RNA–Protein interactions for RNA: ENST00000299440.5

RAG1-201, Transcript of recombination activating 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAG1, Length 6,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-201ENST00000299440 TNRC18O15417 2968 aaPredicted RBP3.96□□□□□ -1.78
RAG1-201ENST00000299440 KRTAP7-1Q8IUC3 87 aa3.96□□□□□ -1.78
RAG1-201ENST00000299440 LINC01558Q9Y6Z2 57 aa3.94□□□□□ -1.78
RAG1-201ENST00000299440 TENM2Q9NT68 2774 aa3.94□□□□□ -1.78
RAG1-201ENST00000299440 KRTAP10-10P60014 251 aa3.94□□□□□ -1.78
RAG1-201ENST00000299440 ASH1LQ9NR48 2969 aaKnown RBP3.93□□□□□ -1.78
RAG1-201ENST00000299440 KALRNO60229 2985 aa3.93□□□□□ -1.78
RAG1-201ENST00000299440 CELSR2Q9HCU4 2923 aa3.93□□□□□ -1.78
RAG1-201ENST00000299440 ASB16-AS1Q495Z4 193 aa3.93□□□□□ -1.78
RAG1-201ENST00000299440 ZZEF1O43149 2961 aa3.92□□□□□ -1.78
RAG1-201ENST00000299440 ROMO1P60602 79 aa3.91□□□□□ -1.78
RAG1-201ENST00000299440 KRTAP10-8P60410 259 aa3.91□□□□□ -1.78
RAG1-201ENST00000299440 XP32Q5T750 250 aa3.91□□□□□ -1.78
RAG1-201ENST00000299440 KRTAP13-1Q8IUC0 172 aa3.91□□□□□ -1.78
RAG1-201ENST00000299440 TENM1Q9UKZ4 2725 aa3.9□□□□□ -1.79
RAG1-201ENST00000299440 DCHS2Q6V1P9 2916 aa3.9□□□□□ -1.79
RAG1-201ENST00000299440 NIPBLQ6KC79 2804 aaeCLIP3.89□□□□□ -1.79
RAG1-201ENST00000299440 SPEGQ15772 3267 aa3.89□□□□□ -1.79
RAG1-201ENST00000299440 ADGRG4Q8IZF6 3080 aa3.89□□□□□ -1.79
RAG1-201ENST00000299440 TENM3Q9P273 2699 aa3.88□□□□□ -1.79
RAG1-201ENST00000299440 PRAC1Q96KF2 57 aa3.87□□□□□ -1.79
RAG1-201ENST00000299440 KRTAP29-1A8MX34 341 aaPredicted RBP3.86□□□□□ -1.79
RAG1-201ENST00000299440 DMXL1Q9Y485 3027 aa3.86□□□□□ -1.79
RAG1-201ENST00000299440 TPRXLQ17RH7 258 aa3.86□□□□□ -1.79
RAG1-201ENST00000299440 NF1P21359 2839 aa3.85□□□□□ -1.79
RAG1-201ENST00000299440 A8MU10 97 aa3.85□□□□□ -1.79
RAG1-201ENST00000299440 USP34Q70CQ2 3546 aa3.85□□□□□ -1.79
RAG1-201ENST00000299440 H3BS24 57 aa3.85□□□□□ -1.79
RAG1-201ENST00000299440 KRTAP1-4P0C5Y4 121 aa3.85□□□□□ -1.79
RAG1-201ENST00000299440 Q5VV11 94 aa3.85□□□□□ -1.79
RAG1-201ENST00000299440 PKD1L1Q8TDX9 2849 aa3.84□□□□□ -1.79
RAG1-201ENST00000299440 DNAH14Q0VDD8 3507 aa3.83□□□□□ -1.8
RAG1-201ENST00000299440 TNP1P09430 55 aa3.83□□□□□ -1.8
RAG1-201ENST00000299440 SPTBN5Q9NRC6 3674 aaKnown RBP3.81□□□□□ -1.8
RAG1-201ENST00000299440 ZANQ9Y493 2812 aa3.8□□□□□ -1.8
RAG1-201ENST00000299440 A0A0A0MQY5 61 aa3.78□□□□□ -1.8
RAG1-201ENST00000299440 PRO2289Q9P1D8 64 aa3.78□□□□□ -1.8
RAG1-201ENST00000299440 KRTAP13-3Q3SY46 172 aa3.76□□□□□ -1.81
RAG1-201ENST00000299440 VWFP04275 2813 aa3.75□□□□□ -1.81
RAG1-201ENST00000299440 A6NN06 94 aa3.74□□□□□ -1.81
RAG1-201ENST00000299440 MXRA5Q9NR99 2828 aa3.72□□□□□ -1.81
RAG1-201ENST00000299440 C10orf95Q9H7T3 257 aa3.7□□□□□ -1.82
RAG1-201ENST00000299440 DCHS1Q96JQ0 3298 aa3.69□□□□□ -1.82
RAG1-201ENST00000299440 MYO15AQ9UKN7 3530 aa3.69□□□□□ -1.82
RAG1-201ENST00000299440 FBN2P35556 2912 aa3.68□□□□□ -1.82
RAG1-201ENST00000299440 CELSR1Q9NYQ6 3014 aa3.68□□□□□ -1.82
RAG1-201ENST00000299440 NBPF19A0A087WUL8 3843 aa3.66□□□□□ -1.82
RAG1-201ENST00000299440 HRNRQ86YZ3 2850 aaPredicted RBP3.65□□□□□ -1.83
RAG1-201ENST00000299440 LOC400499M0QZD8 3231 aa3.64□□□□□ -1.83
RAG1-201ENST00000299440 ZFHX3Q15911 3703 aa3.63□□□□□ -1.83
RAG1-201ENST00000299440 PDZD2O15018 2839 aa3.62□□□□□ -1.83
RAG1-201ENST00000299440 SRRM2Q9UQ35 2752 aaKnown RBP3.62□□□□□ -1.83
RAG1-201ENST00000299440 RELNP78509 3460 aa3.61□□□□□ -1.83
RAG1-201ENST00000299440 WDFY3Q8IZQ1 3526 aa3.57□□□□□ -1.84
RAG1-201ENST00000299440 TGP01266 2768 aa3.57□□□□□ -1.84
RAG1-201ENST00000299440 KRTAP16-1A8MUX0 517 aa3.57□□□□□ -1.84
RAG1-201ENST00000299440 P0C880 135 aa3.57□□□□□ -1.84
RAG1-201ENST00000299440 KRTAP25-1Q3LHN0 102 aa3.56□□□□□ -1.84
RAG1-201ENST00000299440 FBN3Q75N90 2809 aa3.55□□□□□ -1.84
RAG1-201ENST00000299440 OTOGQ6ZRI0 2925 aa3.53□□□□□ -1.84
RAG1-201ENST00000299440 FBN1P35555 2871 aaKnown RBP3.53□□□□□ -1.84
RAG1-201ENST00000299440 PP632Q6XCG6 107 aa3.53□□□□□ -1.84
RAG1-201ENST00000299440 KRTAP4-5Q9BYR2 181 aa3.53□□□□□ -1.84
RAG1-201ENST00000299440 ASPMQ8IZT6 3477 aa3.53□□□□□ -1.85
RAG1-201ENST00000299440 NDUFAF8A1L188 74 aa3.49□□□□□ -1.85
RAG1-201ENST00000299440 LAMA5O15230 3695 aa3.48□□□□□ -1.85
RAG1-201ENST00000299440 H0YAA0 97 aa3.45□□□□□ -1.86
RAG1-201ENST00000299440 ZFHX4Q86UP3 3567 aa3.45□□□□□ -1.86
RAG1-201ENST00000299440 MT1HL1P0DM35 61 aa3.43□□□□□ -1.86
RAG1-201ENST00000299440 CRCT1Q9UGL9 99 aa3.39□□□□□ -1.87
RAG1-201ENST00000299440 CSMD2Q7Z408 3487 aa3.39□□□□□ -1.87
RAG1-201ENST00000299440 ANK3Q12955 4377 aaKnown RBP3.38□□□□□ -1.87
RAG1-201ENST00000299440 CSMD1Q96PZ7 3565 aa3.37□□□□□ -1.87
RAG1-201ENST00000299440 SMG1Q96Q15 3661 aaKnown RBP3.35□□□□□ -1.87
RAG1-201ENST00000299440 KRTAP12-2P59991 146 aa3.35□□□□□ -1.87
RAG1-201ENST00000299440 COL7A1Q02388 2944 aa3.33□□□□□ -1.88
RAG1-201ENST00000299440 KRTAP15-1Q3LI76 137 aa3.32□□□□□ -1.88
RAG1-201ENST00000299440 MUC3AQ02505 3323 aa3.32□□□□□ -1.88
RAG1-201ENST00000299440 DMDP11532 3685 aa3.32□□□□□ -1.88
RAG1-201ENST00000299440 LORP23490 312 aaPredicted RBP3.29□□□□□ -1.88
RAG1-201ENST00000299440 KRTAP13-4Q3LI77 160 aa3.29□□□□□ -1.88
RAG1-201ENST00000299440 TRRAPQ9Y4A5 3859 aa3.27□□□□□ -1.89
RAG1-201ENST00000299440 KRTAP3-1Q9BYR8 98 aa3.26□□□□□ -1.89
RAG1-201ENST00000299440 KRTAP12-1P59990 96 aa3.25□□□□□ -1.89
RAG1-201ENST00000299440 MEGF8Q7Z7M0 2845 aa3.25□□□□□ -1.89
RAG1-201ENST00000299440 KRTAP10-4P60372 401 aaPredicted RBP3.22□□□□□ -1.89
RAG1-201ENST00000299440 KRTAP10-12P60413 245 aa3.22□□□□□ -1.89
RAG1-201ENST00000299440 HUWE1Q7Z6Z7 4374 aaKnown RBP3.19□□□□□ -1.9
RAG1-201ENST00000299440 CUBNO60494 3623 aa3.18□□□□□ -1.9
RAG1-201ENST00000299440 ALMS1Q8TCU4 4167 aa3.18□□□□□ -1.9
RAG1-201ENST00000299440 KRTAP8-1Q8IUC2 63 aa3.17□□□□□ -1.9
RAG1-201ENST00000299440 SVEP1Q4LDE5 3571 aa3.16□□□□□ -1.9
RAG1-201ENST00000299440 SPENQ96T58 3664 aaKnown RBP3.14□□□□□ -1.91
RAG1-201ENST00000299440 KRTAP10-6P60371 365 aaPredicted RBP3.12□□□□□ -1.91
RAG1-201ENST00000299440 DNHD1Q96M86 4753 aa3.1□□□□□ -1.91
RAG1-201ENST00000299440 KRTAP12-3P60328 96 aa3.05□□□□□ -1.92
RAG1-201ENST00000299440 DNAH5Q8TE73 4624 aa3.05□□□□□ -1.92
RAG1-201ENST00000299440 MT1HP80294 61 aa3.05□□□□□ -1.92
RAG1-201ENST00000299440 KRTAP3-3Q9BYR6 98 aa3.04□□□□□ -1.92
RAG1-201ENST00000299440 DNAH9Q9NYC9 4486 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms