RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 A8MWP4 228 aa8.5□□□□□ -1.05
PRPF3-201ENST00000324862 CXCL6P80162 114 aa8.49□□□□□ -1.05
PRPF3-201ENST00000324862 A0A087WVE0 104 aa8.49□□□□□ -1.05
PRPF3-201ENST00000324862 J3KT08 172 aa8.48□□□□□ -1.05
PRPF3-201ENST00000324862 HIST1H4AP62805 103 aaKnown RBP8.48□□□□□ -1.05
PRPF3-201ENST00000324862 C9orf92A6NGG3 77 aa8.47□□□□□ -1.05
PRPF3-201ENST00000324862 HMCN2Q8NDA2 5059 aa8.47□□□□□ -1.05
PRPF3-201ENST00000324862 PRR15Q8IV56 129 aa8.46□□□□□ -1.05
PRPF3-201ENST00000324862 IGLV7-46A0A075B6I9 117 aa8.46□□□□□ -1.06
PRPF3-201ENST00000324862 A0A1B0GVX0 72 aa8.46□□□□□ -1.06
PRPF3-201ENST00000324862 ATP5EP2Q5VTU8 51 aa8.45□□□□□ -1.06
PRPF3-201ENST00000324862 NDUFB1O75438 58 aa8.44□□□□□ -1.06
PRPF3-201ENST00000324862 LRP2P98164 4655 aa8.43□□□□□ -1.06
PRPF3-201ENST00000324862 FP248Q71RG6 208 aaPredicted RBP8.41□□□□□ -1.06
PRPF3-201ENST00000324862 WFDC13Q8IUB5 93 aa8.41□□□□□ -1.06
PRPF3-201ENST00000324862 MMP24-AS1A0A0U1RRL7 71 aa8.4□□□□□ -1.07
PRPF3-201ENST00000324862 C8orf17Q9NRJ1 99 aa8.4□□□□□ -1.07
PRPF3-201ENST00000324862 LINC00313P59037 77 aa8.38□□□□□ -1.07
PRPF3-201ENST00000324862 KRTAP13-3Q3SY46 172 aa8.38□□□□□ -1.07
PRPF3-201ENST00000324862 KRTAP16-1A8MUX0 517 aa8.35□□□□□ -1.07
PRPF3-201ENST00000324862 HCG22E2RYF7 251 aa8.35□□□□□ -1.07
PRPF3-201ENST00000324862 hDV103S1A0JD37 113 aa8.33□□□□□ -1.08
PRPF3-201ENST00000324862 CASC2Q6XLA1 102 aa8.33□□□□□ -1.08
PRPF3-201ENST00000324862 C8orf87E5RJ46 101 aa8.31□□□□□ -1.08
PRPF3-201ENST00000324862 IMUPQ9GZP8 106 aa8.31□□□□□ -1.08
PRPF3-201ENST00000324862 TPRXLQ17RH7 258 aa8.3□□□□□ -1.08
PRPF3-201ENST00000324862 XP32Q5T750 250 aa8.3□□□□□ -1.08
PRPF3-201ENST00000324862 FAM236AA0A1B0GUQ0 79 aa8.29□□□□□ -1.08
PRPF3-201ENST00000324862 FAM236BA0A1B0GV22 79 aa8.29□□□□□ -1.08
PRPF3-201ENST00000324862 MRPL34Q9BQ48 92 aaKnown RBP8.28□□□□□ -1.08
PRPF3-201ENST00000324862 TMEM254Q8TBM7 123 aa8.25□□□□□ -1.09
PRPF3-201ENST00000324862 NDUFS5O43920 106 aa8.25□□□□□ -1.09
PRPF3-201ENST00000324862 Q8N9P0 234 aaPredicted RBP8.23□□□□□ -1.09
PRPF3-201ENST00000324862 C20orf166-AS1Q96NR2 134 aa8.21□□□□□ -1.09
PRPF3-201ENST00000324862 UBR4Q5T4S7 5183 aa8.2□□□□□ -1.1
PRPF3-201ENST00000324862 SCGB1A1P11684 91 aa8.2□□□□□ -1.1
PRPF3-201ENST00000324862 A8MUU9 505 aa8.2□□□□□ -1.1
PRPF3-201ENST00000324862 RPL37P61927 97 aaKnown RBP8.17□□□□□ -1.1
PRPF3-201ENST00000324862 Q5W150 140 aa8.17□□□□□ -1.1
PRPF3-201ENST00000324862 MUC2Q02817 5179 aa8.16□□□□□ -1.1
PRPF3-201ENST00000324862 Q75L30 129 aa8.16□□□□□ -1.1
PRPF3-201ENST00000324862 OCR1Q9BZK8 76 aa8.15□□□□□ -1.1
PRPF3-201ENST00000324862 PCOTHQ58A44 107 aa8.12□□□□□ -1.11
PRPF3-201ENST00000324862 ZCCHC13Q8WW36 166 aaKnown RBP8.09□□□□□ -1.11
PRPF3-201ENST00000324862 ATOX1O00244 68 aa8.09□□□□□ -1.11
PRPF3-201ENST00000324862 MUC17Q685J3 4493 aa8.08□□□□□ -1.12
PRPF3-201ENST00000324862 ATP11AUNQ6ZP68 121 aa8.08□□□□□ -1.12
PRPF3-201ENST00000324862 RNF213Q63HN8 5207 aa8.08□□□□□ -1.12
PRPF3-201ENST00000324862 TP53AIP1Q9HCN2 124 aa8.07□□□□□ -1.12
PRPF3-201ENST00000324862 UQCRQO14949 82 aa8.04□□□□□ -1.12
PRPF3-201ENST00000324862 TRAV22A0A0B4J277 110 aa8.03□□□□□ -1.12
PRPF3-201ENST00000324862 TRAV7A0A075B6U4 112 aa8.03□□□□□ -1.12
PRPF3-201ENST00000324862 H0Y9P7 68 aa8.02□□□□□ -1.13
PRPF3-201ENST00000324862 ANAPC13Q9BS18 74 aa8.01□□□□□ -1.13
PRPF3-201ENST00000324862 KRTAP4-1Q9BYQ7 146 aa8.01□□□□□ -1.13
PRPF3-201ENST00000324862 SERP2Q8N6R1 65 aa8□□□□□ -1.13
PRPF3-201ENST00000324862 SEC61BP60468 96 aaKnown RBP8□□□□□ -1.13
PRPF3-201ENST00000324862 IGKV2D-30A0A075B6S6 120 aa7.99□□□□□ -1.13
PRPF3-201ENST00000324862 IGKV2-30P06310 120 aa7.99□□□□□ -1.13
PRPF3-201ENST00000324862 SMIM20Q8N5G0 67 aa7.98□□□□□ -1.13
PRPF3-201ENST00000324862 LINC00208Q96KT6 92 aa7.98□□□□□ -1.13
PRPF3-201ENST00000324862 C5orf47Q569G3 176 aa7.96□□□□□ -1.14
PRPF3-201ENST00000324862 SPINK7P58062 85 aa7.95□□□□□ -1.14
PRPF3-201ENST00000324862 SNURFQ9Y675 71 aa7.95□□□□□ -1.14
PRPF3-201ENST00000324862 COX7CP15954 63 aa7.94□□□□□ -1.14
PRPF3-201ENST00000324862 MP68P56378 58 aa7.94□□□□□ -1.14
PRPF3-201ENST00000324862 C20orf197Q8N268 126 aa7.94□□□□□ -1.14
PRPF3-201ENST00000324862 C1orf64Q8NEQ6 169 aa7.94□□□□□ -1.14
PRPF3-201ENST00000324862 CCDC179H3BU77 68 aa7.91□□□□□ -1.14
PRPF3-201ENST00000324862 CYP4F30PQ9H0H9 118 aa7.9□□□□□ -1.15
PRPF3-201ENST00000324862 CYSTM1Q9H1C7 97 aa7.9□□□□□ -1.15
PRPF3-201ENST00000324862 A0A0U1RQV1 116 aa7.89□□□□□ -1.15
PRPF3-201ENST00000324862 C7orf65Q6ZTY9 151 aa7.88□□□□□ -1.15
PRPF3-201ENST00000324862 KLKP1Q107X0 134 aa7.88□□□□□ -1.15
PRPF3-201ENST00000324862 LOC101927531A0A1B0GV80 90 aa7.87□□□□□ -1.15
PRPF3-201ENST00000324862 HRES1P13985 223 aa7.83□□□□□ -1.16
PRPF3-201ENST00000324862 FAT4Q6V0I7 4981 aa7.83□□□□□ -1.16
PRPF3-201ENST00000324862 PCP4P48539 62 aa7.82□□□□□ -1.16
PRPF3-201ENST00000324862 H3BPC8 53 aa7.82□□□□□ -1.16
PRPF3-201ENST00000324862 C4orf26Q17RF5 130 aa7.82□□□□□ -1.16
PRPF3-201ENST00000324862 MPLKIPQ8TAP9 179 aa7.74□□□□□ -1.17
PRPF3-201ENST00000324862 H7BZZ5 65 aa7.72□□□□□ -1.17
PRPF3-201ENST00000324862 KRTAP3-1Q9BYR8 98 aa7.72□□□□□ -1.17
PRPF3-201ENST00000324862 KRTAP19-2Q3LHN2 52 aa7.71□□□□□ -1.18
PRPF3-201ENST00000324862 COX6B2Q6YFQ2 88 aa7.66□□□□□ -1.18
PRPF3-201ENST00000324862 RBM12B-AS1Q9P1G2 102 aa7.66□□□□□ -1.18
PRPF3-201ENST00000324862 FAM236DA0A1B0GTK5 79 aa7.65□□□□□ -1.18
PRPF3-201ENST00000324862 FAM236CP0DP71 79 aa7.65□□□□□ -1.18
PRPF3-201ENST00000324862 LCE2CQ5TA81 110 aa7.63□□□□□ -1.19
PRPF3-201ENST00000324862 NDUFC1O43677 76 aa7.62□□□□□ -1.19
PRPF3-201ENST00000324862 FLGP20930 4061 aaPredicted RBP7.61□□□□□ -1.19
PRPF3-201ENST00000324862 SPANXA2-OT1Q8N9U9 137 aa7.57□□□□□ -1.2
PRPF3-201ENST00000324862 DMAC1Q96GE9 116 aa7.57□□□□□ -1.2
PRPF3-201ENST00000324862 H1FX-AS1Q4G0G2 97 aa7.54□□□□□ -1.2
PRPF3-201ENST00000324862 TMEM258P61165 79 aa7.5□□□□□ -1.21
PRPF3-201ENST00000324862 A8MUN3 132 aa7.49□□□□□ -1.21
PRPF3-201ENST00000324862 MT1HP80294 61 aa7.48□□□□□ -1.21
PRPF3-201ENST00000324862 LCA10Q71F78 164 aa7.48□□□□□ -1.21
PRPF3-201ENST00000324862 ACYP2P14621 99 aa7.47□□□□□ -1.21
PRPF3-201ENST00000324862 S4R3F8 94 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms