RNA–Protein interactions for RNA: ENST00000313431.13

PDE4DIP-201, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 1 (best) BASIC

Gene PDE4DIP, Length 5,676 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-201ENST00000313431 NIPBLQ6KC79 2804 aaeCLIP9.43□□□□□ -0.9
PDE4DIP-201ENST00000313431 CELSR2Q9HCU4 2923 aa9.42□□□□□ -0.9
PDE4DIP-201ENST00000313431 KRTAP29-1A8MX34 341 aaPredicted RBP9.41□□□□□ -0.9
PDE4DIP-201ENST00000313431 LUZP6Q538Z0 58 aa9.41□□□□□ -0.9
PDE4DIP-201ENST00000313431 TENM4Q6N022 2769 aa9.41□□□□□ -0.9
PDE4DIP-201ENST00000313431 LCA10Q71F78 164 aa9.41□□□□□ -0.9
PDE4DIP-201ENST00000313431 M0QZ58 72 aa9.38□□□□□ -0.91
PDE4DIP-201ENST00000313431 CRYBG3Q68DQ2 2970 aa9.34□□□□□ -0.91
PDE4DIP-201ENST00000313431 DMAC1Q96GE9 116 aa9.33□□□□□ -0.92
PDE4DIP-201ENST00000313431 DCHS2Q6V1P9 2916 aa9.33□□□□□ -0.92
PDE4DIP-201ENST00000313431 Q5VV11 94 aa9.32□□□□□ -0.92
PDE4DIP-201ENST00000313431 NOTCH2NLQ7Z3S9 236 aa9.32□□□□□ -0.92
PDE4DIP-201ENST00000313431 KRTAP13-1Q8IUC0 172 aa9.28□□□□□ -0.92
PDE4DIP-201ENST00000313431 FBN2P35556 2912 aa9.24□□□□□ -0.93
PDE4DIP-201ENST00000313431 ASB16-AS1Q495Z4 193 aa9.24□□□□□ -0.93
PDE4DIP-201ENST00000313431 ADM2Q7Z4H4 148 aa9.22□□□□□ -0.93
PDE4DIP-201ENST00000313431 NF1P21359 2839 aa9.22□□□□□ -0.93
PDE4DIP-201ENST00000313431 KRTAP13-2Q52LG2 175 aa9.2□□□□□ -0.94
PDE4DIP-201ENST00000313431 RELNP78509 3460 aa9.17□□□□□ -0.94
PDE4DIP-201ENST00000313431 RPS29P62273 56 aaKnown RBP9.16□□□□□ -0.94
PDE4DIP-201ENST00000313431 C20orf166-AS1Q96NR2 134 aa9.15□□□□□ -0.94
PDE4DIP-201ENST00000313431 H1FX-AS1Q4G0G2 97 aa9.1□□□□□ -0.95
PDE4DIP-201ENST00000313431 WDFY3Q8IZQ1 3526 aa9.09□□□□□ -0.95
PDE4DIP-201ENST00000313431 RPL37P61927 97 aaKnown RBP9.07□□□□□ -0.96
PDE4DIP-201ENST00000313431 PRAC1Q96KF2 57 aa9.06□□□□□ -0.96
PDE4DIP-201ENST00000313431 MXRA5Q9NR99 2828 aa9.04□□□□□ -0.96
PDE4DIP-201ENST00000313431 LAMA5O15230 3695 aa9.03□□□□□ -0.96
PDE4DIP-201ENST00000313431 DCHS1Q96JQ0 3298 aa8.97□□□□□ -0.97
PDE4DIP-201ENST00000313431 A8MUU9 505 aa8.97□□□□□ -0.97
PDE4DIP-201ENST00000313431 SPATA8Q6RVD6 105 aa8.96□□□□□ -0.97
PDE4DIP-201ENST00000313431 ZFHX4Q86UP3 3567 aa8.96□□□□□ -0.97
PDE4DIP-201ENST00000313431 ASPMQ8IZT6 3477 aa8.96□□□□□ -0.98
PDE4DIP-201ENST00000313431 DMDP11532 3685 aa8.94□□□□□ -0.98
PDE4DIP-201ENST00000313431 MUC3AQ02505 3323 aa8.91□□□□□ -0.98
PDE4DIP-201ENST00000313431 CELSR1Q9NYQ6 3014 aa8.9□□□□□ -0.98
PDE4DIP-201ENST00000313431 ROMO1P60602 79 aa8.87□□□□□ -0.99
PDE4DIP-201ENST00000313431 KRTAP1-4P0C5Y4 121 aa8.85□□□□□ -0.99
PDE4DIP-201ENST00000313431 TENM3Q9P273 2699 aa8.81□□□□□ -1
PDE4DIP-201ENST00000313431 A0A1B0GVY2 172 aa8.81□□□□□ -1
PDE4DIP-201ENST00000313431 PDZD2O15018 2839 aa8.8□□□□□ -1
PDE4DIP-201ENST00000313431 TENM1Q9UKZ4 2725 aa8.74□□□□□ -1.01
PDE4DIP-201ENST00000313431 A8MU10 97 aa8.73□□□□□ -1.01
PDE4DIP-201ENST00000313431 TENM2Q9NT68 2774 aa8.72□□□□□ -1.01
PDE4DIP-201ENST00000313431 SMG1Q96Q15 3661 aaKnown RBP8.68□□□□□ -1.02
PDE4DIP-201ENST00000313431 NBPF19A0A087WUL8 3843 aa8.68□□□□□ -1.02
PDE4DIP-201ENST00000313431 XP32Q5T750 250 aa8.67□□□□□ -1.02
PDE4DIP-201ENST00000313431 A0A0A0MQY5 61 aa8.66□□□□□ -1.02
PDE4DIP-201ENST00000313431 CSMD1Q96PZ7 3565 aa8.66□□□□□ -1.02
PDE4DIP-201ENST00000313431 KRTAP10-10P60014 251 aa8.65□□□□□ -1.02
PDE4DIP-201ENST00000313431 KRTAP10-8P60410 259 aa8.65□□□□□ -1.02
PDE4DIP-201ENST00000313431 A6NN06 94 aa8.64□□□□□ -1.03
PDE4DIP-201ENST00000313431 H3BS24 57 aa8.63□□□□□ -1.03
PDE4DIP-201ENST00000313431 OTOGQ6ZRI0 2925 aa8.61□□□□□ -1.03
PDE4DIP-201ENST00000313431 TNP1P09430 55 aa8.6□□□□□ -1.03
PDE4DIP-201ENST00000313431 TPRXLQ17RH7 258 aa8.58□□□□□ -1.04
PDE4DIP-201ENST00000313431 PKD1L1Q8TDX9 2849 aa8.57□□□□□ -1.04
PDE4DIP-201ENST00000313431 KRTAP16-1A8MUX0 517 aa8.55□□□□□ -1.04
PDE4DIP-201ENST00000313431 FBN1P35555 2871 aaKnown RBP8.52□□□□□ -1.05
PDE4DIP-201ENST00000313431 VWFP04275 2813 aa8.5□□□□□ -1.05
PDE4DIP-201ENST00000313431 SVEP1Q4LDE5 3571 aa8.48□□□□□ -1.05
PDE4DIP-201ENST00000313431 TGP01266 2768 aa8.47□□□□□ -1.05
PDE4DIP-201ENST00000313431 KRTAP25-1Q3LHN0 102 aa8.47□□□□□ -1.05
PDE4DIP-201ENST00000313431 ZFHX3Q15911 3703 aa8.46□□□□□ -1.06
PDE4DIP-201ENST00000313431 ANK3Q12955 4377 aaKnown RBP8.43□□□□□ -1.06
PDE4DIP-201ENST00000313431 SPENQ96T58 3664 aaKnown RBP8.41□□□□□ -1.06
PDE4DIP-201ENST00000313431 PRO2289Q9P1D8 64 aa8.4□□□□□ -1.07
PDE4DIP-201ENST00000313431 KRTAP13-3Q3SY46 172 aa8.38□□□□□ -1.07
PDE4DIP-201ENST00000313431 CSMD2Q7Z408 3487 aa8.36□□□□□ -1.07
PDE4DIP-201ENST00000313431 BSNQ9UPA5 3926 aa8.29□□□□□ -1.08
PDE4DIP-201ENST00000313431 C10orf95Q9H7T3 257 aa8.28□□□□□ -1.08
PDE4DIP-201ENST00000313431 H0YAA0 97 aa8.27□□□□□ -1.09
PDE4DIP-201ENST00000313431 CUBNO60494 3623 aa8.22□□□□□ -1.09
PDE4DIP-201ENST00000313431 TRRAPQ9Y4A5 3859 aa8.19□□□□□ -1.1
PDE4DIP-201ENST00000313431 P0C880 135 aa8.15□□□□□ -1.1
PDE4DIP-201ENST00000313431 SRRM2Q9UQ35 2752 aaKnown RBP8.1□□□□□ -1.11
PDE4DIP-201ENST00000313431 FBN3Q75N90 2809 aa8.06□□□□□ -1.12
PDE4DIP-201ENST00000313431 PP632Q6XCG6 107 aa8.05□□□□□ -1.12
PDE4DIP-201ENST00000313431 NDUFAF8A1L188 74 aa8.01□□□□□ -1.13
PDE4DIP-201ENST00000313431 MEGF8Q7Z7M0 2845 aa7.94□□□□□ -1.14
PDE4DIP-201ENST00000313431 KRTAP3-1Q9BYR8 98 aa7.92□□□□□ -1.14
PDE4DIP-201ENST00000313431 HUWE1Q7Z6Z7 4374 aaKnown RBP7.87□□□□□ -1.15
PDE4DIP-201ENST00000313431 VPS13CQ709C8 3753 aa7.87□□□□□ -1.15
PDE4DIP-201ENST00000313431 KRTAP12-2P59991 146 aa7.8□□□□□ -1.16
PDE4DIP-201ENST00000313431 COL7A1Q02388 2944 aa7.78□□□□□ -1.16
PDE4DIP-201ENST00000313431 MT1HL1P0DM35 61 aa7.73□□□□□ -1.17
PDE4DIP-201ENST00000313431 KRTAP12-1P59990 96 aa7.69□□□□□ -1.18
PDE4DIP-201ENST00000313431 ZNF469Q96JG9 3925 aaPredicted RBP7.67□□□□□ -1.18
PDE4DIP-201ENST00000313431 KRTAP10-4P60372 401 aaPredicted RBP7.67□□□□□ -1.18
PDE4DIP-201ENST00000313431 KRTAP4-5Q9BYR2 181 aa7.63□□□□□ -1.19
PDE4DIP-201ENST00000313431 KRTAP10-6P60371 365 aaPredicted RBP7.62□□□□□ -1.19
PDE4DIP-201ENST00000313431 KRTAP13-4Q3LI77 160 aa7.59□□□□□ -1.19
PDE4DIP-201ENST00000313431 AKAP9Q99996 3911 aa7.57□□□□□ -1.2
PDE4DIP-201ENST00000313431 DNAH9Q9NYC9 4486 aa7.53□□□□□ -1.2
PDE4DIP-201ENST00000313431 ALMS1Q8TCU4 4167 aa7.46□□□□□ -1.22
PDE4DIP-201ENST00000313431 KRTAP3-3Q9BYR6 98 aa7.45□□□□□ -1.22
PDE4DIP-201ENST00000313431 CSMD3Q7Z407 3707 aa7.44□□□□□ -1.22
PDE4DIP-201ENST00000313431 KRTAP15-1Q3LI76 137 aa7.41□□□□□ -1.22
PDE4DIP-201ENST00000313431 KRTAP3-2Q9BYR7 98 aa7.4□□□□□ -1.23
PDE4DIP-201ENST00000313431 CRCT1Q9UGL9 99 aa7.37□□□□□ -1.23
PDE4DIP-201ENST00000313431 DNAH5Q8TE73 4624 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms