RNA–Protein interactions for RNA: ENST00000315684.12

CTC1-201, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTC1, Length 7,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-201ENST00000315684 FP248Q71RG6 208 aaPredicted RBP5.23□□□□□ -1.57
CTC1-201ENST00000315684 CELSR1Q9NYQ6 3014 aa5.21□□□□□ -1.57
CTC1-201ENST00000315684 LUZP6Q538Z0 58 aa5.21□□□□□ -1.58
CTC1-201ENST00000315684 LINC00483Q53H64 154 aa5.21□□□□□ -1.58
CTC1-201ENST00000315684 LCA10Q71F78 164 aa5.2□□□□□ -1.58
CTC1-201ENST00000315684 CYP4F30PQ9H0H9 118 aa5.2□□□□□ -1.58
CTC1-201ENST00000315684 LINC00472Q9H8W2 130 aa5.2□□□□□ -1.58
CTC1-201ENST00000315684 TENM2Q9NT68 2774 aa5.19□□□□□ -1.58
CTC1-201ENST00000315684 SPRR1BP22528 89 aa5.19□□□□□ -1.58
CTC1-201ENST00000315684 SPENQ96T58 3664 aaKnown RBP5.19□□□□□ -1.58
CTC1-201ENST00000315684 SVEP1Q4LDE5 3571 aa5.18□□□□□ -1.58
CTC1-201ENST00000315684 KTN1-AS1Q86SY8 53 aa5.17□□□□□ -1.58
CTC1-201ENST00000315684 M0QZ58 72 aa5.17□□□□□ -1.58
CTC1-201ENST00000315684 KRTAP13-2Q52LG2 175 aa5.17□□□□□ -1.58
CTC1-201ENST00000315684 KRTAP7-1Q8IUC3 87 aa5.16□□□□□ -1.58
CTC1-201ENST00000315684 A0A1B0GU33 70 aa5.15□□□□□ -1.58
CTC1-201ENST00000315684 NOTCH2NLQ7Z3S9 236 aa5.15□□□□□ -1.58
CTC1-201ENST00000315684 ADM2Q7Z4H4 148 aa5.15□□□□□ -1.59
CTC1-201ENST00000315684 TENM1Q9UKZ4 2725 aa5.14□□□□□ -1.59
CTC1-201ENST00000315684 CDC42SE1Q9NRR8 79 aa5.14□□□□□ -1.59
CTC1-201ENST00000315684 PLAC4Q8WY50 150 aa5.13□□□□□ -1.59
CTC1-201ENST00000315684 OCR1Q9BZK8 76 aa5.13□□□□□ -1.59
CTC1-201ENST00000315684 PKD1L1Q8TDX9 2849 aa5.13□□□□□ -1.59
CTC1-201ENST00000315684 KRTAP4-16G5E9R7 235 aaPredicted RBP5.13□□□□□ -1.59
CTC1-201ENST00000315684 H7BZZ5 65 aa5.12□□□□□ -1.59
CTC1-201ENST00000315684 A0A1B0GVY2 172 aa5.12□□□□□ -1.59
CTC1-201ENST00000315684 C20orf166-AS1Q96NR2 134 aa5.12□□□□□ -1.59
CTC1-201ENST00000315684 KLKP1Q107X0 134 aa5.11□□□□□ -1.59
CTC1-201ENST00000315684 CUBNO60494 3623 aa5.1□□□□□ -1.59
CTC1-201ENST00000315684 RPS28P62857 69 aaKnown RBP5.08□□□□□ -1.6
CTC1-201ENST00000315684 SPANXA2-OT1Q8N9U9 137 aa5.07□□□□□ -1.6
CTC1-201ENST00000315684 BSNQ9UPA5 3926 aa5.07□□□□□ -1.6
CTC1-201ENST00000315684 MXRA5Q9NR99 2828 aa5.05□□□□□ -1.6
CTC1-201ENST00000315684 A0A0A0MQY5 61 aa5.04□□□□□ -1.6
CTC1-201ENST00000315684 PDZD2O15018 2839 aa5.04□□□□□ -1.6
CTC1-201ENST00000315684 VWFP04275 2813 aa5.03□□□□□ -1.6
CTC1-201ENST00000315684 RPL37P61927 97 aaKnown RBP5.03□□□□□ -1.6
CTC1-201ENST00000315684 H1FX-AS1Q4G0G2 97 aa5.03□□□□□ -1.6
CTC1-201ENST00000315684 SPATA8Q6RVD6 105 aa5.01□□□□□ -1.61
CTC1-201ENST00000315684 Q75L30 129 aa5□□□□□ -1.61
CTC1-201ENST00000315684 DMAC1Q96GE9 116 aa4.99□□□□□ -1.61
CTC1-201ENST00000315684 TENM3Q9P273 2699 aa4.99□□□□□ -1.61
CTC1-201ENST00000315684 KRTAP13-1Q8IUC0 172 aa4.98□□□□□ -1.61
CTC1-201ENST00000315684 ANK3Q12955 4377 aaKnown RBP4.98□□□□□ -1.61
CTC1-201ENST00000315684 A8MUU9 505 aa4.97□□□□□ -1.61
CTC1-201ENST00000315684 PRAC1Q96KF2 57 aa4.97□□□□□ -1.61
CTC1-201ENST00000315684 FBN1P35555 2871 aaKnown RBP4.96□□□□□ -1.62
CTC1-201ENST00000315684 OTOGQ6ZRI0 2925 aa4.96□□□□□ -1.62
CTC1-201ENST00000315684 RPS29P62273 56 aaKnown RBP4.96□□□□□ -1.62
CTC1-201ENST00000315684 Q1T7F1 81 aa4.94□□□□□ -1.62
CTC1-201ENST00000315684 XP32Q5T750 250 aa4.93□□□□□ -1.62
CTC1-201ENST00000315684 TRRAPQ9Y4A5 3859 aa4.93□□□□□ -1.62
CTC1-201ENST00000315684 KRTAP1-4P0C5Y4 121 aa4.92□□□□□ -1.62
CTC1-201ENST00000315684 CYSTM1Q9H1C7 97 aa4.91□□□□□ -1.62
CTC1-201ENST00000315684 KRTAP10-10P60014 251 aa4.89□□□□□ -1.63
CTC1-201ENST00000315684 ASB16-AS1Q495Z4 193 aa4.89□□□□□ -1.63
CTC1-201ENST00000315684 VPS13CQ709C8 3753 aa4.88□□□□□ -1.63
CTC1-201ENST00000315684 KRTAP29-1A8MX34 341 aaPredicted RBP4.86□□□□□ -1.63
CTC1-201ENST00000315684 TGP01266 2768 aa4.84□□□□□ -1.63
CTC1-201ENST00000315684 LINC01558Q9Y6Z2 57 aa4.83□□□□□ -1.64
CTC1-201ENST00000315684 A8MU10 97 aa4.83□□□□□ -1.64
CTC1-201ENST00000315684 KRTAP10-8P60410 259 aa4.82□□□□□ -1.64
CTC1-201ENST00000315684 Q5XG85 94 aa4.81□□□□□ -1.64
CTC1-201ENST00000315684 TPRXLQ17RH7 258 aa4.81□□□□□ -1.64
CTC1-201ENST00000315684 ROMO1P60602 79 aa4.76□□□□□ -1.65
CTC1-201ENST00000315684 Q5VV11 94 aa4.75□□□□□ -1.65
CTC1-201ENST00000315684 KRTAP13-3Q3SY46 172 aa4.75□□□□□ -1.65
CTC1-201ENST00000315684 ZNF469Q96JG9 3925 aaPredicted RBP4.74□□□□□ -1.65
CTC1-201ENST00000315684 KRTAP16-1A8MUX0 517 aa4.72□□□□□ -1.65
CTC1-201ENST00000315684 AKAP9Q99996 3911 aa4.71□□□□□ -1.66
CTC1-201ENST00000315684 KRTAP4-5Q9BYR2 181 aa4.7□□□□□ -1.66
CTC1-201ENST00000315684 COL7A1Q02388 2944 aa4.69□□□□□ -1.66
CTC1-201ENST00000315684 SRRM2Q9UQ35 2752 aaKnown RBP4.68□□□□□ -1.66
CTC1-201ENST00000315684 NDUFAF8A1L188 74 aa4.68□□□□□ -1.66
CTC1-201ENST00000315684 HUWE1Q7Z6Z7 4374 aaKnown RBP4.66□□□□□ -1.66
CTC1-201ENST00000315684 TNP1P09430 55 aa4.64□□□□□ -1.67
CTC1-201ENST00000315684 CSMD3Q7Z407 3707 aa4.61□□□□□ -1.67
CTC1-201ENST00000315684 PRO2289Q9P1D8 64 aa4.55□□□□□ -1.68
CTC1-201ENST00000315684 FBN3Q75N90 2809 aa4.53□□□□□ -1.68
CTC1-201ENST00000315684 P0C880 135 aa4.51□□□□□ -1.69
CTC1-201ENST00000315684 C10orf95Q9H7T3 257 aa4.51□□□□□ -1.69
CTC1-201ENST00000315684 MEGF8Q7Z7M0 2845 aa4.47□□□□□ -1.69
CTC1-201ENST00000315684 KRTAP25-1Q3LHN0 102 aa4.46□□□□□ -1.7
CTC1-201ENST00000315684 ALMS1Q8TCU4 4167 aa4.45□□□□□ -1.7
CTC1-201ENST00000315684 MT1HL1P0DM35 61 aa4.44□□□□□ -1.7
CTC1-201ENST00000315684 DNAH9Q9NYC9 4486 aa4.41□□□□□ -1.7
CTC1-201ENST00000315684 A6NN06 94 aa4.36□□□□□ -1.71
CTC1-201ENST00000315684 H0YAA0 97 aa4.36□□□□□ -1.71
CTC1-201ENST00000315684 KRTAP12-2P59991 146 aa4.25□□□□□ -1.73
CTC1-201ENST00000315684 KRTAP10-4P60372 401 aaPredicted RBP4.25□□□□□ -1.73
CTC1-201ENST00000315684 DNAH1Q9P2D7 4330 aa4.23□□□□□ -1.73
CTC1-201ENST00000315684 CRCT1Q9UGL9 99 aa4.22□□□□□ -1.73
CTC1-201ENST00000315684 KRTAP3-1Q9BYR8 98 aa4.22□□□□□ -1.73
CTC1-201ENST00000315684 DNHD1Q96M86 4753 aa4.21□□□□□ -1.73
CTC1-201ENST00000315684 PRKDCP78527 4128 aaKnown RBP4.21□□□□□ -1.74
CTC1-201ENST00000315684 PP632Q6XCG6 107 aa4.2□□□□□ -1.74
CTC1-201ENST00000315684 KMT2AQ03164 3969 aa4.19□□□□□ -1.74
CTC1-201ENST00000315684 PLECQ15149 4684 aaKnown RBP4.18□□□□□ -1.74
CTC1-201ENST00000315684 KRTAP3-3Q9BYR6 98 aa4.17□□□□□ -1.74
CTC1-201ENST00000315684 KRTAP3-2Q9BYR7 98 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms