□ -1.39
GTF3C6-201ENST00000329970 SPCS1Q9Y6A9 102 aa6.33□□□□□ -1.4
GTF3C6-201ENST00000329970 LOC105371267A0A1B0GV96 52 aa6.32□□□□□ -1.4
GTF3C6-201ENST00000329970 KRTAP4-9Q9BYQ8 210 aa6.31□□□□□ -1.4
GTF3C6-201ENST00000329970 C4orf26Q17RF5 130 aa6.29□□□□□ -1.4
GTF3C6-201ENST00000329970 UBL5Q9BZL1 73 aa6.29□□□□□ -1.4
GTF3C6-201ENST00000329970 KRTAP4-2Q9BYR5 136 aa6.28□□□□□ -1.4
GTF3C6-201ENST00000329970 PRO0461Q9UI25 63 aa6.27□□□□□ -1.41
GTF3C6-201ENST00000329970 COL5A1-AS1Q5SY13 56 aa6.23□□□□□ -1.41
GTF3C6-201ENST00000329970 KRTAP3-1Q9BYR8 98 aa6.23□□□□□ -1.41
GTF3C6-201ENST00000329970 K7EP34 96 aa6.22□□□□□ -1.41
GTF3C6-201ENST00000329970 TP53AIP1Q9HCN2 124 aa6.21□□□□□ -1.42
GTF3C6-201ENST00000329970 KRTAP6-3Q3LI67 103 aa6.2□□□□□ -1.42
GTF3C6-201ENST00000329970 S4R3F8 94 aa6.2□□□□□ -1.42
GTF3C6-201ENST00000329970 C5orf47Q569G3 176 aa6.19□□□□□ -1.42
GTF3C6-201ENST00000329970 C1orf64Q8NEQ6 169 aa6.18□□□□□ -1.42
GTF3C6-201ENST00000329970 CSAG1Q6PB30 78 aa6.17□□□□□ -1.42
GTF3C6-201ENST00000329970 FAM236AA0A1B0GUQ0 79 aa6.15□□□□□ -1.42
GTF3C6-201ENST00000329970 FAM236BA0A1B0GV22 79 aa6.15□□□□□ -1.42
GTF3C6-201ENST00000329970 LCA10Q71F78 164 aa6.15□□□□□ -1.42
GTF3C6-201ENST00000329970 SPRR2GQ9BYE4 73 aa6.15□□□□□ -1.42
GTF3C6-201ENST00000329970 KRTAP19-8Q3LI54 63 aa6.13□□□□□ -1.43
GTF3C6-201ENST00000329970 GTF2H5Q6ZYL4 71 aa6.13□□□□□ -1.43
GTF3C6-201ENST00000329970 F8W1H4 67 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms