RNA–Protein interactions for RNA: ENST00000317173.8

MSRA-201, Transcript of methionine sulfoxide reductase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRA, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-201ENST00000317173 MT-ATP8P03928 68 aa7.98□□□□□ -1.13
MSRA-201ENST00000317173 NDUFB1O75438 58 aa7.97□□□□□ -1.13
MSRA-201ENST00000317173 PRR15Q8IV56 129 aa7.93□□□□□ -1.14
MSRA-201ENST00000317173 UBR4Q5T4S7 5183 aa7.93□□□□□ -1.14
MSRA-201ENST00000317173 K7EQZ3 153 aa7.93□□□□□ -1.14
MSRA-201ENST00000317173 HIST1H4AP62805 103 aaKnown RBP7.93□□□□□ -1.14
MSRA-201ENST00000317173 A0A1B0GVX0 72 aa7.92□□□□□ -1.14
MSRA-201ENST00000317173 FP248Q71RG6 208 aaPredicted RBP7.92□□□□□ -1.14
MSRA-201ENST00000317173 LRP2P98164 4655 aa7.9□□□□□ -1.14
MSRA-201ENST00000317173 Q8N9L7 120 aa7.9□□□□□ -1.14
MSRA-201ENST00000317173 C8orf87E5RJ46 101 aa7.88□□□□□ -1.15
MSRA-201ENST00000317173 RETNLBQ9BQ08 111 aa7.87□□□□□ -1.15
MSRA-201ENST00000317173 IGHV6-1A0A0B4J1U7 121 aa7.86□□□□□ -1.15
MSRA-201ENST00000317173 A0A087WVE0 104 aa7.85□□□□□ -1.15
MSRA-201ENST00000317173 C8orf17Q9NRJ1 99 aa7.85□□□□□ -1.15
MSRA-201ENST00000317173 HCG22E2RYF7 251 aa7.84□□□□□ -1.15
MSRA-201ENST00000317173 MMP24-AS1A0A0U1RRL7 71 aa7.83□□□□□ -1.16
MSRA-201ENST00000317173 LINC00313P59037 77 aa7.83□□□□□ -1.16
MSRA-201ENST00000317173 PRR4Q16378 134 aa7.83□□□□□ -1.16
MSRA-201ENST00000317173 IGLV7-46A0A075B6I9 117 aa7.8□□□□□ -1.16
MSRA-201ENST00000317173 CASC2Q6XLA1 102 aa7.8□□□□□ -1.16
MSRA-201ENST00000317173 hDV103S1A0JD37 113 aa7.79□□□□□ -1.16
MSRA-201ENST00000317173 FAM236AA0A1B0GUQ0 79 aa7.78□□□□□ -1.16
MSRA-201ENST00000317173 FAM236BA0A1B0GV22 79 aa7.78□□□□□ -1.16
MSRA-201ENST00000317173 TMEM254Q8TBM7 123 aa7.78□□□□□ -1.16
MSRA-201ENST00000317173 NOTCH2NLQ7Z3S9 236 aa7.78□□□□□ -1.16
MSRA-201ENST00000317173 WFDC13Q8IUB5 93 aa7.78□□□□□ -1.16
MSRA-201ENST00000317173 MRPL34Q9BQ48 92 aaKnown RBP7.77□□□□□ -1.17
MSRA-201ENST00000317173 KRTAP16-1A8MUX0 517 aa7.74□□□□□ -1.17
MSRA-201ENST00000317173 LPAP08519 4548 aa7.74□□□□□ -1.17
MSRA-201ENST00000317173 ATOX1O00244 68 aa7.73□□□□□ -1.17
MSRA-201ENST00000317173 TPRXLQ17RH7 258 aa7.73□□□□□ -1.17
MSRA-201ENST00000317173 KRTAP13-3Q3SY46 172 aa7.73□□□□□ -1.17
MSRA-201ENST00000317173 C9orf92A6NGG3 77 aa7.72□□□□□ -1.17
MSRA-201ENST00000317173 RNF213Q63HN8 5207 aa7.71□□□□□ -1.17
MSRA-201ENST00000317173 SMIM20Q8N5G0 67 aa7.71□□□□□ -1.18
MSRA-201ENST00000317173 Q8N9P0 234 aaPredicted RBP7.71□□□□□ -1.18
MSRA-201ENST00000317173 TP53AIP1Q9HCN2 124 aa7.68□□□□□ -1.18
MSRA-201ENST00000317173 C20orf166-AS1Q96NR2 134 aa7.68□□□□□ -1.18
MSRA-201ENST00000317173 ANAPC13Q9BS18 74 aa7.68□□□□□ -1.18
MSRA-201ENST00000317173 A8MUU9 505 aa7.66□□□□□ -1.18
MSRA-201ENST00000317173 NDUFS5O43920 106 aa7.66□□□□□ -1.18
MSRA-201ENST00000317173 OCR1Q9BZK8 76 aa7.66□□□□□ -1.18
MSRA-201ENST00000317173 Q75L30 129 aa7.64□□□□□ -1.19
MSRA-201ENST00000317173 TRAV7A0A075B6U4 112 aa7.63□□□□□ -1.19
MSRA-201ENST00000317173 UQCRQO14949 82 aa7.63□□□□□ -1.19
MSRA-201ENST00000317173 XP32Q5T750 250 aa7.63□□□□□ -1.19
MSRA-201ENST00000317173 SERP2Q8N6R1 65 aa7.61□□□□□ -1.19
MSRA-201ENST00000317173 RPL37P61927 97 aaKnown RBP7.59□□□□□ -1.19
MSRA-201ENST00000317173 C5orf47Q569G3 176 aa7.57□□□□□ -1.2
MSRA-201ENST00000317173 TRAV22A0A0B4J277 110 aa7.57□□□□□ -1.2
MSRA-201ENST00000317173 ZCCHC13Q8WW36 166 aaKnown RBP7.56□□□□□ -1.2
MSRA-201ENST00000317173 COX7CP15954 63 aa7.55□□□□□ -1.2
MSRA-201ENST00000317173 MP68P56378 58 aa7.53□□□□□ -1.2
MSRA-201ENST00000317173 ATP11AUNQ6ZP68 121 aa7.53□□□□□ -1.2
MSRA-201ENST00000317173 H3BPC8 53 aa7.52□□□□□ -1.2
MSRA-201ENST00000317173 H0Y9P7 68 aa7.52□□□□□ -1.21
MSRA-201ENST00000317173 Q5W150 140 aa7.52□□□□□ -1.21
MSRA-201ENST00000317173 A0A0U1RQV1 116 aa7.51□□□□□ -1.21
MSRA-201ENST00000317173 LCE2DQ5TA82 110 aaPredicted RBP7.49□□□□□ -1.21
MSRA-201ENST00000317173 MUC2Q02817 5179 aa7.48□□□□□ -1.21
MSRA-201ENST00000317173 SEC61BP60468 96 aaKnown RBP7.47□□□□□ -1.21
MSRA-201ENST00000317173 LOC101927531A0A1B0GV80 90 aa7.46□□□□□ -1.22
MSRA-201ENST00000317173 CCDC179H3BU77 68 aa7.46□□□□□ -1.22
MSRA-201ENST00000317173 MUC17Q685J3 4493 aa7.46□□□□□ -1.22
MSRA-201ENST00000317173 C20orf197Q8N268 126 aa7.45□□□□□ -1.22
MSRA-201ENST00000317173 C1orf64Q8NEQ6 169 aa7.45□□□□□ -1.22
MSRA-201ENST00000317173 LINC00208Q96KT6 92 aa7.45□□□□□ -1.22
MSRA-201ENST00000317173 IGKV2-30P06310 120 aa7.43□□□□□ -1.22
MSRA-201ENST00000317173 KLKP1Q107X0 134 aa7.43□□□□□ -1.22
MSRA-201ENST00000317173 PCOTHQ58A44 107 aa7.42□□□□□ -1.22
MSRA-201ENST00000317173 C7orf65Q6ZTY9 151 aa7.42□□□□□ -1.22
MSRA-201ENST00000317173 CYP4F30PQ9H0H9 118 aa7.38□□□□□ -1.23
MSRA-201ENST00000317173 SNURFQ9Y675 71 aa7.38□□□□□ -1.23
MSRA-201ENST00000317173 IGKV2D-30A0A075B6S6 120 aa7.37□□□□□ -1.23
MSRA-201ENST00000317173 NDUFC1O43677 76 aa7.37□□□□□ -1.23
MSRA-201ENST00000317173 SPINK7P58062 85 aa7.37□□□□□ -1.23
MSRA-201ENST00000317173 FAT4Q6V0I7 4981 aa7.33□□□□□ -1.24
MSRA-201ENST00000317173 H7BZZ5 65 aa7.28□□□□□ -1.24
MSRA-201ENST00000317173 CYSTM1Q9H1C7 97 aa7.28□□□□□ -1.24
MSRA-201ENST00000317173 RPS28P62857 69 aaKnown RBP7.27□□□□□ -1.25
MSRA-201ENST00000317173 TMEM258P61165 79 aa7.27□□□□□ -1.25
MSRA-201ENST00000317173 LCE2AQ5TA79 106 aaPredicted RBP7.27□□□□□ -1.25
MSRA-201ENST00000317173 HRES1P13985 223 aa7.26□□□□□ -1.25
MSRA-201ENST00000317173 KRTAP4-1Q9BYQ7 146 aa7.26□□□□□ -1.25
MSRA-201ENST00000317173 SPANXA2-OT1Q8N9U9 137 aa7.25□□□□□ -1.25
MSRA-201ENST00000317173 C4orf26Q17RF5 130 aa7.19□□□□□ -1.26
MSRA-201ENST00000317173 MPLKIPQ8TAP9 179 aa7.19□□□□□ -1.26
MSRA-201ENST00000317173 ATP5EP56381 51 aaPredicted RBP7.18□□□□□ -1.26
MSRA-201ENST00000317173 RBM12B-AS1Q9P1G2 102 aa7.18□□□□□ -1.26
MSRA-201ENST00000317173 COX6B2Q6YFQ2 88 aa7.17□□□□□ -1.26
MSRA-201ENST00000317173 A8MUN3 132 aa7.17□□□□□ -1.26
MSRA-201ENST00000317173 FAM236DA0A1B0GTK5 79 aa7.14□□□□□ -1.27
MSRA-201ENST00000317173 FAM236CP0DP71 79 aa7.14□□□□□ -1.27
MSRA-201ENST00000317173 DMAC1Q96GE9 116 aa7.14□□□□□ -1.27
MSRA-201ENST00000317173 SVIPQ8NHG7 77 aa7.11□□□□□ -1.27
MSRA-201ENST00000317173 ACYP2P14621 99 aa7.09□□□□□ -1.27
MSRA-201ENST00000317173 KRTAP19-2Q3LHN2 52 aa7.08□□□□□ -1.28
MSRA-201ENST00000317173 LCE2CQ5TA81 110 aa7.08□□□□□ -1.28
MSRA-201ENST00000317173 KRTAP3-1Q9BYR8 98 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms