RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 CRYBG3Q68DQ2 2970 aa7.29□□□□□ -1.24
CHRFAM7A-201ENST00000299847 BOD1L1Q8NFC6 3051 aa7.28□□□□□ -1.24
CHRFAM7A-201ENST00000299847 DMXL2Q8TDJ6 3036 aa7.27□□□□□ -1.25
CHRFAM7A-201ENST00000299847 STAB2Q8WWQ8 2551 aa7.25□□□□□ -1.25
CHRFAM7A-201ENST00000299847 IGSF10Q6WRI0 2623 aa7.25□□□□□ -1.25
CHRFAM7A-201ENST00000299847 ITPR2Q14571 2701 aa7.24□□□□□ -1.25
CHRFAM7A-201ENST00000299847 XP32Q5T750 250 aa7.23□□□□□ -1.25
CHRFAM7A-201ENST00000299847 ATMQ13315 3056 aa7.22□□□□□ -1.25
CHRFAM7A-201ENST00000299847 USP34Q70CQ2 3546 aa7.21□□□□□ -1.25
CHRFAM7A-201ENST00000299847 TACC2O95359 2948 aa7.21□□□□□ -1.26
CHRFAM7A-201ENST00000299847 UBR5O95071 2799 aaPredicted RBP7.21□□□□□ -1.26
CHRFAM7A-201ENST00000299847 BAHCC1Q9P281 2608 aa7.2□□□□□ -1.26
CHRFAM7A-201ENST00000299847 ASH1LQ9NR48 2969 aaKnown RBP7.2□□□□□ -1.26
CHRFAM7A-201ENST00000299847 FRYLO94915 3013 aa7.2□□□□□ -1.26
CHRFAM7A-201ENST00000299847 APCP25054 2843 aa7.18□□□□□ -1.26
CHRFAM7A-201ENST00000299847 KRTAP1-4P0C5Y4 121 aa7.17□□□□□ -1.26
CHRFAM7A-201ENST00000299847 H0YAA0 97 aa7.16□□□□□ -1.26
CHRFAM7A-201ENST00000299847 ADGRG4Q8IZF6 3080 aa7.15□□□□□ -1.26
CHRFAM7A-201ENST00000299847 COL12A1Q99715 3063 aa7.15□□□□□ -1.26
CHRFAM7A-201ENST00000299847 HIVEP1P15822 2718 aa7.14□□□□□ -1.27
CHRFAM7A-201ENST00000299847 NSD1Q96L73 2696 aaPredicted RBP7.14□□□□□ -1.27
CHRFAM7A-201ENST00000299847 UTP20O75691 2785 aaKnown RBP7.13□□□□□ -1.27
CHRFAM7A-201ENST00000299847 MYO15AQ9UKN7 3530 aa7.12□□□□□ -1.27
CHRFAM7A-201ENST00000299847 ITPR1Q14643 2758 aa7.11□□□□□ -1.27
CHRFAM7A-201ENST00000299847 KRTAP10-10P60014 251 aa7.09□□□□□ -1.27
CHRFAM7A-201ENST00000299847 EYSQ5T1H1 3165 aa7.07□□□□□ -1.28
CHRFAM7A-201ENST00000299847 ZZEF1O43149 2961 aa7.02□□□□□ -1.29
CHRFAM7A-201ENST00000299847 P0C880 135 aa7.02□□□□□ -1.29
CHRFAM7A-201ENST00000299847 PP632Q6XCG6 107 aa6.98□□□□□ -1.29
CHRFAM7A-201ENST00000299847 ASPMQ8IZT6 3477 aa6.98□□□□□ -1.29
CHRFAM7A-201ENST00000299847 KMT2BQ9UMN6 2715 aaPredicted RBP6.97□□□□□ -1.29
CHRFAM7A-201ENST00000299847 WDFY3Q8IZQ1 3526 aa6.94□□□□□ -1.3
CHRFAM7A-201ENST00000299847 TPRXLQ17RH7 258 aa6.94□□□□□ -1.3
CHRFAM7A-201ENST00000299847 KRTAP21-3Q3LHN1 58 aa6.92□□□□□ -1.3
CHRFAM7A-201ENST00000299847 KRTAP13-3Q3SY46 172 aa6.9□□□□□ -1.3
CHRFAM7A-201ENST00000299847 DCHS1Q96JQ0 3298 aa6.9□□□□□ -1.31
CHRFAM7A-201ENST00000299847 CELSR2Q9HCU4 2923 aa6.89□□□□□ -1.31
CHRFAM7A-201ENST00000299847 LOC400499M0QZD8 3231 aa6.84□□□□□ -1.31
CHRFAM7A-201ENST00000299847 PRO2289Q9P1D8 64 aa6.84□□□□□ -1.31
CHRFAM7A-201ENST00000299847 DMXL1Q9Y485 3027 aa6.83□□□□□ -1.32
CHRFAM7A-201ENST00000299847 TNRC18O15417 2968 aaPredicted RBP6.83□□□□□ -1.32
CHRFAM7A-201ENST00000299847 FLNCQ14315 2725 aa6.81□□□□□ -1.32
CHRFAM7A-201ENST00000299847 KRTAP12-2P59991 146 aa6.81□□□□□ -1.32
CHRFAM7A-201ENST00000299847 ZFHX4Q86UP3 3567 aa6.81□□□□□ -1.32
CHRFAM7A-201ENST00000299847 DCHS2Q6V1P9 2916 aa6.8□□□□□ -1.32
CHRFAM7A-201ENST00000299847 TENM4Q6N022 2769 aa6.76□□□□□ -1.33
CHRFAM7A-201ENST00000299847 CSMD1Q96PZ7 3565 aa6.75□□□□□ -1.33
CHRFAM7A-201ENST00000299847 RELNP78509 3460 aa6.75□□□□□ -1.33
CHRFAM7A-201ENST00000299847 HRNRQ86YZ3 2850 aaPredicted RBP6.72□□□□□ -1.33
CHRFAM7A-201ENST00000299847 NBPF19A0A087WUL8 3843 aa6.72□□□□□ -1.33
CHRFAM7A-201ENST00000299847 LAMA5O15230 3695 aa6.66□□□□□ -1.34
CHRFAM7A-201ENST00000299847 FBN2P35556 2912 aa6.66□□□□□ -1.34
CHRFAM7A-201ENST00000299847 CELSR1Q9NYQ6 3014 aa6.66□□□□□ -1.34
CHRFAM7A-201ENST00000299847 ZANQ9Y493 2812 aa6.65□□□□□ -1.34
CHRFAM7A-201ENST00000299847 TENM2Q9NT68 2774 aa6.64□□□□□ -1.35
CHRFAM7A-201ENST00000299847 NIPBLQ6KC79 2804 aaeCLIP6.6□□□□□ -1.35
CHRFAM7A-201ENST00000299847 TGP01266 2768 aa6.58□□□□□ -1.36
CHRFAM7A-201ENST00000299847 NF1P21359 2839 aa6.57□□□□□ -1.36
CHRFAM7A-201ENST00000299847 TENM1Q9UKZ4 2725 aa6.57□□□□□ -1.36
CHRFAM7A-201ENST00000299847 KRTAP12-1P59990 96 aa6.56□□□□□ -1.36
CHRFAM7A-201ENST00000299847 KRTAP13-4Q3LI77 160 aa6.54□□□□□ -1.36
CHRFAM7A-201ENST00000299847 SMG1Q96Q15 3661 aaKnown RBP6.51□□□□□ -1.37
CHRFAM7A-201ENST00000299847 KRTAP3-1Q9BYR8 98 aa6.5□□□□□ -1.37
CHRFAM7A-201ENST00000299847 DMDP11532 3685 aa6.46□□□□□ -1.38
CHRFAM7A-201ENST00000299847 KRTAP15-1Q3LI76 137 aa6.46□□□□□ -1.38
CHRFAM7A-201ENST00000299847 SVEP1Q4LDE5 3571 aa6.42□□□□□ -1.38
CHRFAM7A-201ENST00000299847 MXRA5Q9NR99 2828 aa6.37□□□□□ -1.39
CHRFAM7A-201ENST00000299847 TENM3Q9P273 2699 aa6.36□□□□□ -1.39
CHRFAM7A-201ENST00000299847 CRCT1Q9UGL9 99 aa6.36□□□□□ -1.39
CHRFAM7A-201ENST00000299847 SPENQ96T58 3664 aaKnown RBP6.34□□□□□ -1.39
CHRFAM7A-201ENST00000299847 VWFP04275 2813 aa6.34□□□□□ -1.4
CHRFAM7A-201ENST00000299847 PKD1L1Q8TDX9 2849 aa6.34□□□□□ -1.4
CHRFAM7A-201ENST00000299847 ANK3Q12955 4377 aaKnown RBP6.32□□□□□ -1.4
CHRFAM7A-201ENST00000299847 CUBNO60494 3623 aa6.28□□□□□ -1.4
CHRFAM7A-201ENST00000299847 KRTAP10-6P60371 365 aaPredicted RBP6.28□□□□□ -1.4
CHRFAM7A-201ENST00000299847 ZFHX3Q15911 3703 aa6.26□□□□□ -1.41
CHRFAM7A-201ENST00000299847 CSMD2Q7Z408 3487 aa6.23□□□□□ -1.41
CHRFAM7A-201ENST00000299847 PDZD2O15018 2839 aa6.19□□□□□ -1.42
CHRFAM7A-201ENST00000299847 KRTAP4-5Q9BYR2 181 aa6.09□□□□□ -1.43
CHRFAM7A-201ENST00000299847 HUWE1Q7Z6Z7 4374 aaKnown RBP6.09□□□□□ -1.43
CHRFAM7A-201ENST00000299847 TRRAPQ9Y4A5 3859 aa6.09□□□□□ -1.44
CHRFAM7A-201ENST00000299847 KRTAP10-12P60413 245 aa6.08□□□□□ -1.44
CHRFAM7A-201ENST00000299847 MT1HL1P0DM35 61 aa6.08□□□□□ -1.44
CHRFAM7A-201ENST00000299847 KRTAP3-3Q9BYR6 98 aa6.05□□□□□ -1.44
CHRFAM7A-201ENST00000299847 KRTAP3-2Q9BYR7 98 aa6.03□□□□□ -1.44
CHRFAM7A-201ENST00000299847 FBN1P35555 2871 aaKnown RBP6.02□□□□□ -1.45
CHRFAM7A-201ENST00000299847 VPS13CQ709C8 3753 aa6.01□□□□□ -1.45
CHRFAM7A-201ENST00000299847 BSNQ9UPA5 3926 aa6.01□□□□□ -1.45
CHRFAM7A-201ENST00000299847 MUC3AQ02505 3323 aa6□□□□□ -1.45
CHRFAM7A-201ENST00000299847 SRRM2Q9UQ35 2752 aaKnown RBP5.99□□□□□ -1.45
CHRFAM7A-201ENST00000299847 FBN3Q75N90 2809 aa5.97□□□□□ -1.45
CHRFAM7A-201ENST00000299847 MEGF8Q7Z7M0 2845 aa5.96□□□□□ -1.46
CHRFAM7A-201ENST00000299847 LCE3AQ5TA76 89 aa5.93□□□□□ -1.46
CHRFAM7A-201ENST00000299847 OTOGQ6ZRI0 2925 aa5.92□□□□□ -1.46
CHRFAM7A-201ENST00000299847 CSMD3Q7Z407 3707 aa5.92□□□□□ -1.46
CHRFAM7A-201ENST00000299847 LORP23490 312 aaPredicted RBP5.89□□□□□ -1.47
CHRFAM7A-201ENST00000299847 KRTAP12-3P60328 96 aa5.88□□□□□ -1.47
CHRFAM7A-201ENST00000299847 ALMS1Q8TCU4 4167 aa5.87□□□□□ -1.47
CHRFAM7A-201ENST00000299847 INE1O15225 51 aa5.86□□□□□ -1.47
CHRFAM7A-201ENST00000299847 KRTAP10-4P60372 401 aaPredicted RBP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms