RNA–Protein interactions for RNA: ENST00000309241.9

PPARGC1B-201, Transcript of PPARG coactivator 1 beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PPARGC1B, Length 10,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-201ENST00000309241 ZANQ9Y493 2812 aa4.8□□□□□ -1.64
PPARGC1B-201ENST00000309241 UTRNP46939 3433 aa4.78□□□□□ -1.64
PPARGC1B-201ENST00000309241 KRTAP11-1Q8IUC1 163 aa4.77□□□□□ -1.65
PPARGC1B-201ENST00000309241 DCHS2Q6V1P9 2916 aa4.77□□□□□ -1.65
PPARGC1B-201ENST00000309241 TENM2Q9NT68 2774 aa4.76□□□□□ -1.65
PPARGC1B-201ENST00000309241 ZZEF1O43149 2961 aa4.75□□□□□ -1.65
PPARGC1B-201ENST00000309241 PRUNE2Q8WUY3 3088 aa4.75□□□□□ -1.65
PPARGC1B-201ENST00000309241 VPS13AQ96RL7 3174 aa4.74□□□□□ -1.65
PPARGC1B-201ENST00000309241 TNP1P09430 55 aa4.73□□□□□ -1.65
PPARGC1B-201ENST00000309241 ZFHX3Q15911 3703 aa4.73□□□□□ -1.65
PPARGC1B-201ENST00000309241 WDFY4Q6ZS81 3184 aa4.71□□□□□ -1.66
PPARGC1B-201ENST00000309241 COL12A1Q99715 3063 aa4.69□□□□□ -1.66
PPARGC1B-201ENST00000309241 KRTAP13-1Q8IUC0 172 aa4.69□□□□□ -1.66
PPARGC1B-201ENST00000309241 FREM2Q5SZK8 3169 aa4.66□□□□□ -1.66
PPARGC1B-201ENST00000309241 C10orf95Q9H7T3 257 aa4.66□□□□□ -1.66
PPARGC1B-201ENST00000309241 HRNRQ86YZ3 2850 aaPredicted RBP4.66□□□□□ -1.66
PPARGC1B-201ENST00000309241 FBN2P35556 2912 aa4.64□□□□□ -1.67
PPARGC1B-201ENST00000309241 H0YAA0 97 aa4.64□□□□□ -1.67
PPARGC1B-201ENST00000309241 LAMA1P25391 3075 aa4.63□□□□□ -1.67
PPARGC1B-201ENST00000309241 Q6ZRN7 208 aaPredicted RBP4.63□□□□□ -1.67
PPARGC1B-201ENST00000309241 RANBP2P49792 3224 aaKnown RBP4.61□□□□□ -1.67
PPARGC1B-201ENST00000309241 HTTP42858 3142 aa4.6□□□□□ -1.67
PPARGC1B-201ENST00000309241 DMXL1Q9Y485 3027 aa4.59□□□□□ -1.67
PPARGC1B-201ENST00000309241 MXRA5Q9NR99 2828 aa4.59□□□□□ -1.68
PPARGC1B-201ENST00000309241 P0C880 135 aa4.59□□□□□ -1.68
PPARGC1B-201ENST00000309241 KRTAP10-8P60410 259 aa4.59□□□□□ -1.68
PPARGC1B-201ENST00000309241 PRO2289Q9P1D8 64 aa4.55□□□□□ -1.68
PPARGC1B-201ENST00000309241 KRTAP13-2Q52LG2 175 aa4.52□□□□□ -1.69
PPARGC1B-201ENST00000309241 KRTAP7-1Q8IUC3 87 aa4.51□□□□□ -1.69
PPARGC1B-201ENST00000309241 KRTAP10-10P60014 251 aa4.5□□□□□ -1.69
PPARGC1B-201ENST00000309241 A0A1B0GVY2 172 aa4.5□□□□□ -1.69
PPARGC1B-201ENST00000309241 ATMQ13315 3056 aa4.5□□□□□ -1.69
PPARGC1B-201ENST00000309241 COL7A1Q02388 2944 aa4.47□□□□□ -1.69
PPARGC1B-201ENST00000309241 CELSR1Q9NYQ6 3014 aa4.45□□□□□ -1.7
PPARGC1B-201ENST00000309241 BOD1L1Q8NFC6 3051 aa4.45□□□□□ -1.7
PPARGC1B-201ENST00000309241 TPRXLQ17RH7 258 aa4.44□□□□□ -1.7
PPARGC1B-201ENST00000309241 ADGRG4Q8IZF6 3080 aa4.44□□□□□ -1.7
PPARGC1B-201ENST00000309241 XIRP2A4UGR9 3374 aa4.41□□□□□ -1.7
PPARGC1B-201ENST00000309241 MKI67P46013 3256 aaKnown RBP4.41□□□□□ -1.7
PPARGC1B-201ENST00000309241 XP32Q5T750 250 aa4.4□□□□□ -1.71
PPARGC1B-201ENST00000309241 INE1O15225 51 aa4.38□□□□□ -1.71
PPARGC1B-201ENST00000309241 FBN3Q75N90 2809 aa4.36□□□□□ -1.71
PPARGC1B-201ENST00000309241 COL6A3P12111 3177 aa4.36□□□□□ -1.71
PPARGC1B-201ENST00000309241 MEGF8Q7Z7M0 2845 aa4.36□□□□□ -1.71
PPARGC1B-201ENST00000309241 BRCA2P51587 3418 aa4.36□□□□□ -1.71
PPARGC1B-201ENST00000309241 KRTAP13-3Q3SY46 172 aa4.33□□□□□ -1.72
PPARGC1B-201ENST00000309241 LAMA3Q16787 3333 aa4.32□□□□□ -1.72
PPARGC1B-201ENST00000309241 DNAH14Q0VDD8 3507 aa4.31□□□□□ -1.72
PPARGC1B-201ENST00000309241 FBN1P35555 2871 aaKnown RBP4.29□□□□□ -1.72
PPARGC1B-201ENST00000309241 KRTAP13-4Q3LI77 160 aa4.27□□□□□ -1.73
PPARGC1B-201ENST00000309241 KRTAP15-1Q3LI76 137 aa4.27□□□□□ -1.73
PPARGC1B-201ENST00000309241 VCANP13611 3396 aa4.27□□□□□ -1.73
PPARGC1B-201ENST00000309241 SZT2Q5T011 3432 aa4.26□□□□□ -1.73
PPARGC1B-201ENST00000309241 KRTAP23-1A1A580 65 aa4.26□□□□□ -1.73
PPARGC1B-201ENST00000309241 CELSR3Q9NYQ7 3312 aa4.25□□□□□ -1.73
PPARGC1B-201ENST00000309241 KRTAP1-4P0C5Y4 121 aa4.24□□□□□ -1.73
PPARGC1B-201ENST00000309241 KRTAP12-2P59991 146 aa4.23□□□□□ -1.73
PPARGC1B-201ENST00000309241 SPTBN5Q9NRC6 3674 aaKnown RBP4.22□□□□□ -1.73
PPARGC1B-201ENST00000309241 CFAP47Q6ZTR5 3102 aa4.21□□□□□ -1.73
PPARGC1B-201ENST00000309241 USP34Q70CQ2 3546 aa4.21□□□□□ -1.73
PPARGC1B-201ENST00000309241 DMDP11532 3685 aa4.21□□□□□ -1.74
PPARGC1B-201ENST00000309241 WDFY3Q8IZQ1 3526 aa4.18□□□□□ -1.74
PPARGC1B-201ENST00000309241 UNC80Q8N2C7 3258 aa4.16□□□□□ -1.74
PPARGC1B-201ENST00000309241 LAMA5O15230 3695 aa4.16□□□□□ -1.74
PPARGC1B-201ENST00000309241 SMG1Q96Q15 3661 aaKnown RBP4.16□□□□□ -1.74
PPARGC1B-201ENST00000309241 CDH23Q9H251 3354 aa4.14□□□□□ -1.75
PPARGC1B-201ENST00000309241 MYO15AQ9UKN7 3530 aa4.13□□□□□ -1.75
PPARGC1B-201ENST00000309241 NBPF19A0A087WUL8 3843 aa4.13□□□□□ -1.75
PPARGC1B-201ENST00000309241 SPEGQ15772 3267 aa4.12□□□□□ -1.75
PPARGC1B-201ENST00000309241 KRTAP19-4Q3LI73 84 aa4.1□□□□□ -1.75
PPARGC1B-201ENST00000309241 OTOGQ6ZRI0 2925 aa4.1□□□□□ -1.75
PPARGC1B-201ENST00000309241 EYSQ5T1H1 3165 aa4.1□□□□□ -1.75
PPARGC1B-201ENST00000309241 KRTAP12-1P59990 96 aa4.08□□□□□ -1.76
PPARGC1B-201ENST00000309241 ZFHX4Q86UP3 3567 aa4.04□□□□□ -1.76
PPARGC1B-201ENST00000309241 SPENQ96T58 3664 aaKnown RBP4.04□□□□□ -1.76
PPARGC1B-201ENST00000309241 VPS13CQ709C8 3753 aa3.99□□□□□ -1.77
PPARGC1B-201ENST00000309241 AKAP9Q99996 3911 aa3.99□□□□□ -1.77
PPARGC1B-201ENST00000309241 KRTAP10-6P60371 365 aaPredicted RBP3.94□□□□□ -1.78
PPARGC1B-201ENST00000309241 KRTAP3-1Q9BYR8 98 aa3.94□□□□□ -1.78
PPARGC1B-201ENST00000309241 ALMS1Q8TCU4 4167 aa3.93□□□□□ -1.78
PPARGC1B-201ENST00000309241 CRCT1Q9UGL9 99 aa3.92□□□□□ -1.78
PPARGC1B-201ENST00000309241 ASPMQ8IZT6 3477 aa3.92□□□□□ -1.78
PPARGC1B-201ENST00000309241 LOC400499M0QZD8 3231 aa3.89□□□□□ -1.79
PPARGC1B-201ENST00000309241 CSMD1Q96PZ7 3565 aa3.89□□□□□ -1.79
PPARGC1B-201ENST00000309241 DCHS1Q96JQ0 3298 aa3.88□□□□□ -1.79
PPARGC1B-201ENST00000309241 RELNP78509 3460 aa3.84□□□□□ -1.79
PPARGC1B-201ENST00000309241 KRTAP10-12P60413 245 aa3.81□□□□□ -1.8
PPARGC1B-201ENST00000309241 KRTAP3-2Q9BYR7 98 aa3.78□□□□□ -1.8
PPARGC1B-201ENST00000309241 MUC3AQ02505 3323 aa3.77□□□□□ -1.81
PPARGC1B-201ENST00000309241 BSNQ9UPA5 3926 aa3.76□□□□□ -1.81
PPARGC1B-201ENST00000309241 SVEP1Q4LDE5 3571 aa3.75□□□□□ -1.81
PPARGC1B-201ENST00000309241 TRRAPQ9Y4A5 3859 aa3.75□□□□□ -1.81
PPARGC1B-201ENST00000309241 KRTAP3-3Q9BYR6 98 aa3.69□□□□□ -1.82
PPARGC1B-201ENST00000309241 CUBNO60494 3623 aa3.68□□□□□ -1.82
PPARGC1B-201ENST00000309241 LYSTQ99698 3801 aa3.64□□□□□ -1.83
PPARGC1B-201ENST00000309241 KRTAP12-3P60328 96 aa3.62□□□□□ -1.83
PPARGC1B-201ENST00000309241 KRTAP8-1Q8IUC2 63 aa3.62□□□□□ -1.83
PPARGC1B-201ENST00000309241 CSMD3Q7Z407 3707 aa3.62□□□□□ -1.83
PPARGC1B-201ENST00000309241 LORP23490 312 aaPredicted RBP3.61□□□□□ -1.83
PPARGC1B-201ENST00000309241 HECTD4Q9Y4D8 3996 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms