RNA–Protein interactions for RNA: ENST00000313654.13

LAMA3-202, Transcript of laminin subunit alpha 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LAMA3, Length 10,661 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-202ENST00000313654 PRUNE2Q8WUY3 3088 aa7.03□□□□□ -1.28
LAMA3-202ENST00000313654 DMXL2Q8TDJ6 3036 aa6.95□□□□□ -1.3
LAMA3-202ENST00000313654 TACC2O95359 2948 aa6.94□□□□□ -1.3
LAMA3-202ENST00000313654 TNRC18O15417 2968 aaPredicted RBP6.94□□□□□ -1.3
LAMA3-202ENST00000313654 Q6ZRN7 208 aaPredicted RBP6.94□□□□□ -1.3
LAMA3-202ENST00000313654 VWFP04275 2813 aa6.93□□□□□ -1.3
LAMA3-202ENST00000313654 KRTAP13-2Q52LG2 175 aa6.89□□□□□ -1.31
LAMA3-202ENST00000313654 PRO2289Q9P1D8 64 aa6.86□□□□□ -1.31
LAMA3-202ENST00000313654 XIRP2A4UGR9 3374 aa6.84□□□□□ -1.31
LAMA3-202ENST00000313654 WDFY4Q6ZS81 3184 aa6.83□□□□□ -1.32
LAMA3-202ENST00000313654 A0A1B0GVY2 172 aa6.82□□□□□ -1.32
LAMA3-202ENST00000313654 VPS13AQ96RL7 3174 aa6.82□□□□□ -1.32
LAMA3-202ENST00000313654 ZZEF1O43149 2961 aa6.82□□□□□ -1.32
LAMA3-202ENST00000313654 NBEAQ8NFP9 2946 aa6.81□□□□□ -1.32
LAMA3-202ENST00000313654 DCHS2Q6V1P9 2916 aa6.78□□□□□ -1.32
LAMA3-202ENST00000313654 PKD1L1Q8TDX9 2849 aa6.75□□□□□ -1.33
LAMA3-202ENST00000313654 RANBP2P49792 3224 aaKnown RBP6.74□□□□□ -1.33
LAMA3-202ENST00000313654 TENM2Q9NT68 2774 aa6.74□□□□□ -1.33
LAMA3-202ENST00000313654 CELSR1Q9NYQ6 3014 aa6.73□□□□□ -1.33
LAMA3-202ENST00000313654 LAMA1P25391 3075 aa6.73□□□□□ -1.33
LAMA3-202ENST00000313654 MKI67P46013 3256 aaKnown RBP6.73□□□□□ -1.33
LAMA3-202ENST00000313654 ZANQ9Y493 2812 aa6.72□□□□□ -1.33
LAMA3-202ENST00000313654 KRTAP13-1Q8IUC0 172 aa6.72□□□□□ -1.33
LAMA3-202ENST00000313654 KRTAP12-2P59991 146 aa6.7□□□□□ -1.34
LAMA3-202ENST00000313654 KRTAP7-1Q8IUC3 87 aa6.69□□□□□ -1.34
LAMA3-202ENST00000313654 KRTAP10-10P60014 251 aa6.69□□□□□ -1.34
LAMA3-202ENST00000313654 DMXL1Q9Y485 3027 aa6.66□□□□□ -1.34
LAMA3-202ENST00000313654 TENM4Q6N022 2769 aa6.63□□□□□ -1.35
LAMA3-202ENST00000313654 BOD1L1Q8NFC6 3051 aa6.63□□□□□ -1.35
LAMA3-202ENST00000313654 REV3LO60673 3130 aa6.63□□□□□ -1.35
LAMA3-202ENST00000313654 XP32Q5T750 250 aa6.62□□□□□ -1.35
LAMA3-202ENST00000313654 BRCA2P51587 3418 aa6.62□□□□□ -1.35
LAMA3-202ENST00000313654 ATMQ13315 3056 aa6.61□□□□□ -1.35
LAMA3-202ENST00000313654 CELSR3Q9NYQ7 3312 aa6.6□□□□□ -1.35
LAMA3-202ENST00000313654 FBN2P35556 2912 aa6.6□□□□□ -1.35
LAMA3-202ENST00000313654 HTTP42858 3142 aa6.58□□□□□ -1.36
LAMA3-202ENST00000313654 MXRA5Q9NR99 2828 aa6.57□□□□□ -1.36
LAMA3-202ENST00000313654 LAMA3Q16787 3333 aa6.54□□□□□ -1.36
LAMA3-202ENST00000313654 ADGRG4Q8IZF6 3080 aa6.53□□□□□ -1.36
LAMA3-202ENST00000313654 COL7A1Q02388 2944 aa6.53□□□□□ -1.36
LAMA3-202ENST00000313654 KRTAP13-4Q3LI77 160 aa6.51□□□□□ -1.37
LAMA3-202ENST00000313654 CDH23Q9H251 3354 aa6.5□□□□□ -1.37
LAMA3-202ENST00000313654 INE1O15225 51 aa6.5□□□□□ -1.37
LAMA3-202ENST00000313654 DNAH14Q0VDD8 3507 aa6.49□□□□□ -1.37
LAMA3-202ENST00000313654 KRTAP15-1Q3LI76 137 aa6.49□□□□□ -1.37
LAMA3-202ENST00000313654 SZT2Q5T011 3432 aa6.47□□□□□ -1.37
LAMA3-202ENST00000313654 COL6A3P12111 3177 aa6.45□□□□□ -1.38
LAMA3-202ENST00000313654 ZFHX3Q15911 3703 aa6.45□□□□□ -1.38
LAMA3-202ENST00000313654 TPRXLQ17RH7 258 aa6.45□□□□□ -1.38
LAMA3-202ENST00000313654 MEGF8Q7Z7M0 2845 aa6.39□□□□□ -1.39
LAMA3-202ENST00000313654 UNC80Q8N2C7 3258 aa6.36□□□□□ -1.39
LAMA3-202ENST00000313654 SPTBN5Q9NRC6 3674 aaKnown RBP6.31□□□□□ -1.4
LAMA3-202ENST00000313654 KRTAP12-1P59990 96 aa6.3□□□□□ -1.4
LAMA3-202ENST00000313654 KRTAP1-4P0C5Y4 121 aa6.3□□□□□ -1.4
LAMA3-202ENST00000313654 HRNRQ86YZ3 2850 aaPredicted RBP6.29□□□□□ -1.4
LAMA3-202ENST00000313654 USP34Q70CQ2 3546 aa6.28□□□□□ -1.4
LAMA3-202ENST00000313654 CFAP47Q6ZTR5 3102 aa6.26□□□□□ -1.41
LAMA3-202ENST00000313654 OTOGQ6ZRI0 2925 aa6.26□□□□□ -1.41
LAMA3-202ENST00000313654 SPEGQ15772 3267 aa6.24□□□□□ -1.41
LAMA3-202ENST00000313654 VCANP13611 3396 aa6.24□□□□□ -1.41
LAMA3-202ENST00000313654 KRTAP13-3Q3SY46 172 aa6.23□□□□□ -1.41
LAMA3-202ENST00000313654 ZFHX4Q86UP3 3567 aa6.19□□□□□ -1.42
LAMA3-202ENST00000313654 CRCT1Q9UGL9 99 aa6.16□□□□□ -1.42
LAMA3-202ENST00000313654 EYSQ5T1H1 3165 aa6.12□□□□□ -1.43
LAMA3-202ENST00000313654 FBN3Q75N90 2809 aa6.11□□□□□ -1.43
LAMA3-202ENST00000313654 MYO15AQ9UKN7 3530 aa6.06□□□□□ -1.44
LAMA3-202ENST00000313654 NBPF19A0A087WUL8 3843 aa6.04□□□□□ -1.44
LAMA3-202ENST00000313654 WDFY3Q8IZQ1 3526 aa6.03□□□□□ -1.44
LAMA3-202ENST00000313654 ASPMQ8IZT6 3477 aa5.95□□□□□ -1.46
LAMA3-202ENST00000313654 SMG1Q96Q15 3661 aaKnown RBP5.95□□□□□ -1.46
LAMA3-202ENST00000313654 KRTAP10-12P60413 245 aa5.93□□□□□ -1.46
LAMA3-202ENST00000313654 DMDP11532 3685 aa5.9□□□□□ -1.46
LAMA3-202ENST00000313654 FBN1P35555 2871 aaKnown RBP5.9□□□□□ -1.46
LAMA3-202ENST00000313654 KRTAP10-6P60371 365 aaPredicted RBP5.81□□□□□ -1.48
LAMA3-202ENST00000313654 KRTAP3-1Q9BYR8 98 aa5.8□□□□□ -1.48
LAMA3-202ENST00000313654 LOC400499M0QZD8 3231 aa5.79□□□□□ -1.48
LAMA3-202ENST00000313654 KRTAP10-5P60370 271 aa5.79□□□□□ -1.48
LAMA3-202ENST00000313654 SPENQ96T58 3664 aaKnown RBP5.79□□□□□ -1.48
LAMA3-202ENST00000313654 KRTAP23-1A1A580 65 aa5.77□□□□□ -1.49
LAMA3-202ENST00000313654 LAMA5O15230 3695 aa5.75□□□□□ -1.49
LAMA3-202ENST00000313654 KRTAP12-3P60328 96 aa5.74□□□□□ -1.49
LAMA3-202ENST00000313654 DCHS1Q96JQ0 3298 aa5.72□□□□□ -1.49
LAMA3-202ENST00000313654 VPS13CQ709C8 3753 aa5.62□□□□□ -1.51
LAMA3-202ENST00000313654 AKAP9Q99996 3911 aa5.6□□□□□ -1.51
LAMA3-202ENST00000313654 RELNP78509 3460 aa5.58□□□□□ -1.52
LAMA3-202ENST00000313654 CSMD1Q96PZ7 3565 aa5.58□□□□□ -1.52
LAMA3-202ENST00000313654 LCE3AQ5TA76 89 aa5.57□□□□□ -1.52
LAMA3-202ENST00000313654 KRTAP21-3Q3LHN1 58 aa5.56□□□□□ -1.52
LAMA3-202ENST00000313654 ALMS1Q8TCU4 4167 aa5.5□□□□□ -1.53
LAMA3-202ENST00000313654 KRTAP3-2Q9BYR7 98 aa5.49□□□□□ -1.53
LAMA3-202ENST00000313654 TRRAPQ9Y4A5 3859 aa5.48□□□□□ -1.53
LAMA3-202ENST00000313654 CSMD3Q7Z407 3707 aa5.47□□□□□ -1.53
LAMA3-202ENST00000313654 KRTAP3-3Q9BYR6 98 aa5.41□□□□□ -1.54
LAMA3-202ENST00000313654 CUBNO60494 3623 aa5.37□□□□□ -1.55
LAMA3-202ENST00000313654 KRTAP8-1Q8IUC2 63 aa5.31□□□□□ -1.56
LAMA3-202ENST00000313654 LYSTQ99698 3801 aa5.31□□□□□ -1.56
LAMA3-202ENST00000313654 BSNQ9UPA5 3926 aa5.31□□□□□ -1.56
LAMA3-202ENST00000313654 SVEP1Q4LDE5 3571 aa5.29□□□□□ -1.56
LAMA3-202ENST00000313654 KRTAP10-7P60409 375 aaPredicted RBP5.26□□□□□ -1.57
LAMA3-202ENST00000313654 MUC3AQ02505 3323 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms