RNA–Protein interactions for RNA: ENST00000311895.7

ERCC4-201, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC4, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-201ENST00000311895 DMXL1Q9Y485 3027 aa4.92□□□□□ -1.62
ERCC4-201ENST00000311895 STAB2Q8WWQ8 2551 aa4.91□□□□□ -1.62
ERCC4-201ENST00000311895 TNRC18O15417 2968 aaPredicted RBP4.88□□□□□ -1.63
ERCC4-201ENST00000311895 LCE6AA0A183 80 aa4.87□□□□□ -1.63
ERCC4-201ENST00000311895 KRTAP7-1Q8IUC3 87 aa4.87□□□□□ -1.63
ERCC4-201ENST00000311895 DCHS1Q96JQ0 3298 aa4.87□□□□□ -1.63
ERCC4-201ENST00000311895 ZANQ9Y493 2812 aa4.86□□□□□ -1.63
ERCC4-201ENST00000311895 PLAC4Q8WY50 150 aa4.86□□□□□ -1.63
ERCC4-201ENST00000311895 HRNRQ86YZ3 2850 aaPredicted RBP4.86□□□□□ -1.63
ERCC4-201ENST00000311895 A6NN06 94 aa4.86□□□□□ -1.63
ERCC4-201ENST00000311895 ZFHX4Q86UP3 3567 aa4.84□□□□□ -1.63
ERCC4-201ENST00000311895 UTP20O75691 2785 aaKnown RBP4.84□□□□□ -1.63
ERCC4-201ENST00000311895 KRTAP25-1Q3LHN0 102 aa4.84□□□□□ -1.63
ERCC4-201ENST00000311895 BAHCC1Q9P281 2608 aa4.84□□□□□ -1.64
ERCC4-201ENST00000311895 APCP25054 2843 aa4.83□□□□□ -1.64
ERCC4-201ENST00000311895 ASPMQ8IZT6 3477 aa4.82□□□□□ -1.64
ERCC4-201ENST00000311895 CRYBG3Q68DQ2 2970 aa4.82□□□□□ -1.64
ERCC4-201ENST00000311895 ASB16-AS1Q495Z4 193 aa4.81□□□□□ -1.64
ERCC4-201ENST00000311895 NSD1Q96L73 2696 aaPredicted RBP4.81□□□□□ -1.64
ERCC4-201ENST00000311895 ITPR2Q14571 2701 aa4.81□□□□□ -1.64
ERCC4-201ENST00000311895 A8MUU9 505 aa4.8□□□□□ -1.64
ERCC4-201ENST00000311895 KRTAP16-1A8MUX0 517 aa4.8□□□□□ -1.64
ERCC4-201ENST00000311895 KRTAP13-2Q52LG2 175 aa4.79□□□□□ -1.64
ERCC4-201ENST00000311895 C20orf166-AS1Q96NR2 134 aa4.78□□□□□ -1.64
ERCC4-201ENST00000311895 NDUFAF8A1L188 74 aa4.78□□□□□ -1.64
ERCC4-201ENST00000311895 Q6ZRN7 208 aaPredicted RBP4.78□□□□□ -1.64
ERCC4-201ENST00000311895 RELNP78509 3460 aa4.78□□□□□ -1.64
ERCC4-201ENST00000311895 CELSR2Q9HCU4 2923 aa4.78□□□□□ -1.64
ERCC4-201ENST00000311895 HIVEP1P15822 2718 aa4.78□□□□□ -1.65
ERCC4-201ENST00000311895 FBN2P35556 2912 aa4.77□□□□□ -1.65
ERCC4-201ENST00000311895 LAMA5O15230 3695 aa4.75□□□□□ -1.65
ERCC4-201ENST00000311895 DMDP11532 3685 aa4.75□□□□□ -1.65
ERCC4-201ENST00000311895 NF1P21359 2839 aa4.74□□□□□ -1.65
ERCC4-201ENST00000311895 KRTAP13-1Q8IUC0 172 aa4.73□□□□□ -1.65
ERCC4-201ENST00000311895 CSMD1Q96PZ7 3565 aa4.72□□□□□ -1.65
ERCC4-201ENST00000311895 SMG1Q96Q15 3661 aaKnown RBP4.71□□□□□ -1.66
ERCC4-201ENST00000311895 DCHS2Q6V1P9 2916 aa4.71□□□□□ -1.66
ERCC4-201ENST00000311895 NIPBLQ6KC79 2804 aaeCLIP4.69□□□□□ -1.66
ERCC4-201ENST00000311895 MUC3AQ02505 3323 aa4.69□□□□□ -1.66
ERCC4-201ENST00000311895 RPS29P62273 56 aaKnown RBP4.68□□□□□ -1.66
ERCC4-201ENST00000311895 C10orf95Q9H7T3 257 aa4.67□□□□□ -1.66
ERCC4-201ENST00000311895 MXRA5Q9NR99 2828 aa4.67□□□□□ -1.66
ERCC4-201ENST00000311895 KMT2BQ9UMN6 2715 aaPredicted RBP4.65□□□□□ -1.66
ERCC4-201ENST00000311895 TNP1P09430 55 aa4.61□□□□□ -1.67
ERCC4-201ENST00000311895 SVEP1Q4LDE5 3571 aa4.6□□□□□ -1.67
ERCC4-201ENST00000311895 CELSR1Q9NYQ6 3014 aa4.58□□□□□ -1.68
ERCC4-201ENST00000311895 A0A1B0GVY2 172 aa4.57□□□□□ -1.68
ERCC4-201ENST00000311895 H0YAA0 97 aa4.55□□□□□ -1.68
ERCC4-201ENST00000311895 KRTAP10-8P60410 259 aa4.53□□□□□ -1.68
ERCC4-201ENST00000311895 CUBNO60494 3623 aa4.51□□□□□ -1.69
ERCC4-201ENST00000311895 TENM4Q6N022 2769 aa4.5□□□□□ -1.69
ERCC4-201ENST00000311895 KRTAP1-4P0C5Y4 121 aa4.5□□□□□ -1.69
ERCC4-201ENST00000311895 XP32Q5T750 250 aa4.5□□□□□ -1.69
ERCC4-201ENST00000311895 SPENQ96T58 3664 aaKnown RBP4.48□□□□□ -1.69
ERCC4-201ENST00000311895 TENM3Q9P273 2699 aa4.48□□□□□ -1.69
ERCC4-201ENST00000311895 P0C880 135 aa4.44□□□□□ -1.7
ERCC4-201ENST00000311895 TENM1Q9UKZ4 2725 aa4.42□□□□□ -1.7
ERCC4-201ENST00000311895 PP632Q6XCG6 107 aa4.41□□□□□ -1.7
ERCC4-201ENST00000311895 VWFP04275 2813 aa4.4□□□□□ -1.7
ERCC4-201ENST00000311895 TGP01266 2768 aa4.39□□□□□ -1.71
ERCC4-201ENST00000311895 PDZD2O15018 2839 aa4.38□□□□□ -1.71
ERCC4-201ENST00000311895 KRTAP10-10P60014 251 aa4.37□□□□□ -1.71
ERCC4-201ENST00000311895 NBPF19A0A087WUL8 3843 aa4.37□□□□□ -1.71
ERCC4-201ENST00000311895 FBN1P35555 2871 aaKnown RBP4.33□□□□□ -1.72
ERCC4-201ENST00000311895 TENM2Q9NT68 2774 aa4.32□□□□□ -1.72
ERCC4-201ENST00000311895 BSNQ9UPA5 3926 aa4.32□□□□□ -1.72
ERCC4-201ENST00000311895 TPRXLQ17RH7 258 aa4.32□□□□□ -1.72
ERCC4-201ENST00000311895 CSMD2Q7Z408 3487 aa4.32□□□□□ -1.72
ERCC4-201ENST00000311895 KRTAP13-3Q3SY46 172 aa4.31□□□□□ -1.72
ERCC4-201ENST00000311895 PKD1L1Q8TDX9 2849 aa4.3□□□□□ -1.72
ERCC4-201ENST00000311895 KRTAP12-2P59991 146 aa4.3□□□□□ -1.72
ERCC4-201ENST00000311895 OTOGQ6ZRI0 2925 aa4.25□□□□□ -1.73
ERCC4-201ENST00000311895 KRTAP21-3Q3LHN1 58 aa4.24□□□□□ -1.73
ERCC4-201ENST00000311895 PRO2289Q9P1D8 64 aa4.23□□□□□ -1.73
ERCC4-201ENST00000311895 ZFHX3Q15911 3703 aa4.19□□□□□ -1.74
ERCC4-201ENST00000311895 ANK3Q12955 4377 aaKnown RBP4.18□□□□□ -1.74
ERCC4-201ENST00000311895 SRRM2Q9UQ35 2752 aaKnown RBP4.18□□□□□ -1.74
ERCC4-201ENST00000311895 TRRAPQ9Y4A5 3859 aa4.17□□□□□ -1.74
ERCC4-201ENST00000311895 VPS13CQ709C8 3753 aa4.17□□□□□ -1.74
ERCC4-201ENST00000311895 KRTAP12-1P59990 96 aa4.16□□□□□ -1.74
ERCC4-201ENST00000311895 KRTAP3-1Q9BYR8 98 aa4.13□□□□□ -1.75
ERCC4-201ENST00000311895 KRTAP13-4Q3LI77 160 aa4.13□□□□□ -1.75
ERCC4-201ENST00000311895 FBN3Q75N90 2809 aa4.1□□□□□ -1.75
ERCC4-201ENST00000311895 KRTAP15-1Q3LI76 137 aa4.02□□□□□ -1.77
ERCC4-201ENST00000311895 MEGF8Q7Z7M0 2845 aa4.02□□□□□ -1.77
ERCC4-201ENST00000311895 KRTAP10-6P60371 365 aaPredicted RBP4□□□□□ -1.77
ERCC4-201ENST00000311895 ZNF469Q96JG9 3925 aaPredicted RBP3.98□□□□□ -1.77
ERCC4-201ENST00000311895 COL7A1Q02388 2944 aa3.98□□□□□ -1.77
ERCC4-201ENST00000311895 CSMD3Q7Z407 3707 aa3.95□□□□□ -1.78
ERCC4-201ENST00000311895 AKAP9Q99996 3911 aa3.93□□□□□ -1.78
ERCC4-201ENST00000311895 HUWE1Q7Z6Z7 4374 aaKnown RBP3.91□□□□□ -1.78
ERCC4-201ENST00000311895 CRCT1Q9UGL9 99 aa3.89□□□□□ -1.79
ERCC4-201ENST00000311895 KRTAP3-3Q9BYR6 98 aa3.85□□□□□ -1.79
ERCC4-201ENST00000311895 KRTAP3-2Q9BYR7 98 aa3.85□□□□□ -1.79
ERCC4-201ENST00000311895 MT1HL1P0DM35 61 aa3.79□□□□□ -1.8
ERCC4-201ENST00000311895 KRTAP10-12P60413 245 aa3.78□□□□□ -1.8
ERCC4-201ENST00000311895 DNAH10Q8IVF4 4471 aa3.75□□□□□ -1.81
ERCC4-201ENST00000311895 KRTAP4-5Q9BYR2 181 aa3.75□□□□□ -1.81
ERCC4-201ENST00000311895 INE1O15225 51 aa3.74□□□□□ -1.81
ERCC4-201ENST00000311895 DNAH9Q9NYC9 4486 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms