RNA–Protein interactions for RNA: ENST00000314358.9

KDM3B-201, Transcript of lysine demethylase 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3B, Length 6,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-201ENST00000314358 CRYBG3Q68DQ2 2970 aa11.21□□□□□ -0.61
KDM3B-201ENST00000314358 UBR5O95071 2799 aaPredicted RBP11.21□□□□□ -0.61
KDM3B-201ENST00000314358 CFAP47Q6ZTR5 3102 aa11.19□□□□□ -0.62
KDM3B-201ENST00000314358 ASH1LQ9NR48 2969 aaKnown RBP11.18□□□□□ -0.62
KDM3B-201ENST00000314358 APCP25054 2843 aa11.16□□□□□ -0.62
KDM3B-201ENST00000314358 H0YAA0 97 aa11.11□□□□□ -0.63
KDM3B-201ENST00000314358 KMT2BQ9UMN6 2715 aaPredicted RBP11.1□□□□□ -0.63
KDM3B-201ENST00000314358 ITPR1Q14643 2758 aa11.09□□□□□ -0.63
KDM3B-201ENST00000314358 XP32Q5T750 250 aa11.09□□□□□ -0.63
KDM3B-201ENST00000314358 VCANP13611 3396 aa11.03□□□□□ -0.64
KDM3B-201ENST00000314358 KRTAP10-10P60014 251 aa11.03□□□□□ -0.64
KDM3B-201ENST00000314358 TACC2O95359 2948 aa11.03□□□□□ -0.64
KDM3B-201ENST00000314358 SPTBN5Q9NRC6 3674 aaKnown RBP11.02□□□□□ -0.64
KDM3B-201ENST00000314358 PP632Q6XCG6 107 aa11.01□□□□□ -0.65
KDM3B-201ENST00000314358 P0C880 135 aa11.01□□□□□ -0.65
KDM3B-201ENST00000314358 HIVEP1P15822 2718 aa11.01□□□□□ -0.65
KDM3B-201ENST00000314358 LRBAP50851 2863 aa10.98□□□□□ -0.65
KDM3B-201ENST00000314358 ATMQ13315 3056 aa10.97□□□□□ -0.65
KDM3B-201ENST00000314358 UTP20O75691 2785 aaKnown RBP10.94□□□□□ -0.66
KDM3B-201ENST00000314358 FLNCQ14315 2725 aa10.93□□□□□ -0.66
KDM3B-201ENST00000314358 SPEGQ15772 3267 aa10.9□□□□□ -0.66
KDM3B-201ENST00000314358 LAMA1P25391 3075 aa10.9□□□□□ -0.66
KDM3B-201ENST00000314358 KRTAP1-4P0C5Y4 121 aa10.89□□□□□ -0.67
KDM3B-201ENST00000314358 COL12A1Q99715 3063 aa10.86□□□□□ -0.67
KDM3B-201ENST00000314358 BOD1L1Q8NFC6 3051 aa10.82□□□□□ -0.68
KDM3B-201ENST00000314358 FRYLO94915 3013 aa10.78□□□□□ -0.68
KDM3B-201ENST00000314358 EYSQ5T1H1 3165 aa10.77□□□□□ -0.68
KDM3B-201ENST00000314358 NBEAQ8NFP9 2946 aa10.75□□□□□ -0.69
KDM3B-201ENST00000314358 USP34Q70CQ2 3546 aa10.74□□□□□ -0.69
KDM3B-201ENST00000314358 PRO2289Q9P1D8 64 aa10.72□□□□□ -0.69
KDM3B-201ENST00000314358 TNRC18O15417 2968 aaPredicted RBP10.71□□□□□ -0.69
KDM3B-201ENST00000314358 ADGRG4Q8IZF6 3080 aa10.71□□□□□ -0.7
KDM3B-201ENST00000314358 TENM4Q6N022 2769 aa10.66□□□□□ -0.7
KDM3B-201ENST00000314358 TPRXLQ17RH7 258 aa10.63□□□□□ -0.71
KDM3B-201ENST00000314358 CELSR2Q9HCU4 2923 aa10.62□□□□□ -0.71
KDM3B-201ENST00000314358 ZZEF1O43149 2961 aa10.6□□□□□ -0.71
KDM3B-201ENST00000314358 KRTAP12-2P59991 146 aa10.54□□□□□ -0.72
KDM3B-201ENST00000314358 NIPBLQ6KC79 2804 aaeCLIP10.54□□□□□ -0.725e-6■■■■■ 32.2
KDM3B-201ENST00000314358 KRTAP13-3Q3SY46 172 aa10.54□□□□□ -0.72
KDM3B-201ENST00000314358 DCHS2Q6V1P9 2916 aa10.42□□□□□ -0.74
KDM3B-201ENST00000314358 MYO15AQ9UKN7 3530 aa10.41□□□□□ -0.74
KDM3B-201ENST00000314358 HRNRQ86YZ3 2850 aaPredicted RBP10.39□□□□□ -0.75
KDM3B-201ENST00000314358 DMXL1Q9Y485 3027 aa10.37□□□□□ -0.75
KDM3B-201ENST00000314358 ASPMQ8IZT6 3477 aa10.37□□□□□ -0.75
KDM3B-201ENST00000314358 ZANQ9Y493 2812 aa10.31□□□□□ -0.76
KDM3B-201ENST00000314358 TENM1Q9UKZ4 2725 aa10.29□□□□□ -0.76
KDM3B-201ENST00000314358 TGP01266 2768 aa10.27□□□□□ -0.76
KDM3B-201ENST00000314358 KRTAP13-4Q3LI77 160 aa10.19□□□□□ -0.78
KDM3B-201ENST00000314358 TENM2Q9NT68 2774 aa10.17□□□□□ -0.78
KDM3B-201ENST00000314358 NBPF19A0A087WUL8 3843 aa10.16□□□□□ -0.78
KDM3B-201ENST00000314358 LOC400499M0QZD8 3231 aa10.16□□□□□ -0.78
KDM3B-201ENST00000314358 KRTAP12-1P59990 96 aa10.16□□□□□ -0.78
KDM3B-201ENST00000314358 NF1P21359 2839 aa10.15□□□□□ -0.79
KDM3B-201ENST00000314358 CELSR1Q9NYQ6 3014 aa10.14□□□□□ -0.79
KDM3B-201ENST00000314358 KRTAP15-1Q3LI76 137 aa10.14□□□□□ -0.79
KDM3B-201ENST00000314358 WDFY3Q8IZQ1 3526 aa10.12□□□□□ -0.79
KDM3B-201ENST00000314358 DCHS1Q96JQ0 3298 aa10.09□□□□□ -0.79
KDM3B-201ENST00000314358 FBN2P35556 2912 aa10.08□□□□□ -0.8
KDM3B-201ENST00000314358 TENM3Q9P273 2699 aa10.07□□□□□ -0.8
KDM3B-201ENST00000314358 ZFHX4Q86UP3 3567 aa10.01□□□□□ -0.81
KDM3B-201ENST00000314358 CRCT1Q9UGL9 99 aa10□□□□□ -0.81
KDM3B-201ENST00000314358 RELNP78509 3460 aa9.99□□□□□ -0.81
KDM3B-201ENST00000314358 KRTAP3-1Q9BYR8 98 aa9.91□□□□□ -0.82
KDM3B-201ENST00000314358 MXRA5Q9NR99 2828 aa9.9□□□□□ -0.82
KDM3B-201ENST00000314358 PKD1L1Q8TDX9 2849 aa9.89□□□□□ -0.83
KDM3B-201ENST00000314358 PDZD2O15018 2839 aa9.89□□□□□ -0.83
KDM3B-201ENST00000314358 VWFP04275 2813 aa9.88□□□□□ -0.83
KDM3B-201ENST00000314358 CSMD1Q96PZ7 3565 aa9.84□□□□□ -0.83
KDM3B-201ENST00000314358 LAMA5O15230 3695 aa9.76□□□□□ -0.85
KDM3B-201ENST00000314358 ANK3Q12955 4377 aaKnown RBP9.69□□□□□ -0.86
KDM3B-201ENST00000314358 KRTAP10-6P60371 365 aaPredicted RBP9.63□□□□□ -0.87
KDM3B-201ENST00000314358 DMDP11532 3685 aa9.63□□□□□ -0.87
KDM3B-201ENST00000314358 OTOGQ6ZRI0 2925 aa9.53□□□□□ -0.88
KDM3B-201ENST00000314358 SMG1Q96Q15 3661 aaKnown RBP9.52□□□□□ -0.88
KDM3B-201ENST00000314358 KRTAP10-12P60413 245 aa9.44□□□□□ -0.9
KDM3B-201ENST00000314358 KRTAP4-5Q9BYR2 181 aa9.42□□□□□ -0.9
KDM3B-201ENST00000314358 MT1HL1P0DM35 61 aa9.4□□□□□ -0.9
KDM3B-201ENST00000314358 ZFHX3Q15911 3703 aa9.4□□□□□ -0.9
KDM3B-201ENST00000314358 INE1O15225 51 aa9.36□□□□□ -0.91
KDM3B-201ENST00000314358 CUBNO60494 3623 aa9.36□□□□□ -0.91
KDM3B-201ENST00000314358 SVEP1Q4LDE5 3571 aa9.34□□□□□ -0.91
KDM3B-201ENST00000314358 FBN1P35555 2871 aaKnown RBP9.34□□□□□ -0.91
KDM3B-201ENST00000314358 SPENQ96T58 3664 aaKnown RBP9.32□□□□□ -0.92
KDM3B-201ENST00000314358 HUWE1Q7Z6Z7 4374 aaKnown RBP9.29□□□□□ -0.92
KDM3B-201ENST00000314358 SRRM2Q9UQ35 2752 aaKnown RBP9.29□□□□□ -0.92
KDM3B-201ENST00000314358 CSMD2Q7Z408 3487 aa9.29□□□□□ -0.92
KDM3B-201ENST00000314358 MEGF8Q7Z7M0 2845 aa9.23□□□□□ -0.93
KDM3B-201ENST00000314358 KRTAP3-2Q9BYR7 98 aa9.21□□□□□ -0.94
KDM3B-201ENST00000314358 KRTAP3-3Q9BYR6 98 aa9.2□□□□□ -0.94
KDM3B-201ENST00000314358 FBN3Q75N90 2809 aa9.19□□□□□ -0.94
KDM3B-201ENST00000314358 ALMS1Q8TCU4 4167 aa9.17□□□□□ -0.94
KDM3B-201ENST00000314358 LCE3AQ5TA76 89 aa9.16□□□□□ -0.94
KDM3B-201ENST00000314358 KRTAP12-3P60328 96 aa9.16□□□□□ -0.94
KDM3B-201ENST00000314358 KRTAP10-4P60372 401 aaPredicted RBP9.15□□□□□ -0.94
KDM3B-201ENST00000314358 COL7A1Q02388 2944 aa9.1□□□□□ -0.95
KDM3B-201ENST00000314358 TRRAPQ9Y4A5 3859 aa9.08□□□□□ -0.96
KDM3B-201ENST00000314358 KRTAP10-5P60370 271 aa9.07□□□□□ -0.96
KDM3B-201ENST00000314358 BSNQ9UPA5 3926 aa9.06□□□□□ -0.96
KDM3B-201ENST00000314358 LORP23490 312 aaPredicted RBP8.96□□□□□ -0.98
KDM3B-201ENST00000314358 VPS13CQ709C8 3753 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms