RNA–Protein interactions for RNA: ENST00000327702.11

CACNA1C-201, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-201ENST00000327702 LOC400499M0QZD8 3231 aa5.96□□□□□ -1.46
CACNA1C-201ENST00000327702 DMXL1Q9Y485 3027 aa5.95□□□□□ -1.46
CACNA1C-201ENST00000327702 DMXL2Q8TDJ6 3036 aa5.95□□□□□ -1.46
CACNA1C-201ENST00000327702 ADGRG4Q8IZF6 3080 aa5.93□□□□□ -1.46
CACNA1C-201ENST00000327702 MGAM2Q2M2H8 2515 aa5.93□□□□□ -1.46
CACNA1C-201ENST00000327702 LAMA5O15230 3695 aa5.93□□□□□ -1.46
CACNA1C-201ENST00000327702 ATMQ13315 3056 aa5.91□□□□□ -1.46
CACNA1C-201ENST00000327702 CSMD1Q96PZ7 3565 aa5.9□□□□□ -1.46
CACNA1C-201ENST00000327702 ATRQ13535 2644 aa5.9□□□□□ -1.46
CACNA1C-201ENST00000327702 TEP1Q99973 2627 aaKnown RBP5.89□□□□□ -1.47
CACNA1C-201ENST00000327702 FLNCQ14315 2725 aa5.89□□□□□ -1.47
CACNA1C-201ENST00000327702 RELNP78509 3460 aa5.88□□□□□ -1.47
CACNA1C-201ENST00000327702 KRTAP13-1Q8IUC0 172 aa5.87□□□□□ -1.47
CACNA1C-201ENST00000327702 PRO2289Q9P1D8 64 aa5.87□□□□□ -1.47
CACNA1C-201ENST00000327702 KRTAP10-10P60014 251 aa5.85□□□□□ -1.47
CACNA1C-201ENST00000327702 KRTAP7-1Q8IUC3 87 aa5.85□□□□□ -1.47
CACNA1C-201ENST00000327702 MAST4O15021 2626 aa5.85□□□□□ -1.47
CACNA1C-201ENST00000327702 COL12A1Q99715 3063 aa5.84□□□□□ -1.47
CACNA1C-201ENST00000327702 GCN1Q92616 2671 aaKnown RBP5.83□□□□□ -1.48
CACNA1C-201ENST00000327702 SMG1Q96Q15 3661 aaKnown RBP5.81□□□□□ -1.48
CACNA1C-201ENST00000327702 NBEAL2Q6ZNJ1 2754 aa5.81□□□□□ -1.48
CACNA1C-201ENST00000327702 TACC2O95359 2948 aa5.79□□□□□ -1.48
CACNA1C-201ENST00000327702 TEX15Q9BXT5 2789 aa5.77□□□□□ -1.49
CACNA1C-201ENST00000327702 ITPR1Q14643 2758 aa5.77□□□□□ -1.49
CACNA1C-201ENST00000327702 ZZEF1O43149 2961 aa5.77□□□□□ -1.49
CACNA1C-201ENST00000327702 MUC3AQ02505 3323 aa5.75□□□□□ -1.49
CACNA1C-201ENST00000327702 H0YAA0 97 aa5.75□□□□□ -1.49
CACNA1C-201ENST00000327702 CRYBG3Q68DQ2 2970 aa5.74□□□□□ -1.49
CACNA1C-201ENST00000327702 SVEP1Q4LDE5 3571 aa5.74□□□□□ -1.49
CACNA1C-201ENST00000327702 UBR5O95071 2799 aaPredicted RBP5.74□□□□□ -1.49
CACNA1C-201ENST00000327702 XP32Q5T750 250 aa5.74□□□□□ -1.49
CACNA1C-201ENST00000327702 COL6A5A8TX70 2615 aa5.73□□□□□ -1.49
CACNA1C-201ENST00000327702 ASH1LQ9NR48 2969 aaKnown RBP5.73□□□□□ -1.49
CACNA1C-201ENST00000327702 STAB1Q9NY15 2570 aa5.72□□□□□ -1.49
CACNA1C-201ENST00000327702 DMBT1Q9UGM3 2413 aaPredicted RBP5.72□□□□□ -1.49
CACNA1C-201ENST00000327702 CRCT1Q9UGL9 99 aa5.72□□□□□ -1.49
CACNA1C-201ENST00000327702 SETXQ7Z333 2677 aaKnown RBP5.7□□□□□ -1.5
CACNA1C-201ENST00000327702 ITPR2Q14571 2701 aa5.7□□□□□ -1.5
CACNA1C-201ENST00000327702 UTP20O75691 2785 aaKnown RBP5.69□□□□□ -1.5
CACNA1C-201ENST00000327702 APCP25054 2843 aa5.68□□□□□ -1.5
CACNA1C-201ENST00000327702 HIVEP1P15822 2718 aa5.67□□□□□ -1.5
CACNA1C-201ENST00000327702 KMT2BQ9UMN6 2715 aaPredicted RBP5.66□□□□□ -1.5
CACNA1C-201ENST00000327702 NBPF19A0A087WUL8 3843 aa5.63□□□□□ -1.51
CACNA1C-201ENST00000327702 SPENQ96T58 3664 aaKnown RBP5.63□□□□□ -1.51
CACNA1C-201ENST00000327702 TPRXLQ17RH7 258 aa5.62□□□□□ -1.51
CACNA1C-201ENST00000327702 CUBNO60494 3623 aa5.6□□□□□ -1.51
CACNA1C-201ENST00000327702 KRTAP21-3Q3LHN1 58 aa5.59□□□□□ -1.51
CACNA1C-201ENST00000327702 NOTCH1P46531 2555 aa5.56□□□□□ -1.52
CACNA1C-201ENST00000327702 HRNRQ86YZ3 2850 aaPredicted RBP5.56□□□□□ -1.52
CACNA1C-201ENST00000327702 KRTAP1-4P0C5Y4 121 aa5.55□□□□□ -1.52
CACNA1C-201ENST00000327702 NSD1Q96L73 2696 aaPredicted RBP5.55□□□□□ -1.52
CACNA1C-201ENST00000327702 CELSR2Q9HCU4 2923 aa5.53□□□□□ -1.52
CACNA1C-201ENST00000327702 TENM4Q6N022 2769 aa5.52□□□□□ -1.53
CACNA1C-201ENST00000327702 NBEAL1Q6ZS30 2694 aa5.52□□□□□ -1.53
CACNA1C-201ENST00000327702 KRTAP12-2P59991 146 aa5.49□□□□□ -1.53
CACNA1C-201ENST00000327702 ZANQ9Y493 2812 aa5.49□□□□□ -1.53
CACNA1C-201ENST00000327702 FBN2P35556 2912 aa5.47□□□□□ -1.53
CACNA1C-201ENST00000327702 KRTAP13-3Q3SY46 172 aa5.46□□□□□ -1.54
CACNA1C-201ENST00000327702 KRTAP13-4Q3LI77 160 aa5.43□□□□□ -1.54
CACNA1C-201ENST00000327702 CSMD2Q7Z408 3487 aa5.42□□□□□ -1.54
CACNA1C-201ENST00000327702 DCHS2Q6V1P9 2916 aa5.41□□□□□ -1.54
CACNA1C-201ENST00000327702 PDZD2O15018 2839 aa5.4□□□□□ -1.54
CACNA1C-201ENST00000327702 NIPBLQ6KC79 2804 aaeCLIP5.39□□□□□ -1.55
CACNA1C-201ENST00000327702 KRTAP15-1Q3LI76 137 aa5.38□□□□□ -1.55
CACNA1C-201ENST00000327702 STAB2Q8WWQ8 2551 aa5.38□□□□□ -1.55
CACNA1C-201ENST00000327702 CELSR1Q9NYQ6 3014 aa5.37□□□□□ -1.55
CACNA1C-201ENST00000327702 BSNQ9UPA5 3926 aa5.37□□□□□ -1.55
CACNA1C-201ENST00000327702 ZFHX3Q15911 3703 aa5.37□□□□□ -1.55
CACNA1C-201ENST00000327702 OTOGQ6ZRI0 2925 aa5.32□□□□□ -1.56
CACNA1C-201ENST00000327702 VPS13CQ709C8 3753 aa5.3□□□□□ -1.56
CACNA1C-201ENST00000327702 NF1P21359 2839 aa5.28□□□□□ -1.56
CACNA1C-201ENST00000327702 MXRA5Q9NR99 2828 aa5.27□□□□□ -1.57
CACNA1C-201ENST00000327702 KRTAP12-1P59990 96 aa5.27□□□□□ -1.57
CACNA1C-201ENST00000327702 INE1O15225 51 aa5.23□□□□□ -1.57
CACNA1C-201ENST00000327702 ANK3Q12955 4377 aaKnown RBP5.18□□□□□ -1.58
CACNA1C-201ENST00000327702 TENM1Q9UKZ4 2725 aa5.13□□□□□ -1.59
CACNA1C-201ENST00000327702 KRTAP10-6P60371 365 aaPredicted RBP5.12□□□□□ -1.59
CACNA1C-201ENST00000327702 FBN1P35555 2871 aaKnown RBP5.11□□□□□ -1.59
CACNA1C-201ENST00000327702 TRRAPQ9Y4A5 3859 aa5.1□□□□□ -1.59
CACNA1C-201ENST00000327702 LORP23490 312 aaPredicted RBP5.07□□□□□ -1.6
CACNA1C-201ENST00000327702 TENM2Q9NT68 2774 aa5.05□□□□□ -1.6
CACNA1C-201ENST00000327702 CSMD3Q7Z407 3707 aa5.04□□□□□ -1.6
CACNA1C-201ENST00000327702 KRTAP3-1Q9BYR8 98 aa5□□□□□ -1.61
CACNA1C-201ENST00000327702 TENM3Q9P273 2699 aa5□□□□□ -1.61
CACNA1C-201ENST00000327702 VWFP04275 2813 aa4.98□□□□□ -1.61
CACNA1C-201ENST00000327702 KRTAP10-12P60413 245 aa4.97□□□□□ -1.61
CACNA1C-201ENST00000327702 AKAP9Q99996 3911 aa4.96□□□□□ -1.62
CACNA1C-201ENST00000327702 PKD1L1Q8TDX9 2849 aa4.95□□□□□ -1.62
CACNA1C-201ENST00000327702 ZNF469Q96JG9 3925 aaPredicted RBP4.95□□□□□ -1.62
CACNA1C-201ENST00000327702 KRTAP10-7P60409 375 aaPredicted RBP4.9□□□□□ -1.62
CACNA1C-201ENST00000327702 KRTAP10-5P60370 271 aa4.9□□□□□ -1.63
CACNA1C-201ENST00000327702 TGP01266 2768 aa4.87□□□□□ -1.63
CACNA1C-201ENST00000327702 HUWE1Q7Z6Z7 4374 aaKnown RBP4.87□□□□□ -1.63
CACNA1C-201ENST00000327702 FBN3Q75N90 2809 aa4.82□□□□□ -1.64
CACNA1C-201ENST00000327702 KRTAP12-3P60328 96 aa4.81□□□□□ -1.64
CACNA1C-201ENST00000327702 LCE3AQ5TA76 89 aa4.74□□□□□ -1.65
CACNA1C-201ENST00000327702 KRTAP23-1A1A580 65 aa4.73□□□□□ -1.65
CACNA1C-201ENST00000327702 MEGF8Q7Z7M0 2845 aa4.68□□□□□ -1.66
CACNA1C-201ENST00000327702 KRTAP3-2Q9BYR7 98 aa4.68□□□□□ -1.66
CACNA1C-201ENST00000327702 KRTAP8-1Q8IUC2 63 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms