RNA–Protein interactions for RNA: ENST00000297157.7

RP9-201, Transcript of RP9, pre-mRNA splicing factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RP9, Length 1,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RP9-201ENST00000297157 ATP11AUNQ6ZP68 121 aa13.32□□□□□ -0.28
RP9-201ENST00000297157 DSCR10P59022 87 aa13.31□□□□□ -0.28
RP9-201ENST00000297157 Q6ZQT0 140 aa13.31□□□□□ -0.28
RP9-201ENST00000297157 VPS25Q9BRG1 176 aa13.29□□□□□ -0.28
RP9-201ENST00000297157 A0A1B0GW54 56 aa13.28□□□□□ -0.28
RP9-201ENST00000297157 DEFB116Q30KQ4 102 aa13.28□□□□□ -0.28
RP9-201ENST00000297157 LINC00313P59037 77 aa13.27□□□□□ -0.29
RP9-201ENST00000297157 NOTCH2NLQ7Z3S9 236 aa13.27□□□□□ -0.29
RP9-201ENST00000297157 PDE6GP18545 87 aa13.25□□□□□ -0.29
RP9-201ENST00000297157 A0A1W2PPM0 123 aa13.24□□□□□ -0.29
RP9-201ENST00000297157 J3KT08 172 aa13.19□□□□□ -0.3
RP9-201ENST00000297157 C14orf132Q9NPU4 83 aa13.19□□□□□ -0.3
RP9-201ENST00000297157 A0A1B0GVX0 72 aa13.18□□□□□ -0.3
RP9-201ENST00000297157 H3BT86 120 aa13.18□□□□□ -0.3
RP9-201ENST00000297157 IGHV6-1A0A0B4J1U7 121 aa13.16□□□□□ -0.3
RP9-201ENST00000297157 C8orf87E5RJ46 101 aa13.15□□□□□ -0.3
RP9-201ENST00000297157 MTURNQ8N3F0 131 aa13.06□□□□□ -0.32
RP9-201ENST00000297157 A8MWP4 228 aa13.04□□□□□ -0.32
RP9-201ENST00000297157 COL5A1-AS1Q5SY13 56 aa13.03□□□□□ -0.32
RP9-201ENST00000297157 SPCS1Q9Y6A9 102 aa13.03□□□□□ -0.32
RP9-201ENST00000297157 IGKV3D-7A0A0C4DH55 119 aa13□□□□□ -0.33
RP9-201ENST00000297157 NDUFB1O75438 58 aa13□□□□□ -0.33
RP9-201ENST00000297157 SMCPP49901 116 aaPredicted RBP12.99□□□□□ -0.33
RP9-201ENST00000297157 Q8N9P0 234 aaPredicted RBP12.99□□□□□ -0.33
RP9-201ENST00000297157 NREPQ16612 68 aa12.97□□□□□ -0.33
RP9-201ENST00000297157 KRTAP9-8Q9BYQ0 159 aa12.97□□□□□ -0.33
RP9-201ENST00000297157 USH2AO75445 5202 aa12.97□□□□□ -0.33
RP9-201ENST00000297157 C8orf17Q9NRJ1 99 aa12.96□□□□□ -0.33
RP9-201ENST00000297157 SSPOA2VEC9 5147 aa12.96□□□□□ -0.34
RP9-201ENST00000297157 PRO0461Q9UI25 63 aa12.95□□□□□ -0.34
RP9-201ENST00000297157 PRR15Q8IV56 129 aa12.94□□□□□ -0.34
RP9-201ENST00000297157 MPLKIPQ8TAP9 179 aa12.94□□□□□ -0.34
RP9-201ENST00000297157 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.92□□□□□ -0.34
RP9-201ENST00000297157 ZCCHC13Q8WW36 166 aaKnown RBP12.9□□□□□ -0.34
RP9-201ENST00000297157 K7EP34 96 aa12.89□□□□□ -0.35
RP9-201ENST00000297157 HRES1P13985 223 aa12.89□□□□□ -0.35
RP9-201ENST00000297157 KRTAP9-7A8MTY7 169 aa12.87□□□□□ -0.35
RP9-201ENST00000297157 MMP24-AS1A0A0U1RRL7 71 aa12.84□□□□□ -0.35
RP9-201ENST00000297157 Q6ZVQ6 151 aa12.84□□□□□ -0.35
RP9-201ENST00000297157 K7EQZ3 153 aa12.8□□□□□ -0.36
RP9-201ENST00000297157 TMEM254Q8TBM7 123 aa12.78□□□□□ -0.36
RP9-201ENST00000297157 BPY2O14599 106 aa12.75□□□□□ -0.37
RP9-201ENST00000297157 MRPL34Q9BQ48 92 aaKnown RBP12.75□□□□□ -0.37
RP9-201ENST00000297157 SPINK7P58062 85 aa12.74□□□□□ -0.37
RP9-201ENST00000297157 PCP4L1A6NKN8 68 aa12.73□□□□□ -0.37
RP9-201ENST00000297157 MT2AP02795 61 aa12.73□□□□□ -0.37
RP9-201ENST00000297157 RBM12B-AS1Q9P1G2 102 aa12.71□□□□□ -0.37
RP9-201ENST00000297157 FCGBPQ9Y6R7 5405 aaPredicted RBP12.7□□□□□ -0.38
RP9-201ENST00000297157 hDV103S1A0JD37 113 aa12.7□□□□□ -0.38
RP9-201ENST00000297157 GTF2H5Q6ZYL4 71 aa12.7□□□□□ -0.38
RP9-201ENST00000297157 LINC00846Q9NV44 126 aa12.69□□□□□ -0.38
RP9-201ENST00000297157 F8W1H4 67 aa12.66□□□□□ -0.38
RP9-201ENST00000297157 MT1FP04733 61 aa12.63□□□□□ -0.39
RP9-201ENST00000297157 FAM236DA0A1B0GTK5 79 aa12.62□□□□□ -0.39
RP9-201ENST00000297157 FAM236CP0DP71 79 aa12.62□□□□□ -0.39
RP9-201ENST00000297157 Q8N9L7 120 aa12.62□□□□□ -0.39
RP9-201ENST00000297157 LCE2BO14633 110 aa12.61□□□□□ -0.39
RP9-201ENST00000297157 UBL5Q9BZL1 73 aa12.59□□□□□ -0.39
RP9-201ENST00000297157 KRTAP9-3Q9BYQ3 159 aa12.57□□□□□ -0.4
RP9-201ENST00000297157 ETDBQ3ZM63 59 aa12.56□□□□□ -0.4
RP9-201ENST00000297157 KRTAP19-1Q8IUB9 90 aa12.56□□□□□ -0.4
RP9-201ENST00000297157 CASC2Q6XLA1 102 aa12.53□□□□□ -0.4
RP9-201ENST00000297157 Q5W150 140 aa12.52□□□□□ -0.41
RP9-201ENST00000297157 WFDC13Q8IUB5 93 aa12.51□□□□□ -0.41
RP9-201ENST00000297157 NDUFS5O43920 106 aa12.5□□□□□ -0.41
RP9-201ENST00000297157 KRTAP10-10P60014 251 aa12.49□□□□□ -0.41
RP9-201ENST00000297157 HCG22E2RYF7 251 aa12.43□□□□□ -0.42
RP9-201ENST00000297157 MACF1Q9UPN3 7388 aaKnown RBP12.43□□□□□ -0.42
RP9-201ENST00000297157 CXCL6P80162 114 aa12.42□□□□□ -0.42
RP9-201ENST00000297157 C7orf65Q6ZTY9 151 aa12.36□□□□□ -0.43
RP9-201ENST00000297157 SYNE2Q8WXH0 6885 aaKnown RBP12.35□□□□□ -0.43
RP9-201ENST00000297157 IGKV2D-30A0A075B6S6 120 aa12.32□□□□□ -0.44
RP9-201ENST00000297157 IGKV2-30P06310 120 aa12.32□□□□□ -0.44
RP9-201ENST00000297157 FAM240AA0A1B0GVK7 77 aa12.29□□□□□ -0.44
RP9-201ENST00000297157 ACYP1P07311 99 aa12.29□□□□□ -0.44
RP9-201ENST00000297157 H1FX-AS1Q4G0G2 97 aa12.27□□□□□ -0.45
RP9-201ENST00000297157 KRTAP19-6Q3LI70 58 aa12.26□□□□□ -0.45
RP9-201ENST00000297157 TP53AIP1Q9HCN2 124 aa12.22□□□□□ -0.45
RP9-201ENST00000297157 ATP5EP2Q5VTU8 51 aa12.15□□□□□ -0.46
RP9-201ENST00000297157 C4orf26Q17RF5 130 aa12.14□□□□□ -0.47
RP9-201ENST00000297157 A0A1B0GV90 55 aa12.12□□□□□ -0.47
RP9-201ENST00000297157 KRTAP3-1Q9BYR8 98 aa12.1□□□□□ -0.47
RP9-201ENST00000297157 LINC00643Q86TS7 51 aa12□□□□□ -0.49
RP9-201ENST00000297157 CYP4F30PQ9H0H9 118 aa11.97□□□□□ -0.49
RP9-201ENST00000297157 TRAV22A0A0B4J277 110 aa11.95□□□□□ -0.5
RP9-201ENST00000297157 HIST1H4AP62805 103 aaKnown RBP11.94□□□□□ -0.5
RP9-201ENST00000297157 C1orf64Q8NEQ6 169 aa11.94□□□□□ -0.5
RP9-201ENST00000297157 KRTAP6-3Q3LI67 103 aa11.93□□□□□ -0.5
RP9-201ENST00000297157 A0A087WVE0 104 aa11.88□□□□□ -0.51
RP9-201ENST00000297157 LOC101927531A0A1B0GV80 90 aa11.88□□□□□ -0.51
RP9-201ENST00000297157 UQCRQO14949 82 aa11.88□□□□□ -0.51
RP9-201ENST00000297157 S4R3F8 94 aa11.83□□□□□ -0.52
RP9-201ENST00000297157 LCA10Q71F78 164 aa11.8□□□□□ -0.52
RP9-201ENST00000297157 C5orf47Q569G3 176 aa11.79□□□□□ -0.52
RP9-201ENST00000297157 ATOX1O00244 68 aa11.78□□□□□ -0.52
RP9-201ENST00000297157 H0Y9P7 68 aa11.76□□□□□ -0.53
RP9-201ENST00000297157 J3QR89 54 aa11.75□□□□□ -0.53
RP9-201ENST00000297157 KRTAP3-3Q9BYR6 98 aa11.75□□□□□ -0.53
RP9-201ENST00000297157 CSAG1Q6PB30 78 aa11.74□□□□□ -0.53
RP9-201ENST00000297157 OCR1Q9BZK8 76 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms