RNA–Protein interactions for RNA: ENST00000322349.12

EEA1-201, Transcript of early endosome antigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EEA1, Length 9,875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EEA1-201ENST00000322349 A6NN06 94 aa5.29□□□□□ -1.56
EEA1-201ENST00000322349 SPEGQ15772 3267 aa5.29□□□□□ -1.56
EEA1-201ENST00000322349 NOTCH1P46531 2555 aa5.27□□□□□ -1.57
EEA1-201ENST00000322349 DSPP15924 2871 aaKnown RBP5.27□□□□□ -1.57
EEA1-201ENST00000322349 PP632Q6XCG6 107 aa5.25□□□□□ -1.57
EEA1-201ENST00000322349 KRTAP13-3Q3SY46 172 aa5.22□□□□□ -1.57
EEA1-201ENST00000322349 IGSF10Q6WRI0 2623 aa5.21□□□□□ -1.58
EEA1-201ENST00000322349 KMT2BQ9UMN6 2715 aaPredicted RBP5.2□□□□□ -1.58
EEA1-201ENST00000322349 KALRNO60229 2985 aa5.2□□□□□ -1.58
EEA1-201ENST00000322349 DMXL2Q8TDJ6 3036 aa5.2□□□□□ -1.58
EEA1-201ENST00000322349 NSD1Q96L73 2696 aaPredicted RBP5.17□□□□□ -1.58
EEA1-201ENST00000322349 UBR5O95071 2799 aaPredicted RBP5.17□□□□□ -1.58
EEA1-201ENST00000322349 TACC2O95359 2948 aa5.16□□□□□ -1.58
EEA1-201ENST00000322349 MAP1AP78559 2803 aaPredicted RBP5.16□□□□□ -1.58
EEA1-201ENST00000322349 APCP25054 2843 aa5.15□□□□□ -1.58
EEA1-201ENST00000322349 LRBAP50851 2863 aa5.15□□□□□ -1.58
EEA1-201ENST00000322349 H0YAA0 97 aa5.15□□□□□ -1.59
EEA1-201ENST00000322349 LAMA1P25391 3075 aa5.14□□□□□ -1.59
EEA1-201ENST00000322349 TRANK1O15050 2925 aa5.14□□□□□ -1.59
EEA1-201ENST00000322349 HIVEP1P15822 2718 aa5.11□□□□□ -1.59
EEA1-201ENST00000322349 USP34Q70CQ2 3546 aa5.11□□□□□ -1.59
EEA1-201ENST00000322349 UTP20O75691 2785 aaKnown RBP5.09□□□□□ -1.59
EEA1-201ENST00000322349 COL12A1Q99715 3063 aa5.09□□□□□ -1.59
EEA1-201ENST00000322349 ASH1LQ9NR48 2969 aaKnown RBP5.09□□□□□ -1.6
EEA1-201ENST00000322349 ATMQ13315 3056 aa5.08□□□□□ -1.6
EEA1-201ENST00000322349 BOD1L1Q8NFC6 3051 aa5.07□□□□□ -1.6
EEA1-201ENST00000322349 ITPR1Q14643 2758 aa5.06□□□□□ -1.6
EEA1-201ENST00000322349 SPTBN5Q9NRC6 3674 aaKnown RBP5.06□□□□□ -1.6
EEA1-201ENST00000322349 CRCT1Q9UGL9 99 aa5.05□□□□□ -1.6
EEA1-201ENST00000322349 TENM4Q6N022 2769 aa5.05□□□□□ -1.6
EEA1-201ENST00000322349 FRYLO94915 3013 aa5.03□□□□□ -1.6
EEA1-201ENST00000322349 MYO15AQ9UKN7 3530 aa5.02□□□□□ -1.61
EEA1-201ENST00000322349 KRTAP12-2P59991 146 aa5.02□□□□□ -1.61
EEA1-201ENST00000322349 EYSQ5T1H1 3165 aa5.02□□□□□ -1.61
EEA1-201ENST00000322349 ASPMQ8IZT6 3477 aa4.98□□□□□ -1.61
EEA1-201ENST00000322349 NBPF19A0A087WUL8 3843 aa4.97□□□□□ -1.61
EEA1-201ENST00000322349 TENM2Q9NT68 2774 aa4.96□□□□□ -1.61
EEA1-201ENST00000322349 ADGRG4Q8IZF6 3080 aa4.95□□□□□ -1.62
EEA1-201ENST00000322349 KRTAP15-1Q3LI76 137 aa4.95□□□□□ -1.62
EEA1-201ENST00000322349 WDFY3Q8IZQ1 3526 aa4.95□□□□□ -1.62
EEA1-201ENST00000322349 ZZEF1O43149 2961 aa4.91□□□□□ -1.62
EEA1-201ENST00000322349 CELSR2Q9HCU4 2923 aa4.9□□□□□ -1.63
EEA1-201ENST00000322349 FLNCQ14315 2725 aa4.89□□□□□ -1.63
EEA1-201ENST00000322349 TENM1Q9UKZ4 2725 aa4.88□□□□□ -1.63
EEA1-201ENST00000322349 NBEAQ8NFP9 2946 aa4.86□□□□□ -1.63
EEA1-201ENST00000322349 LOC400499M0QZD8 3231 aa4.86□□□□□ -1.63
EEA1-201ENST00000322349 KRTAP13-4Q3LI77 160 aa4.85□□□□□ -1.63
EEA1-201ENST00000322349 DCHS2Q6V1P9 2916 aa4.83□□□□□ -1.64
EEA1-201ENST00000322349 DCHS1Q96JQ0 3298 aa4.82□□□□□ -1.64
EEA1-201ENST00000322349 ZFHX4Q86UP3 3567 aa4.82□□□□□ -1.64
EEA1-201ENST00000322349 TNRC18O15417 2968 aaPredicted RBP4.82□□□□□ -1.64
EEA1-201ENST00000322349 CELSR1Q9NYQ6 3014 aa4.81□□□□□ -1.64
EEA1-201ENST00000322349 DMXL1Q9Y485 3027 aa4.8□□□□□ -1.64
EEA1-201ENST00000322349 KRTAP12-1P59990 96 aa4.78□□□□□ -1.64
EEA1-201ENST00000322349 LAMA5O15230 3695 aa4.77□□□□□ -1.65
EEA1-201ENST00000322349 RELNP78509 3460 aa4.71□□□□□ -1.66
EEA1-201ENST00000322349 KRTAP4-5Q9BYR2 181 aa4.7□□□□□ -1.66
EEA1-201ENST00000322349 NF1P21359 2839 aa4.7□□□□□ -1.66
EEA1-201ENST00000322349 PKD1L1Q8TDX9 2849 aa4.68□□□□□ -1.66
EEA1-201ENST00000322349 TGP01266 2768 aa4.67□□□□□ -1.66
EEA1-201ENST00000322349 TENM3Q9P273 2699 aa4.67□□□□□ -1.66
EEA1-201ENST00000322349 KRTAP3-1Q9BYR8 98 aa4.65□□□□□ -1.66
EEA1-201ENST00000322349 CSMD1Q96PZ7 3565 aa4.65□□□□□ -1.67
EEA1-201ENST00000322349 KRTAP10-12P60413 245 aa4.65□□□□□ -1.67
EEA1-201ENST00000322349 VWFP04275 2813 aa4.64□□□□□ -1.67
EEA1-201ENST00000322349 NIPBLQ6KC79 2804 aaeCLIP4.64□□□□□ -1.67
EEA1-201ENST00000322349 LORP23490 312 aaPredicted RBP4.64□□□□□ -1.67
EEA1-201ENST00000322349 ZANQ9Y493 2812 aa4.63□□□□□ -1.67
EEA1-201ENST00000322349 FBN2P35556 2912 aa4.62□□□□□ -1.67
EEA1-201ENST00000322349 ZFHX3Q15911 3703 aa4.6□□□□□ -1.67
EEA1-201ENST00000322349 MT1HL1P0DM35 61 aa4.57□□□□□ -1.68
EEA1-201ENST00000322349 PDZD2O15018 2839 aa4.57□□□□□ -1.68
EEA1-201ENST00000322349 HRNRQ86YZ3 2850 aaPredicted RBP4.56□□□□□ -1.68
EEA1-201ENST00000322349 ANK3Q12955 4377 aaKnown RBP4.56□□□□□ -1.68
EEA1-201ENST00000322349 SPENQ96T58 3664 aaKnown RBP4.55□□□□□ -1.68
EEA1-201ENST00000322349 SMG1Q96Q15 3661 aaKnown RBP4.5□□□□□ -1.69
EEA1-201ENST00000322349 KRTAP8-1Q8IUC2 63 aa4.49□□□□□ -1.69
EEA1-201ENST00000322349 KRTAP10-6P60371 365 aaPredicted RBP4.48□□□□□ -1.69
EEA1-201ENST00000322349 KRTAP10-5P60370 271 aa4.44□□□□□ -1.7
EEA1-201ENST00000322349 CUBNO60494 3623 aa4.44□□□□□ -1.7
EEA1-201ENST00000322349 KRTAP12-3P60328 96 aa4.44□□□□□ -1.7
EEA1-201ENST00000322349 DMDP11532 3685 aa4.43□□□□□ -1.7
EEA1-201ENST00000322349 HUWE1Q7Z6Z7 4374 aaKnown RBP4.43□□□□□ -1.7
EEA1-201ENST00000322349 LCE3AQ5TA76 89 aa4.43□□□□□ -1.7
EEA1-201ENST00000322349 CSMD2Q7Z408 3487 aa4.42□□□□□ -1.7
EEA1-201ENST00000322349 MXRA5Q9NR99 2828 aa4.41□□□□□ -1.7
EEA1-201ENST00000322349 MUC3AQ02505 3323 aa4.39□□□□□ -1.71
EEA1-201ENST00000322349 ALMS1Q8TCU4 4167 aa4.38□□□□□ -1.71
EEA1-201ENST00000322349 SVEP1Q4LDE5 3571 aa4.37□□□□□ -1.71
EEA1-201ENST00000322349 FBN1P35555 2871 aaKnown RBP4.32□□□□□ -1.72
EEA1-201ENST00000322349 KRTAP3-3Q9BYR6 98 aa4.32□□□□□ -1.72
EEA1-201ENST00000322349 FBN3Q75N90 2809 aa4.3□□□□□ -1.72
EEA1-201ENST00000322349 TRRAPQ9Y4A5 3859 aa4.29□□□□□ -1.72
EEA1-201ENST00000322349 INE1O15225 51 aa4.29□□□□□ -1.72
EEA1-201ENST00000322349 KRTAP3-2Q9BYR7 98 aa4.28□□□□□ -1.72
EEA1-201ENST00000322349 MEGF8Q7Z7M0 2845 aa4.25□□□□□ -1.73
EEA1-201ENST00000322349 SRRM2Q9UQ35 2752 aaKnown RBP4.25□□□□□ -1.73
EEA1-201ENST00000322349 KRTAP10-4P60372 401 aaPredicted RBP4.24□□□□□ -1.73
EEA1-201ENST00000322349 SPRR2FQ96RM1 72 aa4.22□□□□□ -1.73
EEA1-201ENST00000322349 COL7A1Q02388 2944 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms