RNA–Protein interactions for RNA: ENST00000317233.8

AFF3-201, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 8,135 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-201ENST00000317233 CELSR3Q9NYQ7 3312 aa7.25□□□□□ -1.25
AFF3-201ENST00000317233 TNRC18O15417 2968 aaPredicted RBP7.25□□□□□ -1.25
AFF3-201ENST00000317233 KALRNO60229 2985 aa7.24□□□□□ -1.25
AFF3-201ENST00000317233 LAMA1P25391 3075 aa7.23□□□□□ -1.25
AFF3-201ENST00000317233 NF1P21359 2839 aa7.23□□□□□ -1.25
AFF3-201ENST00000317233 VPS13AQ96RL7 3174 aa7.21□□□□□ -1.26
AFF3-201ENST00000317233 RANBP2P49792 3224 aaKnown RBP7.2□□□□□ -1.26
AFF3-201ENST00000317233 HTTP42858 3142 aa7.18□□□□□ -1.26
AFF3-201ENST00000317233 PDZD2O15018 2839 aa7.16□□□□□ -1.26
AFF3-201ENST00000317233 CHD7Q9P2D1 2997 aa7.15□□□□□ -1.26
AFF3-201ENST00000317233 HIVEP1P15822 2718 aa7.13□□□□□ -1.27
AFF3-201ENST00000317233 MKI67P46013 3256 aaKnown RBP7.1□□□□□ -1.27
AFF3-201ENST00000317233 KRTAP13-2Q52LG2 175 aa7.1□□□□□ -1.27
AFF3-201ENST00000317233 CELSR2Q9HCU4 2923 aa7.05□□□□□ -1.28
AFF3-201ENST00000317233 NIPBLQ6KC79 2804 aaeCLIP7.05□□□□□ -1.28
AFF3-201ENST00000317233 ZZEF1O43149 2961 aa7.04□□□□□ -1.28
AFF3-201ENST00000317233 DNAH14Q0VDD8 3507 aa7.02□□□□□ -1.29
AFF3-201ENST00000317233 ATMQ13315 3056 aa6.98□□□□□ -1.29
AFF3-201ENST00000317233 TGP01266 2768 aa6.97□□□□□ -1.29
AFF3-201ENST00000317233 XP32Q5T750 250 aa6.96□□□□□ -1.29
AFF3-201ENST00000317233 CELSR1Q9NYQ6 3014 aa6.95□□□□□ -1.3
AFF3-201ENST00000317233 VCANP13611 3396 aa6.93□□□□□ -1.3
AFF3-201ENST00000317233 TPRXLQ17RH7 258 aa6.92□□□□□ -1.3
AFF3-201ENST00000317233 H0YAA0 97 aa6.92□□□□□ -1.3
AFF3-201ENST00000317233 LAMA3Q16787 3333 aa6.91□□□□□ -1.3
AFF3-201ENST00000317233 BRCA2P51587 3418 aa6.91□□□□□ -1.3
AFF3-201ENST00000317233 CFAP47Q6ZTR5 3102 aa6.9□□□□□ -1.3
AFF3-201ENST00000317233 ADGRG4Q8IZF6 3080 aa6.89□□□□□ -1.31
AFF3-201ENST00000317233 BOD1L1Q8NFC6 3051 aa6.89□□□□□ -1.31
AFF3-201ENST00000317233 KRTAP13-1Q8IUC0 172 aa6.88□□□□□ -1.31
AFF3-201ENST00000317233 SPEGQ15772 3267 aa6.88□□□□□ -1.31
AFF3-201ENST00000317233 COL6A3P12111 3177 aa6.86□□□□□ -1.31
AFF3-201ENST00000317233 TENM4Q6N022 2769 aa6.85□□□□□ -1.31
AFF3-201ENST00000317233 TACC2O95359 2948 aa6.83□□□□□ -1.32
AFF3-201ENST00000317233 KRTAP12-2P59991 146 aa6.83□□□□□ -1.32
AFF3-201ENST00000317233 PKD1L1Q8TDX9 2849 aa6.79□□□□□ -1.32
AFF3-201ENST00000317233 VWFP04275 2813 aa6.79□□□□□ -1.32
AFF3-201ENST00000317233 SZT2Q5T011 3432 aa6.79□□□□□ -1.32
AFF3-201ENST00000317233 DCHS2Q6V1P9 2916 aa6.76□□□□□ -1.33
AFF3-201ENST00000317233 ZFHX4Q86UP3 3567 aa6.76□□□□□ -1.33
AFF3-201ENST00000317233 KRTAP7-1Q8IUC3 87 aa6.75□□□□□ -1.33
AFF3-201ENST00000317233 NBEAQ8NFP9 2946 aa6.74□□□□□ -1.33
AFF3-201ENST00000317233 DMXL1Q9Y485 3027 aa6.73□□□□□ -1.33
AFF3-201ENST00000317233 USP34Q70CQ2 3546 aa6.73□□□□□ -1.33
AFF3-201ENST00000317233 KRTAP21-3Q3LHN1 58 aa6.73□□□□□ -1.33
AFF3-201ENST00000317233 SRRM2Q9UQ35 2752 aaKnown RBP6.73□□□□□ -1.33
AFF3-201ENST00000317233 ZANQ9Y493 2812 aa6.71□□□□□ -1.33
AFF3-201ENST00000317233 TENM2Q9NT68 2774 aa6.71□□□□□ -1.34
AFF3-201ENST00000317233 KRTAP15-1Q3LI76 137 aa6.7□□□□□ -1.34
AFF3-201ENST00000317233 CDH23Q9H251 3354 aa6.69□□□□□ -1.34
AFF3-201ENST00000317233 KRTAP13-4Q3LI77 160 aa6.63□□□□□ -1.35
AFF3-201ENST00000317233 KRTAP13-3Q3SY46 172 aa6.59□□□□□ -1.35
AFF3-201ENST00000317233 KRTAP1-4P0C5Y4 121 aa6.56□□□□□ -1.36
AFF3-201ENST00000317233 COL7A1Q02388 2944 aa6.54□□□□□ -1.36
AFF3-201ENST00000317233 INE1O15225 51 aa6.49□□□□□ -1.37
AFF3-201ENST00000317233 CRCT1Q9UGL9 99 aa6.47□□□□□ -1.37
AFF3-201ENST00000317233 NBPF19A0A087WUL8 3843 aa6.44□□□□□ -1.38
AFF3-201ENST00000317233 MEGF8Q7Z7M0 2845 aa6.42□□□□□ -1.38
AFF3-201ENST00000317233 FBN2P35556 2912 aa6.42□□□□□ -1.38
AFF3-201ENST00000317233 EYSQ5T1H1 3165 aa6.4□□□□□ -1.38
AFF3-201ENST00000317233 ASPMQ8IZT6 3477 aa6.36□□□□□ -1.39
AFF3-201ENST00000317233 LOC400499M0QZD8 3231 aa6.35□□□□□ -1.39
AFF3-201ENST00000317233 KRTAP12-1P59990 96 aa6.34□□□□□ -1.39
AFF3-201ENST00000317233 SPTBN5Q9NRC6 3674 aaKnown RBP6.29□□□□□ -1.4
AFF3-201ENST00000317233 MXRA5Q9NR99 2828 aa6.28□□□□□ -1.4
AFF3-201ENST00000317233 WDFY3Q8IZQ1 3526 aa6.26□□□□□ -1.41
AFF3-201ENST00000317233 MYO15AQ9UKN7 3530 aa6.21□□□□□ -1.41
AFF3-201ENST00000317233 KRTAP10-6P60371 365 aaPredicted RBP6.19□□□□□ -1.42
AFF3-201ENST00000317233 KRTAP10-12P60413 245 aa6.18□□□□□ -1.42
AFF3-201ENST00000317233 ZFHX3Q15911 3703 aa6.17□□□□□ -1.42
AFF3-201ENST00000317233 FBN3Q75N90 2809 aa6.12□□□□□ -1.43
AFF3-201ENST00000317233 HRNRQ86YZ3 2850 aaPredicted RBP6.11□□□□□ -1.43
AFF3-201ENST00000317233 OTOGQ6ZRI0 2925 aa6.1□□□□□ -1.43
AFF3-201ENST00000317233 DCHS1Q96JQ0 3298 aa6.06□□□□□ -1.44
AFF3-201ENST00000317233 LAMA5O15230 3695 aa6.04□□□□□ -1.44
AFF3-201ENST00000317233 SPENQ96T58 3664 aaKnown RBP6.01□□□□□ -1.45
AFF3-201ENST00000317233 KRTAP10-5P60370 271 aa5.99□□□□□ -1.45
AFF3-201ENST00000317233 CSMD1Q96PZ7 3565 aa5.96□□□□□ -1.45
AFF3-201ENST00000317233 RELNP78509 3460 aa5.93□□□□□ -1.46
AFF3-201ENST00000317233 KRTAP12-3P60328 96 aa5.93□□□□□ -1.46
AFF3-201ENST00000317233 SMG1Q96Q15 3661 aaKnown RBP5.85□□□□□ -1.47
AFF3-201ENST00000317233 DMDP11532 3685 aa5.81□□□□□ -1.48
AFF3-201ENST00000317233 KRTAP3-1Q9BYR8 98 aa5.79□□□□□ -1.48
AFF3-201ENST00000317233 KRTAP8-1Q8IUC2 63 aa5.79□□□□□ -1.48
AFF3-201ENST00000317233 FBN1P35555 2871 aaKnown RBP5.75□□□□□ -1.49
AFF3-201ENST00000317233 MUC3AQ02505 3323 aa5.71□□□□□ -1.49
AFF3-201ENST00000317233 KRTAP23-1A1A580 65 aa5.7□□□□□ -1.5
AFF3-201ENST00000317233 LORP23490 312 aaPredicted RBP5.69□□□□□ -1.5
AFF3-201ENST00000317233 LCE3AQ5TA76 89 aa5.68□□□□□ -1.5
AFF3-201ENST00000317233 SVEP1Q4LDE5 3571 aa5.67□□□□□ -1.5
AFF3-201ENST00000317233 CUBNO60494 3623 aa5.66□□□□□ -1.5
AFF3-201ENST00000317233 KRTAP10-7P60409 375 aaPredicted RBP5.56□□□□□ -1.52
AFF3-201ENST00000317233 TRRAPQ9Y4A5 3859 aa5.55□□□□□ -1.52
AFF3-201ENST00000317233 CSMD3Q7Z407 3707 aa5.55□□□□□ -1.52
AFF3-201ENST00000317233 CSMD2Q7Z408 3487 aa5.51□□□□□ -1.53
AFF3-201ENST00000317233 VPS13CQ709C8 3753 aa5.47□□□□□ -1.53
AFF3-201ENST00000317233 KRTAP3-2Q9BYR7 98 aa5.41□□□□□ -1.54
AFF3-201ENST00000317233 KRTAP3-3Q9BYR6 98 aa5.4□□□□□ -1.54
AFF3-201ENST00000317233 MT1HL1P0DM35 61 aa5.35□□□□□ -1.55
AFF3-201ENST00000317233 BSNQ9UPA5 3926 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms