RNA–Protein interactions for RNA: ENST00000296875.3

GDF9-201, Transcript of growth differentiation factor 9, humanhuman

TSL 5 BASIC

Gene GDF9, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9-201ENST00000296875 Q6ZSA8 131 aa8.66□□□□□ -1.02
GDF9-201ENST00000296875 IGHV6-1A0A0B4J1U7 121 aa8.66□□□□□ -1.02
GDF9-201ENST00000296875 FAM229BQ4G0N7 80 aa8.66□□□□□ -1.02
GDF9-201ENST00000296875 PKHD1P08F94 4074 aa8.65□□□□□ -1.02
GDF9-201ENST00000296875 DNAH8Q96JB1 4490 aa8.64□□□□□ -1.03
GDF9-201ENST00000296875 MRPL34Q9BQ48 92 aaKnown RBP8.64□□□□□ -1.03
GDF9-201ENST00000296875 C8orf87E5RJ46 101 aa8.63□□□□□ -1.03
GDF9-201ENST00000296875 C4orf26Q17RF5 130 aa8.63□□□□□ -1.03
GDF9-201ENST00000296875 ANAPC11Q9NYG5 84 aa8.63□□□□□ -1.03
GDF9-201ENST00000296875 NDUFS5O43920 106 aa8.61□□□□□ -1.03
GDF9-201ENST00000296875 FP248Q71RG6 208 aaPredicted RBP8.61□□□□□ -1.03
GDF9-201ENST00000296875 LINC00336Q6ZUF6 198 aa8.6□□□□□ -1.03
GDF9-201ENST00000296875 A0A1B0GVY2 172 aa8.59□□□□□ -1.03
GDF9-201ENST00000296875 V9GYY9 64 aa8.59□□□□□ -1.03
GDF9-201ENST00000296875 LIMD2Q9BT23 127 aa8.58□□□□□ -1.04
GDF9-201ENST00000296875 KRTAP3-3Q9BYR6 98 aa8.58□□□□□ -1.04
GDF9-201ENST00000296875 KRTAP3-2Q9BYR7 98 aa8.58□□□□□ -1.04
GDF9-201ENST00000296875 KRTAP10-1P60331 282 aa8.56□□□□□ -1.04
GDF9-201ENST00000296875 SPINK6Q6UWN8 80 aa8.55□□□□□ -1.04
GDF9-201ENST00000296875 LRP1BQ9NZR2 4599 aa8.54□□□□□ -1.04
GDF9-201ENST00000296875 IGLV7-46A0A075B6I9 117 aa8.53□□□□□ -1.04
GDF9-201ENST00000296875 Q1T7F1 81 aa8.53□□□□□ -1.04
GDF9-201ENST00000296875 DYNC1H1Q14204 4646 aaKnown RBP8.53□□□□□ -1.04
GDF9-201ENST00000296875 LOC101927531A0A1B0GV80 90 aa8.53□□□□□ -1.04
GDF9-201ENST00000296875 MPLKIPQ8TAP9 179 aa8.52□□□□□ -1.05
GDF9-201ENST00000296875 SRRM2Q9UQ35 2752 aaKnown RBP8.51□□□□□ -1.05
GDF9-201ENST00000296875 PRR4Q16378 134 aa8.5□□□□□ -1.05
GDF9-201ENST00000296875 C4orf48Q5BLP8 95 aa8.5□□□□□ -1.05
GDF9-201ENST00000296875 C1orf195Q5TG92 126 aa8.5□□□□□ -1.05
GDF9-201ENST00000296875 HERC2O95714 4834 aa8.5□□□□□ -1.05
GDF9-201ENST00000296875 LINC00313P59037 77 aa8.48□□□□□ -1.05
GDF9-201ENST00000296875 KIAA1109Q2LD37 5005 aa8.48□□□□□ -1.05
GDF9-201ENST00000296875 A0A087X002 238 aa8.46□□□□□ -1.05
GDF9-201ENST00000296875 FAM229AH3BQW9 127 aa8.45□□□□□ -1.06
GDF9-201ENST00000296875 KRTAP13-2Q52LG2 175 aa8.45□□□□□ -1.06
GDF9-201ENST00000296875 PRO0628Q9UI54 55 aa8.45□□□□□ -1.06
GDF9-201ENST00000296875 SPINK1P00995 79 aa8.44□□□□□ -1.06
GDF9-201ENST00000296875 APOBP04114 4563 aaKnown RBP8.44□□□□□ -1.06
GDF9-201ENST00000296875 PCOTHQ58A44 107 aa8.43□□□□□ -1.06
GDF9-201ENST00000296875 TYMSOSQ8TAI1 123 aa8.43□□□□□ -1.06
GDF9-201ENST00000296875 PLA2G1BP04054 148 aaKnown RBP8.42□□□□□ -1.06
GDF9-201ENST00000296875 NOTCH2NLQ7Z3S9 236 aa8.42□□□□□ -1.06
GDF9-201ENST00000296875 KRTAP1-4P0C5Y4 121 aa8.41□□□□□ -1.06
GDF9-201ENST00000296875 RPS29P62273 56 aaKnown RBP8.41□□□□□ -1.06
GDF9-201ENST00000296875 SPAG11AQ6PDA7 123 aa8.4□□□□□ -1.06
GDF9-201ENST00000296875 PCLOQ9Y6V0 5065 aa8.4□□□□□ -1.06
GDF9-201ENST00000296875 COA5Q86WW8 74 aa8.4□□□□□ -1.07
GDF9-201ENST00000296875 Q8N9P0 234 aaPredicted RBP8.4□□□□□ -1.07
GDF9-201ENST00000296875 VPS13BQ7Z7G8 4022 aa8.38□□□□□ -1.07
GDF9-201ENST00000296875 KRTAP17-1Q9BYP8 105 aa8.38□□□□□ -1.07
GDF9-201ENST00000296875 KRTAP13-3Q3SY46 172 aa8.35□□□□□ -1.07
GDF9-201ENST00000296875 BRK1Q8WUW1 75 aa8.35□□□□□ -1.07
GDF9-201ENST00000296875 Q5W150 140 aa8.32□□□□□ -1.08
GDF9-201ENST00000296875 RYR1P21817 5038 aa8.31□□□□□ -1.08
GDF9-201ENST00000296875 ACYP2P14621 99 aa8.31□□□□□ -1.08
GDF9-201ENST00000296875 LINC00304Q8N9R0 145 aa8.31□□□□□ -1.08
GDF9-201ENST00000296875 HSPG2P98160 4391 aa8.3□□□□□ -1.08
GDF9-201ENST00000296875 FAT1Q14517 4588 aa8.3□□□□□ -1.08
GDF9-201ENST00000296875 PSPHP1O15172 72 aa8.29□□□□□ -1.08
GDF9-201ENST00000296875 KRTAP16-1A8MUX0 517 aa8.27□□□□□ -1.09
GDF9-201ENST00000296875 IGKV2-30P06310 120 aa8.27□□□□□ -1.09
GDF9-201ENST00000296875 ABCA13Q86UQ4 5058 aa8.26□□□□□ -1.09
GDF9-201ENST00000296875 HRES1P13985 223 aa8.25□□□□□ -1.09
GDF9-201ENST00000296875 A8MUN3 132 aa8.24□□□□□ -1.09
GDF9-201ENST00000296875 SMR3BP02814 79 aaPredicted RBP8.23□□□□□ -1.09
GDF9-201ENST00000296875 PRR15LQ9BU68 103 aa8.23□□□□□ -1.09
GDF9-201ENST00000296875 KRTAP10-4P60372 401 aaPredicted RBP8.22□□□□□ -1.09
GDF9-201ENST00000296875 DMAC1Q96GE9 116 aa8.22□□□□□ -1.09
GDF9-201ENST00000296875 LINC01558Q9Y6Z2 57 aa8.22□□□□□ -1.09
GDF9-201ENST00000296875 CHKB-CPT1BH3BT56 60 aa8.22□□□□□ -1.09
GDF9-201ENST00000296875 Q75L30 129 aa8.21□□□□□ -1.1
GDF9-201ENST00000296875 PRR26Q8N8Z3 221 aa8.21□□□□□ -1.1
GDF9-201ENST00000296875 Q5VV11 94 aa8.2□□□□□ -1.1
GDF9-201ENST00000296875 PKHD1L1Q86WI1 4243 aa8.19□□□□□ -1.1
GDF9-201ENST00000296875 KRTAP4-5Q9BYR2 181 aa8.19□□□□□ -1.1
GDF9-201ENST00000296875 RETNLBQ9BQ08 111 aa8.15□□□□□ -1.11
GDF9-201ENST00000296875 C7orf65Q6ZTY9 151 aa8.14□□□□□ -1.11
GDF9-201ENST00000296875 IGKV2D-30A0A075B6S6 120 aa8.13□□□□□ -1.11
GDF9-201ENST00000296875 A6NED7 52 aa8.12□□□□□ -1.11
GDF9-201ENST00000296875 Q5VSD8 79 aa8.07□□□□□ -1.12
GDF9-201ENST00000296875 C20orf166-AS1Q96NR2 134 aa8.05□□□□□ -1.12
GDF9-201ENST00000296875 Q8N1X5 172 aa8.05□□□□□ -1.12
GDF9-201ENST00000296875 A8MUU9 505 aa8.04□□□□□ -1.12
GDF9-201ENST00000296875 CDC42SE1Q9NRR8 79 aa8.04□□□□□ -1.12
GDF9-201ENST00000296875 SPTSSBQ8NFR3 76 aa8.02□□□□□ -1.13
GDF9-201ENST00000296875 ATP11AUNQ6ZP68 121 aa8.02□□□□□ -1.13
GDF9-201ENST00000296875 A0A1B0GU69 56 aa7.99□□□□□ -1.13
GDF9-201ENST00000296875 FLG2Q5D862 2391 aaPredicted RBP7.97□□□□□ -1.13
GDF9-201ENST00000296875 LRP1Q07954 4544 aaKnown RBP7.97□□□□□ -1.13
GDF9-201ENST00000296875 HERC1Q15751 4861 aa7.96□□□□□ -1.14
GDF9-201ENST00000296875 FAT3Q8TDW7 4589 aa7.95□□□□□ -1.14
GDF9-201ENST00000296875 C9orf92A6NGG3 77 aa7.95□□□□□ -1.14
GDF9-201ENST00000296875 TNXBP22105 4242 aa7.93□□□□□ -1.14
GDF9-201ENST00000296875 PMAIP1Q13794 54 aa7.93□□□□□ -1.14
GDF9-201ENST00000296875 MYCBP2O75592 4640 aa7.93□□□□□ -1.14
GDF9-201ENST00000296875 LCA10Q71F78 164 aa7.92□□□□□ -1.14
GDF9-201ENST00000296875 SEC61GP60059 68 aa7.91□□□□□ -1.14
GDF9-201ENST00000296875 SPINK7P58062 85 aa7.88□□□□□ -1.15
GDF9-201ENST00000296875 KRTAP10-8P60410 259 aa7.87□□□□□ -1.15
GDF9-201ENST00000296875 UQCR11O14957 56 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms