RNA–Protein interactions for RNA: ENST00000314845.7

AMBRA1-201, Transcript of autophagy and beclin 1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AMBRA1, Length 5,023 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-201ENST00000314845 MYO15AQ9UKN7 3530 aa6.98□□□□□ -1.29
AMBRA1-201ENST00000314845 KRTAP29-1A8MX34 341 aaPredicted RBP6.98□□□□□ -1.29
AMBRA1-201ENST00000314845 KMT2BQ9UMN6 2715 aaPredicted RBP6.97□□□□□ -1.29
AMBRA1-201ENST00000314845 CFAP47Q6ZTR5 3102 aa6.96□□□□□ -1.29
AMBRA1-201ENST00000314845 RPL37P61927 97 aaKnown RBP6.95□□□□□ -1.3
AMBRA1-201ENST00000314845 NIPBLQ6KC79 2804 aaeCLIP6.95□□□□□ -1.3
AMBRA1-201ENST00000314845 MUC3AQ02505 3323 aa6.94□□□□□ -1.3
AMBRA1-201ENST00000314845 RPS29P62273 56 aaKnown RBP6.93□□□□□ -1.3
AMBRA1-201ENST00000314845 ZANQ9Y493 2812 aa6.92□□□□□ -1.3
AMBRA1-201ENST00000314845 M0QZ58 72 aa6.91□□□□□ -1.3
AMBRA1-201ENST00000314845 KRTAP11-1Q8IUC1 163 aa6.89□□□□□ -1.31
AMBRA1-201ENST00000314845 H1FX-AS1Q4G0G2 97 aa6.88□□□□□ -1.31
AMBRA1-201ENST00000314845 NOTCH2NLQ7Z3S9 236 aa6.86□□□□□ -1.31
AMBRA1-201ENST00000314845 KRTAP7-1Q8IUC3 87 aa6.85□□□□□ -1.31
AMBRA1-201ENST00000314845 CRYBG3Q68DQ2 2970 aa6.83□□□□□ -1.32
AMBRA1-201ENST00000314845 CELSR2Q9HCU4 2923 aa6.83□□□□□ -1.32
AMBRA1-201ENST00000314845 ROMO1P60602 79 aa6.83□□□□□ -1.32
AMBRA1-201ENST00000314845 ADM2Q7Z4H4 148 aa6.82□□□□□ -1.32
AMBRA1-201ENST00000314845 KRTAP13-1Q8IUC0 172 aa6.82□□□□□ -1.32
AMBRA1-201ENST00000314845 ASH1LQ9NR48 2969 aaKnown RBP6.81□□□□□ -1.32
AMBRA1-201ENST00000314845 HRNRQ86YZ3 2850 aaPredicted RBP6.81□□□□□ -1.32
AMBRA1-201ENST00000314845 KRTAP13-2Q52LG2 175 aa6.8□□□□□ -1.32
AMBRA1-201ENST00000314845 PLAC4Q8WY50 150 aa6.8□□□□□ -1.32
AMBRA1-201ENST00000314845 SPATA8Q6RVD6 105 aa6.75□□□□□ -1.33
AMBRA1-201ENST00000314845 DCHS1Q96JQ0 3298 aa6.74□□□□□ -1.33
AMBRA1-201ENST00000314845 NF1P21359 2839 aa6.74□□□□□ -1.33
AMBRA1-201ENST00000314845 RELNP78509 3460 aa6.73□□□□□ -1.33
AMBRA1-201ENST00000314845 LAMA5O15230 3695 aa6.72□□□□□ -1.33
AMBRA1-201ENST00000314845 A6NN06 94 aa6.72□□□□□ -1.33
AMBRA1-201ENST00000314845 DMDP11532 3685 aa6.72□□□□□ -1.33
AMBRA1-201ENST00000314845 DCHS2Q6V1P9 2916 aa6.72□□□□□ -1.33
AMBRA1-201ENST00000314845 TENM3Q9P273 2699 aa6.7□□□□□ -1.34
AMBRA1-201ENST00000314845 KRTAP16-1A8MUX0 517 aa6.7□□□□□ -1.34
AMBRA1-201ENST00000314845 FBN2P35556 2912 aa6.66□□□□□ -1.34
AMBRA1-201ENST00000314845 A8MUU9 505 aa6.66□□□□□ -1.34
AMBRA1-201ENST00000314845 ASPMQ8IZT6 3477 aa6.65□□□□□ -1.34
AMBRA1-201ENST00000314845 C20orf166-AS1Q96NR2 134 aa6.63□□□□□ -1.35
AMBRA1-201ENST00000314845 WDFY3Q8IZQ1 3526 aa6.62□□□□□ -1.35
AMBRA1-201ENST00000314845 KRTAP25-1Q3LHN0 102 aa6.62□□□□□ -1.35
AMBRA1-201ENST00000314845 MXRA5Q9NR99 2828 aa6.6□□□□□ -1.35
AMBRA1-201ENST00000314845 TENM1Q9UKZ4 2725 aa6.57□□□□□ -1.36
AMBRA1-201ENST00000314845 A8MU10 97 aa6.55□□□□□ -1.36
AMBRA1-201ENST00000314845 KRTAP1-4P0C5Y4 121 aa6.5□□□□□ -1.37
AMBRA1-201ENST00000314845 PDZD2O15018 2839 aa6.47□□□□□ -1.37
AMBRA1-201ENST00000314845 ZFHX4Q86UP3 3567 aa6.46□□□□□ -1.38
AMBRA1-201ENST00000314845 NDUFAF8A1L188 74 aa6.45□□□□□ -1.38
AMBRA1-201ENST00000314845 XP32Q5T750 250 aa6.44□□□□□ -1.38
AMBRA1-201ENST00000314845 TENM2Q9NT68 2774 aa6.43□□□□□ -1.38
AMBRA1-201ENST00000314845 SMG1Q96Q15 3661 aaKnown RBP6.43□□□□□ -1.38
AMBRA1-201ENST00000314845 TNP1P09430 55 aa6.43□□□□□ -1.38
AMBRA1-201ENST00000314845 OTOGQ6ZRI0 2925 aa6.4□□□□□ -1.39
AMBRA1-201ENST00000314845 TPRXLQ17RH7 258 aa6.38□□□□□ -1.39
AMBRA1-201ENST00000314845 PKD1L1Q8TDX9 2849 aa6.35□□□□□ -1.39
AMBRA1-201ENST00000314845 CELSR1Q9NYQ6 3014 aa6.34□□□□□ -1.39
AMBRA1-201ENST00000314845 NBPF19A0A087WUL8 3843 aa6.32□□□□□ -1.4
AMBRA1-201ENST00000314845 ZFHX3Q15911 3703 aa6.28□□□□□ -1.4
AMBRA1-201ENST00000314845 FBN1P35555 2871 aaKnown RBP6.27□□□□□ -1.41
AMBRA1-201ENST00000314845 KRTAP10-8P60410 259 aa6.25□□□□□ -1.41
AMBRA1-201ENST00000314845 PP632Q6XCG6 107 aa6.25□□□□□ -1.41
AMBRA1-201ENST00000314845 KRTAP13-3Q3SY46 172 aa6.25□□□□□ -1.41
AMBRA1-201ENST00000314845 VWFP04275 2813 aa6.23□□□□□ -1.41
AMBRA1-201ENST00000314845 A0A1B0GVY2 172 aa6.23□□□□□ -1.41
AMBRA1-201ENST00000314845 TGP01266 2768 aa6.2□□□□□ -1.42
AMBRA1-201ENST00000314845 SPENQ96T58 3664 aaKnown RBP6.19□□□□□ -1.42
AMBRA1-201ENST00000314845 CSMD1Q96PZ7 3565 aa6.19□□□□□ -1.42
AMBRA1-201ENST00000314845 KRTAP10-10P60014 251 aa6.18□□□□□ -1.42
AMBRA1-201ENST00000314845 C10orf95Q9H7T3 257 aa6.17□□□□□ -1.42
AMBRA1-201ENST00000314845 CSMD2Q7Z408 3487 aa6.16□□□□□ -1.42
AMBRA1-201ENST00000314845 H0YAA0 97 aa6.14□□□□□ -1.43
AMBRA1-201ENST00000314845 SVEP1Q4LDE5 3571 aa6.13□□□□□ -1.43
AMBRA1-201ENST00000314845 BSNQ9UPA5 3926 aa6.13□□□□□ -1.43
AMBRA1-201ENST00000314845 PRO2289Q9P1D8 64 aa6.1□□□□□ -1.43
AMBRA1-201ENST00000314845 P0C880 135 aa6.08□□□□□ -1.44
AMBRA1-201ENST00000314845 SRRM2Q9UQ35 2752 aaKnown RBP6.06□□□□□ -1.44
AMBRA1-201ENST00000314845 ANK3Q12955 4377 aaKnown RBP6.02□□□□□ -1.45
AMBRA1-201ENST00000314845 CUBNO60494 3623 aa5.95□□□□□ -1.46
AMBRA1-201ENST00000314845 TRRAPQ9Y4A5 3859 aa5.93□□□□□ -1.46
AMBRA1-201ENST00000314845 FBN3Q75N90 2809 aa5.83□□□□□ -1.48
AMBRA1-201ENST00000314845 KRTAP12-2P59991 146 aa5.77□□□□□ -1.49
AMBRA1-201ENST00000314845 KRTAP13-4Q3LI77 160 aa5.75□□□□□ -1.49
AMBRA1-201ENST00000314845 KRTAP3-1Q9BYR8 98 aa5.74□□□□□ -1.49
AMBRA1-201ENST00000314845 COL7A1Q02388 2944 aa5.73□□□□□ -1.49
AMBRA1-201ENST00000314845 KRTAP12-1P59990 96 aa5.73□□□□□ -1.49
AMBRA1-201ENST00000314845 ZNF469Q96JG9 3925 aaPredicted RBP5.72□□□□□ -1.49
AMBRA1-201ENST00000314845 MEGF8Q7Z7M0 2845 aa5.71□□□□□ -1.49
AMBRA1-201ENST00000314845 VPS13CQ709C8 3753 aa5.71□□□□□ -1.5
AMBRA1-201ENST00000314845 MT1HL1P0DM35 61 aa5.64□□□□□ -1.51
AMBRA1-201ENST00000314845 AKAP9Q99996 3911 aa5.62□□□□□ -1.51
AMBRA1-201ENST00000314845 KRTAP10-6P60371 365 aaPredicted RBP5.58□□□□□ -1.52
AMBRA1-201ENST00000314845 HUWE1Q7Z6Z7 4374 aaKnown RBP5.51□□□□□ -1.53
AMBRA1-201ENST00000314845 KRTAP15-1Q3LI76 137 aa5.49□□□□□ -1.53
AMBRA1-201ENST00000314845 KRTAP10-4P60372 401 aaPredicted RBP5.47□□□□□ -1.53
AMBRA1-201ENST00000314845 KRTAP4-5Q9BYR2 181 aa5.4□□□□□ -1.54
AMBRA1-201ENST00000314845 DNHD1Q96M86 4753 aa5.4□□□□□ -1.55
AMBRA1-201ENST00000314845 DNAH9Q9NYC9 4486 aa5.38□□□□□ -1.55
AMBRA1-201ENST00000314845 KRTAP3-3Q9BYR6 98 aa5.38□□□□□ -1.55
AMBRA1-201ENST00000314845 KRTAP3-2Q9BYR7 98 aa5.38□□□□□ -1.55
AMBRA1-201ENST00000314845 INE1O15225 51 aa5.37□□□□□ -1.55
AMBRA1-201ENST00000314845 KRTAP10-12P60413 245 aa5.32□□□□□ -1.56
AMBRA1-201ENST00000314845 CSMD3Q7Z407 3707 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms