RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 RPL37P61927 97 aaKnown RBP11.1□□□□□ -0.63
TSR1-201ENST00000301364 DMXL1Q9Y485 3027 aa11.08□□□□□ -0.64
TSR1-201ENST00000301364 RPS29P62273 56 aaKnown RBP11.06□□□□□ -0.64
TSR1-201ENST00000301364 CAMK2N1Q7Z7J9 78 aa11.05□□□□□ -0.64
TSR1-201ENST00000301364 LOC400499M0QZD8 3231 aa11.05□□□□□ -0.64
TSR1-201ENST00000301364 USP34Q70CQ2 3546 aa11.04□□□□□ -0.64
TSR1-201ENST00000301364 LUZP6Q538Z0 58 aa11.02□□□□□ -0.64
TSR1-201ENST00000301364 Q5VSD8 79 aa11.02□□□□□ -0.65
TSR1-201ENST00000301364 A6NN06 94 aa11.01□□□□□ -0.65
TSR1-201ENST00000301364 ROMO1P60602 79 aa11□□□□□ -0.65
TSR1-201ENST00000301364 FLG2Q5D862 2391 aaPredicted RBP11□□□□□ -0.65
TSR1-201ENST00000301364 KRTAP13-2Q52LG2 175 aa10.98□□□□□ -0.65
TSR1-201ENST00000301364 DCHS2Q6V1P9 2916 aa10.97□□□□□ -0.65
TSR1-201ENST00000301364 R4GN34 69 aa10.95□□□□□ -0.66
TSR1-201ENST00000301364 SEC61BP60468 96 aaKnown RBP10.92□□□□□ -0.66
TSR1-201ENST00000301364 NF1P21359 2839 aa10.9□□□□□ -0.66
TSR1-201ENST00000301364 FBN2P35556 2912 aa10.9□□□□□ -0.66
TSR1-201ENST00000301364 A8MU10 97 aa10.83□□□□□ -0.68
TSR1-201ENST00000301364 H3BS24 57 aa10.82□□□□□ -0.68
TSR1-201ENST00000301364 M0QZ58 72 aa10.77□□□□□ -0.69
TSR1-201ENST00000301364 ADM2Q7Z4H4 148 aa10.76□□□□□ -0.69
TSR1-201ENST00000301364 MYO15AQ9UKN7 3530 aa10.76□□□□□ -0.69
TSR1-201ENST00000301364 TENM4Q6N022 2769 aa10.75□□□□□ -0.69
TSR1-201ENST00000301364 MXRA5Q9NR99 2828 aa10.73□□□□□ -0.69
TSR1-201ENST00000301364 M0R2T5 61 aa10.71□□□□□ -0.7
TSR1-201ENST00000301364 CRYBG3Q68DQ2 2970 aa10.69□□□□□ -0.7
TSR1-201ENST00000301364 KRTAP25-1Q3LHN0 102 aa10.68□□□□□ -0.7
TSR1-201ENST00000301364 A8MUU9 505 aa10.65□□□□□ -0.71
TSR1-201ENST00000301364 C20orf166-AS1Q96NR2 134 aa10.62□□□□□ -0.71
TSR1-201ENST00000301364 KRTAP1-4P0C5Y4 121 aa10.55□□□□□ -0.72
TSR1-201ENST00000301364 A0A0A0MQY5 61 aa10.52□□□□□ -0.73
TSR1-201ENST00000301364 RELNP78509 3460 aa10.47□□□□□ -0.73
TSR1-201ENST00000301364 CELSR1Q9NYQ6 3014 aa10.46□□□□□ -0.73
TSR1-201ENST00000301364 TENM3Q9P273 2699 aa10.46□□□□□ -0.74
TSR1-201ENST00000301364 KRTAP21-3Q3LHN1 58 aa10.44□□□□□ -0.74
TSR1-201ENST00000301364 WDFY3Q8IZQ1 3526 aa10.4□□□□□ -0.74
TSR1-201ENST00000301364 KRTAP16-1A8MUX0 517 aa10.4□□□□□ -0.74
TSR1-201ENST00000301364 PLAC4Q8WY50 150 aa10.32□□□□□ -0.76
TSR1-201ENST00000301364 DCHS1Q96JQ0 3298 aa10.31□□□□□ -0.76
TSR1-201ENST00000301364 ZFHX4Q86UP3 3567 aa10.26□□□□□ -0.77
TSR1-201ENST00000301364 KRTAP13-3Q3SY46 172 aa10.25□□□□□ -0.77
TSR1-201ENST00000301364 H0YAA0 97 aa10.24□□□□□ -0.77
TSR1-201ENST00000301364 TENM1Q9UKZ4 2725 aa10.24□□□□□ -0.77
TSR1-201ENST00000301364 XP32Q5T750 250 aa10.21□□□□□ -0.77
TSR1-201ENST00000301364 LAMA5O15230 3695 aa10.21□□□□□ -0.77
TSR1-201ENST00000301364 PDZD2O15018 2839 aa10.19□□□□□ -0.78
TSR1-201ENST00000301364 TGP01266 2768 aa10.17□□□□□ -0.78
TSR1-201ENST00000301364 ASPMQ8IZT6 3477 aa10.15□□□□□ -0.78
TSR1-201ENST00000301364 NDUFAF8A1L188 74 aa10.11□□□□□ -0.79
TSR1-201ENST00000301364 TENM2Q9NT68 2774 aa10.06□□□□□ -0.8
TSR1-201ENST00000301364 CSMD1Q96PZ7 3565 aa10.06□□□□□ -0.8
TSR1-201ENST00000301364 VWFP04275 2813 aa10.04□□□□□ -0.8
TSR1-201ENST00000301364 DMDP11532 3685 aa10.02□□□□□ -0.8
TSR1-201ENST00000301364 SMG1Q96Q15 3661 aaKnown RBP10.01□□□□□ -0.81
TSR1-201ENST00000301364 TNP1P09430 55 aa10.01□□□□□ -0.81
TSR1-201ENST00000301364 TPRXLQ17RH7 258 aa9.99□□□□□ -0.81
TSR1-201ENST00000301364 MUC3AQ02505 3323 aa9.99□□□□□ -0.81
TSR1-201ENST00000301364 C10orf95Q9H7T3 257 aa9.96□□□□□ -0.82
TSR1-201ENST00000301364 PP632Q6XCG6 107 aa9.94□□□□□ -0.82
TSR1-201ENST00000301364 PKD1L1Q8TDX9 2849 aa9.92□□□□□ -0.82
TSR1-201ENST00000301364 FBN1P35555 2871 aaKnown RBP9.91□□□□□ -0.82
TSR1-201ENST00000301364 OTOGQ6ZRI0 2925 aa9.9□□□□□ -0.82
TSR1-201ENST00000301364 P0C880 135 aa9.88□□□□□ -0.83
TSR1-201ENST00000301364 KRTAP10-8P60410 259 aa9.83□□□□□ -0.84
TSR1-201ENST00000301364 A0A1B0GVY2 172 aa9.81□□□□□ -0.84
TSR1-201ENST00000301364 SVEP1Q4LDE5 3571 aa9.75□□□□□ -0.85
TSR1-201ENST00000301364 NBPF19A0A087WUL8 3843 aa9.73□□□□□ -0.85
TSR1-201ENST00000301364 ANK3Q12955 4377 aaKnown RBP9.65□□□□□ -0.86
TSR1-201ENST00000301364 KRTAP3-1Q9BYR8 98 aa9.63□□□□□ -0.87
TSR1-201ENST00000301364 FBN3Q75N90 2809 aa9.58□□□□□ -0.88
TSR1-201ENST00000301364 SPENQ96T58 3664 aaKnown RBP9.56□□□□□ -0.88
TSR1-201ENST00000301364 KRTAP12-2P59991 146 aa9.53□□□□□ -0.88
TSR1-201ENST00000301364 ZFHX3Q15911 3703 aa9.5□□□□□ -0.89
TSR1-201ENST00000301364 CUBNO60494 3623 aa9.47□□□□□ -0.89
TSR1-201ENST00000301364 CSMD2Q7Z408 3487 aa9.46□□□□□ -0.9
TSR1-201ENST00000301364 KRTAP12-1P59990 96 aa9.45□□□□□ -0.9
TSR1-201ENST00000301364 BSNQ9UPA5 3926 aa9.44□□□□□ -0.9
TSR1-201ENST00000301364 SRRM2Q9UQ35 2752 aaKnown RBP9.43□□□□□ -0.9
TSR1-201ENST00000301364 MEGF8Q7Z7M0 2845 aa9.42□□□□□ -0.9
TSR1-201ENST00000301364 TRRAPQ9Y4A5 3859 aa9.41□□□□□ -0.9
TSR1-201ENST00000301364 KRTAP10-10P60014 251 aa9.38□□□□□ -0.91
TSR1-201ENST00000301364 KRTAP10-6P60371 365 aaPredicted RBP9.36□□□□□ -0.91
TSR1-201ENST00000301364 KRTAP13-4Q3LI77 160 aa9.31□□□□□ -0.92
TSR1-201ENST00000301364 PRO2289Q9P1D8 64 aa9.23□□□□□ -0.93
TSR1-201ENST00000301364 COL7A1Q02388 2944 aa9.19□□□□□ -0.94
TSR1-201ENST00000301364 KRTAP3-3Q9BYR6 98 aa9.07□□□□□ -0.96
TSR1-201ENST00000301364 KRTAP3-2Q9BYR7 98 aa9.07□□□□□ -0.96
TSR1-201ENST00000301364 HUWE1Q7Z6Z7 4374 aaKnown RBP9.06□□□□□ -0.96
TSR1-201ENST00000301364 VPS13CQ709C8 3753 aa9.04□□□□□ -0.96
TSR1-201ENST00000301364 MT1HL1P0DM35 61 aa9.03□□□□□ -0.96
TSR1-201ENST00000301364 KRTAP10-4P60372 401 aaPredicted RBP9.03□□□□□ -0.96
TSR1-201ENST00000301364 KRTAP15-1Q3LI76 137 aa8.8□□□□□ -1
TSR1-201ENST00000301364 ZNF469Q96JG9 3925 aaPredicted RBP8.7□□□□□ -1.02
TSR1-201ENST00000301364 DNAH9Q9NYC9 4486 aa8.64□□□□□ -1.03
TSR1-201ENST00000301364 AKAP9Q99996 3911 aa8.63□□□□□ -1.03
TSR1-201ENST00000301364 CSMD3Q7Z407 3707 aa8.57□□□□□ -1.04
TSR1-201ENST00000301364 ALMS1Q8TCU4 4167 aa8.54□□□□□ -1.04
TSR1-201ENST00000301364 KRTAP4-5Q9BYR2 181 aa8.51□□□□□ -1.05
TSR1-201ENST00000301364 DNAH1Q9P2D7 4330 aa8.49□□□□□ -1.05
TSR1-201ENST00000301364 KRTAP23-1A1A580 65 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms