RNA–Protein interactions for RNA: ENST00000309052.8

LCLAT1-201, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene LCLAT1, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-201ENST00000309052 LINC00313P59037 77 aa4.98□□□□□ -1.61
LCLAT1-201ENST00000309052 TMEM258P61165 79 aa4.98□□□□□ -1.61
LCLAT1-201ENST00000309052 J3KT08 172 aa4.97□□□□□ -1.61
LCLAT1-201ENST00000309052 C1orf195Q5TG92 126 aa4.96□□□□□ -1.61
LCLAT1-201ENST00000309052 LIMD2Q9BT23 127 aa4.96□□□□□ -1.61
LCLAT1-201ENST00000309052 RYR2Q92736 4967 aa4.96□□□□□ -1.61
LCLAT1-201ENST00000309052 A0A1B0GW54 56 aa4.96□□□□□ -1.62
LCLAT1-201ENST00000309052 C1orf64Q8NEQ6 169 aa4.96□□□□□ -1.62
LCLAT1-201ENST00000309052 LRP1Q07954 4544 aaKnown RBP4.96□□□□□ -1.62
LCLAT1-201ENST00000309052 APOBP04114 4563 aaKnown RBP4.96□□□□□ -1.62
LCLAT1-201ENST00000309052 MYCBP2O75592 4640 aa4.95□□□□□ -1.62
LCLAT1-201ENST00000309052 FAT2Q9NYQ8 4349 aa4.95□□□□□ -1.62
LCLAT1-201ENST00000309052 MMP24-AS1A0A0U1RRL7 71 aa4.94□□□□□ -1.62
LCLAT1-201ENST00000309052 OCR1Q9BZK8 76 aa4.94□□□□□ -1.62
LCLAT1-201ENST00000309052 MRPL34Q9BQ48 92 aaKnown RBP4.94□□□□□ -1.62
LCLAT1-201ENST00000309052 FAT3Q8TDW7 4589 aa4.93□□□□□ -1.62
LCLAT1-201ENST00000309052 FAM236DA0A1B0GTK5 79 aa4.93□□□□□ -1.62
LCLAT1-201ENST00000309052 FAM236CP0DP71 79 aa4.93□□□□□ -1.62
LCLAT1-201ENST00000309052 TRAV22A0A0B4J277 110 aa4.92□□□□□ -1.62
LCLAT1-201ENST00000309052 SPINK1P00995 79 aa4.92□□□□□ -1.62
LCLAT1-201ENST00000309052 RYR1P21817 5038 aa4.92□□□□□ -1.62
LCLAT1-201ENST00000309052 FAM229BQ4G0N7 80 aa4.91□□□□□ -1.62
LCLAT1-201ENST00000309052 MPLKIPQ8TAP9 179 aa4.91□□□□□ -1.62
LCLAT1-201ENST00000309052 PKD1P98161 4303 aa4.91□□□□□ -1.62
LCLAT1-201ENST00000309052 ALMS1Q8TCU4 4167 aa4.9□□□□□ -1.62
LCLAT1-201ENST00000309052 Q8N1X5 172 aa4.9□□□□□ -1.63
LCLAT1-201ENST00000309052 EPPK1P58107 5090 aaKnown RBP4.9□□□□□ -1.63
LCLAT1-201ENST00000309052 J3QL48 77 aa4.89□□□□□ -1.63
LCLAT1-201ENST00000309052 C5orf47Q569G3 176 aa4.89□□□□□ -1.63
LCLAT1-201ENST00000309052 H7BZZ5 65 aa4.89□□□□□ -1.63
LCLAT1-201ENST00000309052 Q5W150 140 aa4.87□□□□□ -1.63
LCLAT1-201ENST00000309052 Q8N9P0 234 aaPredicted RBP4.86□□□□□ -1.63
LCLAT1-201ENST00000309052 KRTAP29-1A8MX34 341 aaPredicted RBP4.86□□□□□ -1.63
LCLAT1-201ENST00000309052 KRTAP4-5Q9BYR2 181 aa4.85□□□□□ -1.63
LCLAT1-201ENST00000309052 CD164Q04900 197 aa4.85□□□□□ -1.63
LCLAT1-201ENST00000309052 SPAG11AQ6PDA7 123 aa4.85□□□□□ -1.63
LCLAT1-201ENST00000309052 A0A0U1RQV1 116 aa4.84□□□□□ -1.63
LCLAT1-201ENST00000309052 KLKP1Q107X0 134 aa4.84□□□□□ -1.63
LCLAT1-201ENST00000309052 KRTAP17-1Q9BYP8 105 aa4.83□□□□□ -1.64
LCLAT1-201ENST00000309052 IGLV7-46A0A075B6I9 117 aa4.82□□□□□ -1.64
LCLAT1-201ENST00000309052 TP53AIP1Q9HCN2 124 aa4.81□□□□□ -1.64
LCLAT1-201ENST00000309052 C8orf87E5RJ46 101 aa4.8□□□□□ -1.64
LCLAT1-201ENST00000309052 C4orf26Q17RF5 130 aa4.8□□□□□ -1.64
LCLAT1-201ENST00000309052 CHKB-CPT1BH3BT56 60 aa4.8□□□□□ -1.64
LCLAT1-201ENST00000309052 NDUFC1O43677 76 aa4.8□□□□□ -1.64
LCLAT1-201ENST00000309052 KRTAP10-4P60372 401 aaPredicted RBP4.78□□□□□ -1.64
LCLAT1-201ENST00000309052 PSPHP1O15172 72 aa4.77□□□□□ -1.65
LCLAT1-201ENST00000309052 ATP11AUNQ6ZP68 121 aa4.76□□□□□ -1.65
LCLAT1-201ENST00000309052 OXTP01178 125 aa4.75□□□□□ -1.65
LCLAT1-201ENST00000309052 C7orf65Q6ZTY9 151 aa4.75□□□□□ -1.65
LCLAT1-201ENST00000309052 ATP5EP56381 51 aaPredicted RBP4.75□□□□□ -1.65
LCLAT1-201ENST00000309052 V9GYY9 64 aa4.75□□□□□ -1.65
LCLAT1-201ENST00000309052 HRES1P13985 223 aa4.73□□□□□ -1.65
LCLAT1-201ENST00000309052 HSPG2P98160 4391 aa4.73□□□□□ -1.65
LCLAT1-201ENST00000309052 BRK1Q8WUW1 75 aa4.73□□□□□ -1.65
LCLAT1-201ENST00000309052 CYP4F30PQ9H0H9 118 aa4.72□□□□□ -1.65
LCLAT1-201ENST00000309052 SERP1Q9Y6X1 66 aa4.72□□□□□ -1.65
LCLAT1-201ENST00000309052 LOC101927531A0A1B0GV80 90 aa4.72□□□□□ -1.65
LCLAT1-201ENST00000309052 SVIPQ8NHG7 77 aa4.72□□□□□ -1.65
LCLAT1-201ENST00000309052 SPINK7P58062 85 aa4.7□□□□□ -1.66
LCLAT1-201ENST00000309052 ZCCHC13Q8WW36 166 aaKnown RBP4.7□□□□□ -1.66
LCLAT1-201ENST00000309052 COA5Q86WW8 74 aa4.7□□□□□ -1.66
LCLAT1-201ENST00000309052 HERC2O95714 4834 aa4.69□□□□□ -1.66
LCLAT1-201ENST00000309052 ASB16-AS1Q495Z4 193 aa4.69□□□□□ -1.66
LCLAT1-201ENST00000309052 KRTAP10-8P60410 259 aa4.69□□□□□ -1.66
LCLAT1-201ENST00000309052 SEC61GP60059 68 aa4.68□□□□□ -1.66
LCLAT1-201ENST00000309052 H3BPC8 53 aa4.67□□□□□ -1.66
LCLAT1-201ENST00000309052 Q5XG85 94 aa4.67□□□□□ -1.66
LCLAT1-201ENST00000309052 SMIM26A0A096LP01 95 aa4.66□□□□□ -1.66
LCLAT1-201ENST00000309052 KRTAP16-1A8MUX0 517 aa4.66□□□□□ -1.66
LCLAT1-201ENST00000309052 LRP2P98164 4655 aa4.66□□□□□ -1.66
LCLAT1-201ENST00000309052 PRR15LQ9BU68 103 aa4.66□□□□□ -1.66
LCLAT1-201ENST00000309052 K7ERS5 55 aa4.65□□□□□ -1.67
LCLAT1-201ENST00000309052 MT1HL1P0DM35 61 aa4.65□□□□□ -1.67
LCLAT1-201ENST00000309052 ABCA13Q86UQ4 5058 aa4.64□□□□□ -1.67
LCLAT1-201ENST00000309052 A8MUN3 132 aa4.64□□□□□ -1.67
LCLAT1-201ENST00000309052 SPTSSBQ8NFR3 76 aa4.64□□□□□ -1.67
LCLAT1-201ENST00000309052 ACYP2P14621 99 aa4.63□□□□□ -1.67
LCLAT1-201ENST00000309052 FP248Q71RG6 208 aaPredicted RBP4.62□□□□□ -1.67
LCLAT1-201ENST00000309052 XP32Q5T750 250 aa4.61□□□□□ -1.67
LCLAT1-201ENST00000309052 RPS29P62273 56 aaKnown RBP4.6□□□□□ -1.67
LCLAT1-201ENST00000309052 RPS28P62857 69 aaKnown RBP4.59□□□□□ -1.67
LCLAT1-201ENST00000309052 A6NED7 52 aa4.58□□□□□ -1.68
LCLAT1-201ENST00000309052 LPAP08519 4548 aa4.58□□□□□ -1.68
LCLAT1-201ENST00000309052 HERC1Q15751 4861 aa4.58□□□□□ -1.68
LCLAT1-201ENST00000309052 SPANXA2-OT1Q8N9U9 137 aa4.57□□□□□ -1.68
LCLAT1-201ENST00000309052 PKHD1L1Q86WI1 4243 aa4.57□□□□□ -1.68
LCLAT1-201ENST00000309052 A8MUU9 505 aa4.56□□□□□ -1.68
LCLAT1-201ENST00000309052 KRTAP13-3Q3SY46 172 aa4.55□□□□□ -1.68
LCLAT1-201ENST00000309052 COX6B2Q6YFQ2 88 aa4.55□□□□□ -1.68
LCLAT1-201ENST00000309052 C20orf166-AS1Q96NR2 134 aa4.55□□□□□ -1.68
LCLAT1-201ENST00000309052 MUC2Q02817 5179 aa4.54□□□□□ -1.68
LCLAT1-201ENST00000309052 RPL37P61927 97 aaKnown RBP4.53□□□□□ -1.68
LCLAT1-201ENST00000309052 A0A1B0GU69 56 aa4.52□□□□□ -1.69
LCLAT1-201ENST00000309052 Q75L30 129 aa4.52□□□□□ -1.69
LCLAT1-201ENST00000309052 PMAIP1Q13794 54 aa4.51□□□□□ -1.69
LCLAT1-201ENST00000309052 PCLOQ9Y6V0 5065 aa4.51□□□□□ -1.69
LCLAT1-201ENST00000309052 DMAC1Q96GE9 116 aa4.5□□□□□ -1.69
LCLAT1-201ENST00000309052 PRO0628Q9UI54 55 aa4.49□□□□□ -1.69
LCLAT1-201ENST00000309052 RNF213Q63HN8 5207 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms