RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 IGHV6-1A0A0B4J1U7 121 aa14.87□□□□□ -0.03
HDAC3-201ENST00000305264 A0A1B0GVX0 72 aa14.87□□□□□ -0.03
HDAC3-201ENST00000305264 CDIP1Q9H305 208 aa14.87□□□□□ -0.03
HDAC3-201ENST00000305264 IGKV3D-7A0A0C4DH55 119 aa14.86□□□□□ -0.03
HDAC3-201ENST00000305264 NDUFB1O75438 58 aa14.84□□□□□ -0.03
HDAC3-201ENST00000305264 NOTCH2NLQ7Z3S9 236 aa14.84□□□□□ -0.03
HDAC3-201ENST00000305264 K7EQZ3 153 aa14.82□□□□□ -0.04
HDAC3-201ENST00000305264 XP32Q5T750 250 aa14.82□□□□□ -0.04
HDAC3-201ENST00000305264 Q8N9L7 120 aa14.8□□□□□ -0.04
HDAC3-201ENST00000305264 PRR15Q8IV56 129 aa14.8□□□□□ -0.04
HDAC3-201ENST00000305264 LINC00313P59037 77 aa14.78□□□□□ -0.04
HDAC3-201ENST00000305264 K7ERU9 68 aa14.76□□□□□ -0.05
HDAC3-201ENST00000305264 CXCL6P80162 114 aa14.74□□□□□ -0.05
HDAC3-201ENST00000305264 C8orf87E5RJ46 101 aa14.74□□□□□ -0.05
HDAC3-201ENST00000305264 C8orf17Q9NRJ1 99 aa14.72□□□□□ -0.05
HDAC3-201ENST00000305264 KRTAP16-1A8MUX0 517 aa14.71□□□□□ -0.06
HDAC3-201ENST00000305264 UBR4Q5T4S7 5183 aa14.7□□□□□ -0.06
HDAC3-201ENST00000305264 LINC00643Q86TS7 51 aa14.69□□□□□ -0.06
HDAC3-201ENST00000305264 ATP5EP2Q5VTU8 51 aa14.67□□□□□ -0.06
HDAC3-201ENST00000305264 MMP24-AS1A0A0U1RRL7 71 aa14.67□□□□□ -0.06
HDAC3-201ENST00000305264 C20orf166-AS1Q96NR2 134 aa14.6□□□□□ -0.07
HDAC3-201ENST00000305264 RPL37P61927 97 aaKnown RBP14.6□□□□□ -0.07
HDAC3-201ENST00000305264 A8MUU9 505 aa14.58□□□□□ -0.08
HDAC3-201ENST00000305264 Q75L30 129 aa14.58□□□□□ -0.08
HDAC3-201ENST00000305264 MUC17Q685J3 4493 aa14.57□□□□□ -0.08
HDAC3-201ENST00000305264 hDV103S1A0JD37 113 aa14.56□□□□□ -0.08
HDAC3-201ENST00000305264 WFDC13Q8IUB5 93 aa14.56□□□□□ -0.08
HDAC3-201ENST00000305264 TMEM254Q8TBM7 123 aa14.53□□□□□ -0.08
HDAC3-201ENST00000305264 HCG22E2RYF7 251 aa14.52□□□□□ -0.09
HDAC3-201ENST00000305264 HIST1H4AP62805 103 aaKnown RBP14.52□□□□□ -0.09
HDAC3-201ENST00000305264 CASC2Q6XLA1 102 aa14.51□□□□□ -0.09
HDAC3-201ENST00000305264 MRPL34Q9BQ48 92 aaKnown RBP14.5□□□□□ -0.09
HDAC3-201ENST00000305264 SEC61BP60468 96 aaKnown RBP14.49□□□□□ -0.09
HDAC3-201ENST00000305264 Q8N9P0 234 aaPredicted RBP14.49□□□□□ -0.09
HDAC3-201ENST00000305264 PCOTHQ58A44 107 aa14.47□□□□□ -0.09
HDAC3-201ENST00000305264 A0A087WVE0 104 aa14.44□□□□□ -0.1
HDAC3-201ENST00000305264 RNF213Q63HN8 5207 aa14.42□□□□□ -0.1
HDAC3-201ENST00000305264 MT-ATP8P03928 68 aa14.42□□□□□ -0.1
HDAC3-201ENST00000305264 ATP11AUNQ6ZP68 121 aa14.41□□□□□ -0.1
HDAC3-201ENST00000305264 NDUFS5O43920 106 aa14.38□□□□□ -0.11
HDAC3-201ENST00000305264 MUC2Q02817 5179 aa14.35□□□□□ -0.11
HDAC3-201ENST00000305264 KRTAP4-1Q9BYQ7 146 aa14.31□□□□□ -0.12
HDAC3-201ENST00000305264 ZCCHC13Q8WW36 166 aaKnown RBP14.3□□□□□ -0.12
HDAC3-201ENST00000305264 IMUPQ9GZP8 106 aa14.26□□□□□ -0.13
HDAC3-201ENST00000305264 Q5W150 140 aa14.19□□□□□ -0.14
HDAC3-201ENST00000305264 TP53AIP1Q9HCN2 124 aa14.14□□□□□ -0.15
HDAC3-201ENST00000305264 FAM236AA0A1B0GUQ0 79 aa14.07□□□□□ -0.16
HDAC3-201ENST00000305264 FAM236BA0A1B0GV22 79 aa14.07□□□□□ -0.16
HDAC3-201ENST00000305264 SCGB1A1P11684 91 aa14.03□□□□□ -0.16
HDAC3-201ENST00000305264 OCR1Q9BZK8 76 aa14.03□□□□□ -0.16
HDAC3-201ENST00000305264 SPINK7P58062 85 aa14.02□□□□□ -0.17
HDAC3-201ENST00000305264 UQCRQO14949 82 aa14□□□□□ -0.17
HDAC3-201ENST00000305264 TRAV22A0A0B4J277 110 aa13.98□□□□□ -0.17
HDAC3-201ENST00000305264 IGKV2D-30A0A075B6S6 120 aa13.96□□□□□ -0.17
HDAC3-201ENST00000305264 IGKV2-30P06310 120 aa13.96□□□□□ -0.17
HDAC3-201ENST00000305264 C7orf65Q6ZTY9 151 aa13.91□□□□□ -0.18
HDAC3-201ENST00000305264 HRES1P13985 223 aa13.91□□□□□ -0.18
HDAC3-201ENST00000305264 H0Y9P7 68 aa13.9□□□□□ -0.18
HDAC3-201ENST00000305264 KRTAP19-2Q3LHN2 52 aa13.85□□□□□ -0.19
HDAC3-201ENST00000305264 FAT4Q6V0I7 4981 aa13.84□□□□□ -0.19
HDAC3-201ENST00000305264 ATOX1O00244 68 aa13.83□□□□□ -0.19
HDAC3-201ENST00000305264 SMIM20Q8N5G0 67 aa13.81□□□□□ -0.2
HDAC3-201ENST00000305264 MPLKIPQ8TAP9 179 aa13.81□□□□□ -0.2
HDAC3-201ENST00000305264 TRAV7A0A075B6U4 112 aa13.79□□□□□ -0.2
HDAC3-201ENST00000305264 C5orf47Q569G3 176 aa13.79□□□□□ -0.2
HDAC3-201ENST00000305264 LOC101927531A0A1B0GV80 90 aa13.78□□□□□ -0.2
HDAC3-201ENST00000305264 MP68P56378 58 aa13.78□□□□□ -0.2
HDAC3-201ENST00000305264 LINC00208Q96KT6 92 aa13.76□□□□□ -0.21
HDAC3-201ENST00000305264 CYP4F30PQ9H0H9 118 aa13.76□□□□□ -0.21
HDAC3-201ENST00000305264 C1orf64Q8NEQ6 169 aa13.75□□□□□ -0.21
HDAC3-201ENST00000305264 A0A0U1RQV1 116 aa13.74□□□□□ -0.21
HDAC3-201ENST00000305264 LCE2CQ5TA81 110 aa13.74□□□□□ -0.21
HDAC3-201ENST00000305264 RBM12B-AS1Q9P1G2 102 aa13.72□□□□□ -0.21
HDAC3-201ENST00000305264 COX6B2Q6YFQ2 88 aa13.71□□□□□ -0.21
HDAC3-201ENST00000305264 H3BPC8 53 aa13.65□□□□□ -0.22
HDAC3-201ENST00000305264 SERP2Q8N6R1 65 aa13.65□□□□□ -0.22
HDAC3-201ENST00000305264 FAM236DA0A1B0GTK5 79 aa13.65□□□□□ -0.22
HDAC3-201ENST00000305264 FAM236CP0DP71 79 aa13.65□□□□□ -0.22
HDAC3-201ENST00000305264 C4orf26Q17RF5 130 aa13.64□□□□□ -0.23
HDAC3-201ENST00000305264 KLKP1Q107X0 134 aa13.58□□□□□ -0.24
HDAC3-201ENST00000305264 FLGP20930 4061 aaPredicted RBP13.58□□□□□ -0.24
HDAC3-201ENST00000305264 MT1HP80294 61 aa13.5□□□□□ -0.25
HDAC3-201ENST00000305264 C20orf197Q8N268 126 aa13.49□□□□□ -0.25
HDAC3-201ENST00000305264 SNURFQ9Y675 71 aa13.49□□□□□ -0.25
HDAC3-201ENST00000305264 COX7CP15954 63 aa13.47□□□□□ -0.25
HDAC3-201ENST00000305264 ANAPC13Q9BS18 74 aa13.47□□□□□ -0.25
HDAC3-201ENST00000305264 KRTAP3-1Q9BYR8 98 aa13.47□□□□□ -0.25
HDAC3-201ENST00000305264 LCE2AQ5TA79 106 aaPredicted RBP13.45□□□□□ -0.26
HDAC3-201ENST00000305264 H1FX-AS1Q4G0G2 97 aa13.4□□□□□ -0.26
HDAC3-201ENST00000305264 M0R2T5 61 aa13.29□□□□□ -0.28
HDAC3-201ENST00000305264 CYSTM1Q9H1C7 97 aa13.23□□□□□ -0.29
HDAC3-201ENST00000305264 A8MUN3 132 aa13.21□□□□□ -0.29
HDAC3-201ENST00000305264 CCDC179H3BU77 68 aa13.21□□□□□ -0.29
HDAC3-201ENST00000305264 DMAC1Q96GE9 116 aa13.18□□□□□ -0.3
HDAC3-201ENST00000305264 S4R3F8 94 aa13.17□□□□□ -0.3
HDAC3-201ENST00000305264 LCA10Q71F78 164 aa13.13□□□□□ -0.31
HDAC3-201ENST00000305264 SPANXA2-OT1Q8N9U9 137 aa13.11□□□□□ -0.31
HDAC3-201ENST00000305264 H7BZZ5 65 aa13.11□□□□□ -0.31
HDAC3-201ENST00000305264 NDUFC1O43677 76 aa13.1□□□□□ -0.31
HDAC3-201ENST00000305264 KRTAP10-6P60371 365 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms