RNA–Protein interactions for RNA: ENST00000302909.3

KCNK3-201, Transcript of potassium two pore domain channel subfamily K member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCNK3, Length 6,162 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNK3-201ENST00000302909 NBEAL1Q6ZS30 2694 aa9.29□□□□□ -0.92
KCNK3-201ENST00000302909 P0C880 135 aa9.25□□□□□ -0.93
KCNK3-201ENST00000302909 DMXL2Q8TDJ6 3036 aa9.24□□□□□ -0.93
KCNK3-201ENST00000302909 SEC61BP60468 96 aaKnown RBP9.24□□□□□ -0.93
KCNK3-201ENST00000302909 KRTAP10-8P60410 259 aa9.23□□□□□ -0.93
KCNK3-201ENST00000302909 BAHCC1Q9P281 2608 aa9.22□□□□□ -0.93
KCNK3-201ENST00000302909 APCP25054 2843 aa9.18□□□□□ -0.94
KCNK3-201ENST00000302909 LOC400499M0QZD8 3231 aa9.16□□□□□ -0.94
KCNK3-201ENST00000302909 TEX15Q9BXT5 2789 aa9.15□□□□□ -0.94
KCNK3-201ENST00000302909 RPS29P62273 56 aaKnown RBP9.13□□□□□ -0.95
KCNK3-201ENST00000302909 DMXL1Q9Y485 3027 aa9.13□□□□□ -0.95
KCNK3-201ENST00000302909 ATMQ13315 3056 aa9.12□□□□□ -0.95
KCNK3-201ENST00000302909 LAMA5O15230 3695 aa9.12□□□□□ -0.95
KCNK3-201ENST00000302909 SMG1Q96Q15 3661 aaKnown RBP9.11□□□□□ -0.95
KCNK3-201ENST00000302909 COL12A1Q99715 3063 aa9.1□□□□□ -0.95
KCNK3-201ENST00000302909 TNP1P09430 55 aa9.1□□□□□ -0.95
KCNK3-201ENST00000302909 CFAP46Q8IYW2 2715 aa9.07□□□□□ -0.96
KCNK3-201ENST00000302909 MAST4O15021 2626 aa9.07□□□□□ -0.96
KCNK3-201ENST00000302909 DMDP11532 3685 aa9.06□□□□□ -0.96
KCNK3-201ENST00000302909 HELZ2Q9BYK8 2649 aaKnown RBP9.03□□□□□ -0.96
KCNK3-201ENST00000302909 STAB2Q8WWQ8 2551 aa9.02□□□□□ -0.97
KCNK3-201ENST00000302909 SETXQ7Z333 2677 aaKnown RBP9.01□□□□□ -0.97
KCNK3-201ENST00000302909 NOTCH1P46531 2555 aa8.99□□□□□ -0.97
KCNK3-201ENST00000302909 UBR5O95071 2799 aaPredicted RBP8.98□□□□□ -0.97
KCNK3-201ENST00000302909 TNRC18O15417 2968 aaPredicted RBP8.97□□□□□ -0.97
KCNK3-201ENST00000302909 TPRXLQ17RH7 258 aa8.97□□□□□ -0.97
KCNK3-201ENST00000302909 KRTAP12-2P59991 146 aa8.93□□□□□ -0.98
KCNK3-201ENST00000302909 HIVEP1P15822 2718 aa8.93□□□□□ -0.98
KCNK3-201ENST00000302909 RELNP78509 3460 aa8.92□□□□□ -0.98
KCNK3-201ENST00000302909 KRTAP13-3Q3SY46 172 aa8.92□□□□□ -0.98
KCNK3-201ENST00000302909 SVEP1Q4LDE5 3571 aa8.91□□□□□ -0.98
KCNK3-201ENST00000302909 COL6A5A8TX70 2615 aa8.91□□□□□ -0.98
KCNK3-201ENST00000302909 PP632Q6XCG6 107 aa8.89□□□□□ -0.99
KCNK3-201ENST00000302909 KRTAP1-4P0C5Y4 121 aa8.89□□□□□ -0.99
KCNK3-201ENST00000302909 UTP20O75691 2785 aaKnown RBP8.87□□□□□ -0.99
KCNK3-201ENST00000302909 STAB1Q9NY15 2570 aa8.86□□□□□ -0.99
KCNK3-201ENST00000302909 TEP1Q99973 2627 aaKnown RBP8.86□□□□□ -0.99
KCNK3-201ENST00000302909 A0A1B0GVY2 172 aa8.82□□□□□ -1
KCNK3-201ENST00000302909 ZNF292O60281 2723 aa8.81□□□□□ -1
KCNK3-201ENST00000302909 SPENQ96T58 3664 aaKnown RBP8.8□□□□□ -1
KCNK3-201ENST00000302909 HRNRQ86YZ3 2850 aaPredicted RBP8.8□□□□□ -1
KCNK3-201ENST00000302909 KRTAP21-3Q3LHN1 58 aa8.78□□□□□ -1
KCNK3-201ENST00000302909 XP32Q5T750 250 aa8.78□□□□□ -1
KCNK3-201ENST00000302909 ZFHX3Q15911 3703 aa8.78□□□□□ -1
KCNK3-201ENST00000302909 NSD1Q96L73 2696 aaPredicted RBP8.74□□□□□ -1.01
KCNK3-201ENST00000302909 CUBNO60494 3623 aa8.67□□□□□ -1.02
KCNK3-201ENST00000302909 CELSR2Q9HCU4 2923 aa8.66□□□□□ -1.02
KCNK3-201ENST00000302909 CRYBG3Q68DQ2 2970 aa8.65□□□□□ -1.03
KCNK3-201ENST00000302909 ITPR2Q14571 2701 aa8.61□□□□□ -1.03
KCNK3-201ENST00000302909 FBN2P35556 2912 aa8.61□□□□□ -1.03
KCNK3-201ENST00000302909 IGSF10Q6WRI0 2623 aa8.59□□□□□ -1.03
KCNK3-201ENST00000302909 KRTAP12-1P59990 96 aa8.59□□□□□ -1.03
KCNK3-201ENST00000302909 KRTAP15-1Q3LI76 137 aa8.56□□□□□ -1.04
KCNK3-201ENST00000302909 KRTAP13-4Q3LI77 160 aa8.56□□□□□ -1.04
KCNK3-201ENST00000302909 TGP01266 2768 aa8.54□□□□□ -1.04
KCNK3-201ENST00000302909 KRTAP3-1Q9BYR8 98 aa8.54□□□□□ -1.04
KCNK3-201ENST00000302909 ZANQ9Y493 2812 aa8.5□□□□□ -1.05
KCNK3-201ENST00000302909 DCHS2Q6V1P9 2916 aa8.5□□□□□ -1.05
KCNK3-201ENST00000302909 NF1P21359 2839 aa8.42□□□□□ -1.06
KCNK3-201ENST00000302909 CELSR1Q9NYQ6 3014 aa8.42□□□□□ -1.06
KCNK3-201ENST00000302909 FLNCQ14315 2725 aa8.35□□□□□ -1.07
KCNK3-201ENST00000302909 KMT2BQ9UMN6 2715 aaPredicted RBP8.35□□□□□ -1.07
KCNK3-201ENST00000302909 NBPF19A0A087WUL8 3843 aa8.34□□□□□ -1.07
KCNK3-201ENST00000302909 KRTAP10-6P60371 365 aaPredicted RBP8.31□□□□□ -1.08
KCNK3-201ENST00000302909 MXRA5Q9NR99 2828 aa8.31□□□□□ -1.08
KCNK3-201ENST00000302909 MUC3AQ02505 3323 aa8.26□□□□□ -1.09
KCNK3-201ENST00000302909 KRTAP10-10P60014 251 aa8.22□□□□□ -1.09
KCNK3-201ENST00000302909 VPS13CQ709C8 3753 aa8.22□□□□□ -1.09
KCNK3-201ENST00000302909 NIPBLQ6KC79 2804 aaeCLIP8.18□□□□□ -1.1
KCNK3-201ENST00000302909 CSMD2Q7Z408 3487 aa8.16□□□□□ -1.1
KCNK3-201ENST00000302909 BSNQ9UPA5 3926 aa8.15□□□□□ -1.1
KCNK3-201ENST00000302909 ANK3Q12955 4377 aaKnown RBP8.04□□□□□ -1.12
KCNK3-201ENST00000302909 TENM3Q9P273 2699 aa8.03□□□□□ -1.12
KCNK3-201ENST00000302909 KRTAP3-2Q9BYR7 98 aa8□□□□□ -1.13
KCNK3-201ENST00000302909 PDZD2O15018 2839 aa7.99□□□□□ -1.13
KCNK3-201ENST00000302909 CSMD3Q7Z407 3707 aa7.97□□□□□ -1.13
KCNK3-201ENST00000302909 KRTAP3-3Q9BYR6 98 aa7.96□□□□□ -1.14
KCNK3-201ENST00000302909 PRO2289Q9P1D8 64 aa7.94□□□□□ -1.14
KCNK3-201ENST00000302909 INE1O15225 51 aa7.94□□□□□ -1.14
KCNK3-201ENST00000302909 SRRM2Q9UQ35 2752 aaKnown RBP7.91□□□□□ -1.14
KCNK3-201ENST00000302909 TENM2Q9NT68 2774 aa7.89□□□□□ -1.15
KCNK3-201ENST00000302909 AKAP9Q99996 3911 aa7.88□□□□□ -1.15
KCNK3-201ENST00000302909 TRRAPQ9Y4A5 3859 aa7.84□□□□□ -1.15
KCNK3-201ENST00000302909 TENM1Q9UKZ4 2725 aa7.79□□□□□ -1.16
KCNK3-201ENST00000302909 ALMS1Q8TCU4 4167 aa7.79□□□□□ -1.16
KCNK3-201ENST00000302909 HUWE1Q7Z6Z7 4374 aaKnown RBP7.78□□□□□ -1.16
KCNK3-201ENST00000302909 PKD1L1Q8TDX9 2849 aa7.77□□□□□ -1.17
KCNK3-201ENST00000302909 TENM4Q6N022 2769 aa7.73□□□□□ -1.17
KCNK3-201ENST00000302909 VWFP04275 2813 aa7.64□□□□□ -1.19
KCNK3-201ENST00000302909 MEGF8Q7Z7M0 2845 aa7.63□□□□□ -1.19
KCNK3-201ENST00000302909 FBN3Q75N90 2809 aa7.61□□□□□ -1.19
KCNK3-201ENST00000302909 FBN1P35555 2871 aaKnown RBP7.6□□□□□ -1.19
KCNK3-201ENST00000302909 LORP23490 312 aaPredicted RBP7.56□□□□□ -1.2
KCNK3-201ENST00000302909 CRCT1Q9UGL9 99 aa7.55□□□□□ -1.2
KCNK3-201ENST00000302909 OTOGQ6ZRI0 2925 aa7.55□□□□□ -1.2
KCNK3-201ENST00000302909 COL7A1Q02388 2944 aa7.53□□□□□ -1.2
KCNK3-201ENST00000302909 LCE3AQ5TA76 89 aa7.53□□□□□ -1.2
KCNK3-201ENST00000302909 DNAH10Q8IVF4 4471 aa7.47□□□□□ -1.21
KCNK3-201ENST00000302909 KRTAP10-12P60413 245 aa7.44□□□□□ -1.22
KCNK3-201ENST00000302909 ZNF469Q96JG9 3925 aaPredicted RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms