RNA–Protein interactions for RNA: ENST00000320672.8

SSBP2-201, Transcript of single stranded DNA binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP2, Length 8,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-201ENST00000320672 LOC400499M0QZD8 3231 aa4.9□□□□□ -1.63
SSBP2-201ENST00000320672 ASPMQ8IZT6 3477 aa4.9□□□□□ -1.63
SSBP2-201ENST00000320672 UNC79Q9P2D8 2635 aa4.89□□□□□ -1.63
SSBP2-201ENST00000320672 UBR5O95071 2799 aaPredicted RBP4.88□□□□□ -1.63
SSBP2-201ENST00000320672 STAB1Q9NY15 2570 aa4.88□□□□□ -1.63
SSBP2-201ENST00000320672 ITPR1Q14643 2758 aa4.88□□□□□ -1.63
SSBP2-201ENST00000320672 ZFHX4Q86UP3 3567 aa4.86□□□□□ -1.63
SSBP2-201ENST00000320672 NOTCH1P46531 2555 aa4.85□□□□□ -1.63
SSBP2-201ENST00000320672 KRTAP25-1Q3LHN0 102 aa4.84□□□□□ -1.63
SSBP2-201ENST00000320672 NBEAL1Q6ZS30 2694 aa4.84□□□□□ -1.63
SSBP2-201ENST00000320672 WDFY3Q8IZQ1 3526 aa4.84□□□□□ -1.63
SSBP2-201ENST00000320672 FLNCQ14315 2725 aa4.84□□□□□ -1.64
SSBP2-201ENST00000320672 DMXL1Q9Y485 3027 aa4.82□□□□□ -1.64
SSBP2-201ENST00000320672 DMBT1Q9UGM3 2413 aaPredicted RBP4.82□□□□□ -1.64
SSBP2-201ENST00000320672 A6NN06 94 aa4.81□□□□□ -1.64
SSBP2-201ENST00000320672 KRTAP10-8P60410 259 aa4.81□□□□□ -1.64
SSBP2-201ENST00000320672 RELNP78509 3460 aa4.8□□□□□ -1.64
SSBP2-201ENST00000320672 HIVEP1P15822 2718 aa4.79□□□□□ -1.64
SSBP2-201ENST00000320672 COL6A5A8TX70 2615 aa4.79□□□□□ -1.64
SSBP2-201ENST00000320672 KMT2BQ9UMN6 2715 aaPredicted RBP4.78□□□□□ -1.64
SSBP2-201ENST00000320672 BAHCC1Q9P281 2608 aa4.78□□□□□ -1.64
SSBP2-201ENST00000320672 STAB2Q8WWQ8 2551 aa4.78□□□□□ -1.64
SSBP2-201ENST00000320672 KRTAP13-1Q8IUC0 172 aa4.77□□□□□ -1.65
SSBP2-201ENST00000320672 UTP20O75691 2785 aaKnown RBP4.76□□□□□ -1.65
SSBP2-201ENST00000320672 TNRC18O15417 2968 aaPredicted RBP4.76□□□□□ -1.65
SSBP2-201ENST00000320672 KRTAP16-1A8MUX0 517 aa4.75□□□□□ -1.65
SSBP2-201ENST00000320672 NSD1Q96L73 2696 aaPredicted RBP4.74□□□□□ -1.65
SSBP2-201ENST00000320672 FLG2Q5D862 2391 aaPredicted RBP4.72□□□□□ -1.65
SSBP2-201ENST00000320672 CSMD1Q96PZ7 3565 aa4.72□□□□□ -1.65
SSBP2-201ENST00000320672 ZANQ9Y493 2812 aa4.72□□□□□ -1.65
SSBP2-201ENST00000320672 HRNRQ86YZ3 2850 aaPredicted RBP4.71□□□□□ -1.65
SSBP2-201ENST00000320672 TNP1P09430 55 aa4.68□□□□□ -1.66
SSBP2-201ENST00000320672 XP32Q5T750 250 aa4.68□□□□□ -1.66
SSBP2-201ENST00000320672 KRTAP10-10P60014 251 aa4.67□□□□□ -1.66
SSBP2-201ENST00000320672 LAMA5O15230 3695 aa4.66□□□□□ -1.66
SSBP2-201ENST00000320672 KRTAP1-4P0C5Y4 121 aa4.66□□□□□ -1.66
SSBP2-201ENST00000320672 DMDP11532 3685 aa4.66□□□□□ -1.66
SSBP2-201ENST00000320672 FBN2P35556 2912 aa4.65□□□□□ -1.66
SSBP2-201ENST00000320672 P0C880 135 aa4.64□□□□□ -1.67
SSBP2-201ENST00000320672 CELSR2Q9HCU4 2923 aa4.64□□□□□ -1.67
SSBP2-201ENST00000320672 ASB16-AS1Q495Z4 193 aa4.63□□□□□ -1.67
SSBP2-201ENST00000320672 H0YAA0 97 aa4.62□□□□□ -1.67
SSBP2-201ENST00000320672 SMG1Q96Q15 3661 aaKnown RBP4.62□□□□□ -1.67
SSBP2-201ENST00000320672 DCHS2Q6V1P9 2916 aa4.61□□□□□ -1.67
SSBP2-201ENST00000320672 MUC3AQ02505 3323 aa4.61□□□□□ -1.67
SSBP2-201ENST00000320672 CUBNO60494 3623 aa4.6□□□□□ -1.67
SSBP2-201ENST00000320672 APCP25054 2843 aa4.6□□□□□ -1.67
SSBP2-201ENST00000320672 ITPR2Q14571 2701 aa4.56□□□□□ -1.68
SSBP2-201ENST00000320672 TENM4Q6N022 2769 aa4.56□□□□□ -1.68
SSBP2-201ENST00000320672 SVEP1Q4LDE5 3571 aa4.55□□□□□ -1.68
SSBP2-201ENST00000320672 RPS29P62273 56 aaKnown RBP4.55□□□□□ -1.68
SSBP2-201ENST00000320672 TENM2Q9NT68 2774 aa4.53□□□□□ -1.68
SSBP2-201ENST00000320672 NIPBLQ6KC79 2804 aaeCLIP4.53□□□□□ -1.68
SSBP2-201ENST00000320672 NF1P21359 2839 aa4.5□□□□□ -1.69
SSBP2-201ENST00000320672 CELSR1Q9NYQ6 3014 aa4.48□□□□□ -1.69
SSBP2-201ENST00000320672 CSMD2Q7Z408 3487 aa4.47□□□□□ -1.69
SSBP2-201ENST00000320672 KRTAP12-2P59991 146 aa4.46□□□□□ -1.7
SSBP2-201ENST00000320672 KRTAP13-3Q3SY46 172 aa4.43□□□□□ -1.7
SSBP2-201ENST00000320672 MXRA5Q9NR99 2828 aa4.43□□□□□ -1.7
SSBP2-201ENST00000320672 NBPF19A0A087WUL8 3843 aa4.41□□□□□ -1.7
SSBP2-201ENST00000320672 TENM3Q9P273 2699 aa4.4□□□□□ -1.7
SSBP2-201ENST00000320672 CRCT1Q9UGL9 99 aa4.38□□□□□ -1.71
SSBP2-201ENST00000320672 TPRXLQ17RH7 258 aa4.35□□□□□ -1.71
SSBP2-201ENST00000320672 TENM1Q9UKZ4 2725 aa4.34□□□□□ -1.71
SSBP2-201ENST00000320672 ANK3Q12955 4377 aaKnown RBP4.33□□□□□ -1.72
SSBP2-201ENST00000320672 SPENQ96T58 3664 aaKnown RBP4.31□□□□□ -1.72
SSBP2-201ENST00000320672 PKD1L1Q8TDX9 2849 aa4.31□□□□□ -1.72
SSBP2-201ENST00000320672 VWFP04275 2813 aa4.3□□□□□ -1.72
SSBP2-201ENST00000320672 PDZD2O15018 2839 aa4.29□□□□□ -1.72
SSBP2-201ENST00000320672 KRTAP3-1Q9BYR8 98 aa4.29□□□□□ -1.72
SSBP2-201ENST00000320672 KRTAP13-4Q3LI77 160 aa4.27□□□□□ -1.73
SSBP2-201ENST00000320672 FBN1P35555 2871 aaKnown RBP4.27□□□□□ -1.73
SSBP2-201ENST00000320672 OTOGQ6ZRI0 2925 aa4.26□□□□□ -1.73
SSBP2-201ENST00000320672 PP632Q6XCG6 107 aa4.25□□□□□ -1.73
SSBP2-201ENST00000320672 KRTAP12-1P59990 96 aa4.24□□□□□ -1.73
SSBP2-201ENST00000320672 PRO2289Q9P1D8 64 aa4.24□□□□□ -1.73
SSBP2-201ENST00000320672 KRTAP21-3Q3LHN1 58 aa4.23□□□□□ -1.73
SSBP2-201ENST00000320672 KRTAP4-5Q9BYR2 181 aa4.23□□□□□ -1.73
SSBP2-201ENST00000320672 ZFHX3Q15911 3703 aa4.21□□□□□ -1.74
SSBP2-201ENST00000320672 TGP01266 2768 aa4.21□□□□□ -1.74
SSBP2-201ENST00000320672 KRTAP15-1Q3LI76 137 aa4.18□□□□□ -1.74
SSBP2-201ENST00000320672 BSNQ9UPA5 3926 aa4.08□□□□□ -1.76
SSBP2-201ENST00000320672 KRTAP10-6P60371 365 aaPredicted RBP4.08□□□□□ -1.76
SSBP2-201ENST00000320672 TRRAPQ9Y4A5 3859 aa4.05□□□□□ -1.76
SSBP2-201ENST00000320672 SRRM2Q9UQ35 2752 aaKnown RBP4.05□□□□□ -1.76
SSBP2-201ENST00000320672 HUWE1Q7Z6Z7 4374 aaKnown RBP4.04□□□□□ -1.76
SSBP2-201ENST00000320672 LORP23490 312 aaPredicted RBP4.03□□□□□ -1.76
SSBP2-201ENST00000320672 CSMD3Q7Z407 3707 aa4.02□□□□□ -1.77
SSBP2-201ENST00000320672 MT1HL1P0DM35 61 aa4□□□□□ -1.77
SSBP2-201ENST00000320672 FBN3Q75N90 2809 aa3.99□□□□□ -1.77
SSBP2-201ENST00000320672 DNHD1Q96M86 4753 aa3.97□□□□□ -1.77
SSBP2-201ENST00000320672 KRTAP3-3Q9BYR6 98 aa3.95□□□□□ -1.78
SSBP2-201ENST00000320672 DNAH5Q8TE73 4624 aa3.94□□□□□ -1.78
SSBP2-201ENST00000320672 VPS13CQ709C8 3753 aa3.94□□□□□ -1.78
SSBP2-201ENST00000320672 KRTAP3-2Q9BYR7 98 aa3.92□□□□□ -1.78
SSBP2-201ENST00000320672 PLECQ15149 4684 aaKnown RBP3.92□□□□□ -1.78
SSBP2-201ENST00000320672 LCE3AQ5TA76 89 aa3.91□□□□□ -1.78
SSBP2-201ENST00000320672 MEGF8Q7Z7M0 2845 aa3.9□□□□□ -1.79
SSBP2-201ENST00000320672 KRTAP10-12P60413 245 aa3.89□□□□□ -1.79
SSBP2-201ENST00000320672 DYNC1H1Q14204 4646 aaKnown RBP3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms