RNA–Protein interactions for RNA: ENST00000296824.3

CCDC127-201, Transcript of coiled-coil domain containing 127, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC127, Length 9,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC127-201ENST00000296824 COL12A1Q99715 3063 aa8.52□□□□□ -1.05
CCDC127-201ENST00000296824 TPRXLQ17RH7 258 aa8.51□□□□□ -1.05
CCDC127-201ENST00000296824 GOLGB1Q14789 3259 aaKnown RBP8.51□□□□□ -1.05
CCDC127-201ENST00000296824 KRTAP13-2Q52LG2 175 aa8.5□□□□□ -1.05
CCDC127-201ENST00000296824 VWFP04275 2813 aa8.5□□□□□ -1.05
CCDC127-201ENST00000296824 SRRM2Q9UQ35 2752 aaKnown RBP8.48□□□□□ -1.05
CCDC127-201ENST00000296824 VPS13AQ96RL7 3174 aa8.48□□□□□ -1.05
CCDC127-201ENST00000296824 KRTAP10-10P60014 251 aa8.47□□□□□ -1.05
CCDC127-201ENST00000296824 PRUNE2Q8WUY3 3088 aa8.46□□□□□ -1.05
CCDC127-201ENST00000296824 DMXL2Q8TDJ6 3036 aa8.45□□□□□ -1.06
CCDC127-201ENST00000296824 UTRNP46939 3433 aa8.45□□□□□ -1.06
CCDC127-201ENST00000296824 KRTAP13-1Q8IUC0 172 aa8.44□□□□□ -1.06
CCDC127-201ENST00000296824 PKD1L1Q8TDX9 2849 aa8.44□□□□□ -1.06
CCDC127-201ENST00000296824 DCHS2Q6V1P9 2916 aa8.43□□□□□ -1.06
CCDC127-201ENST00000296824 ZZEF1O43149 2961 aa8.4□□□□□ -1.06
CCDC127-201ENST00000296824 XP32Q5T750 250 aa8.37□□□□□ -1.07
CCDC127-201ENST00000296824 REV3LO60673 3130 aa8.37□□□□□ -1.07
CCDC127-201ENST00000296824 H0YAA0 97 aa8.34□□□□□ -1.07
CCDC127-201ENST00000296824 TENM2Q9NT68 2774 aa8.34□□□□□ -1.07
CCDC127-201ENST00000296824 TACC2O95359 2948 aa8.33□□□□□ -1.08
CCDC127-201ENST00000296824 LAMA1P25391 3075 aa8.32□□□□□ -1.08
CCDC127-201ENST00000296824 ZANQ9Y493 2812 aa8.3□□□□□ -1.08
CCDC127-201ENST00000296824 NBEAQ8NFP9 2946 aa8.28□□□□□ -1.08
CCDC127-201ENST00000296824 A0A1B0GVY2 172 aa8.21□□□□□ -1.1
CCDC127-201ENST00000296824 CELSR1Q9NYQ6 3014 aa8.18□□□□□ -1.1
CCDC127-201ENST00000296824 COL7A1Q02388 2944 aa8.12□□□□□ -1.11
CCDC127-201ENST00000296824 MXRA5Q9NR99 2828 aa8.12□□□□□ -1.11
CCDC127-201ENST00000296824 FREM2Q5SZK8 3169 aa8.09□□□□□ -1.11
CCDC127-201ENST00000296824 ATMQ13315 3056 aa8.06□□□□□ -1.12
CCDC127-201ENST00000296824 USP34Q70CQ2 3546 aa8.06□□□□□ -1.12
CCDC127-201ENST00000296824 XIRP2A4UGR9 3374 aa8.05□□□□□ -1.12
CCDC127-201ENST00000296824 KRTAP7-1Q8IUC3 87 aa8.05□□□□□ -1.12
CCDC127-201ENST00000296824 BOD1L1Q8NFC6 3051 aa8.04□□□□□ -1.12
CCDC127-201ENST00000296824 FBN2P35556 2912 aa8.02□□□□□ -1.13
CCDC127-201ENST00000296824 DMXL1Q9Y485 3027 aa8.01□□□□□ -1.13
CCDC127-201ENST00000296824 KRTAP13-3Q3SY46 172 aa8□□□□□ -1.13
CCDC127-201ENST00000296824 KRTAP13-4Q3LI77 160 aa7.99□□□□□ -1.13
CCDC127-201ENST00000296824 INE1O15225 51 aa7.98□□□□□ -1.13
CCDC127-201ENST00000296824 ADGRG4Q8IZF6 3080 aa7.98□□□□□ -1.13
CCDC127-201ENST00000296824 KRTAP1-4P0C5Y4 121 aa7.96□□□□□ -1.14
CCDC127-201ENST00000296824 HTTP42858 3142 aa7.95□□□□□ -1.14
CCDC127-201ENST00000296824 KRTAP12-2P59991 146 aa7.94□□□□□ -1.14
CCDC127-201ENST00000296824 ZFHX3Q15911 3703 aa7.86□□□□□ -1.15
CCDC127-201ENST00000296824 RANBP2P49792 3224 aaKnown RBP7.85□□□□□ -1.15
CCDC127-201ENST00000296824 UNC80Q8N2C7 3258 aa7.84□□□□□ -1.15
CCDC127-201ENST00000296824 KRTAP15-1Q3LI76 137 aa7.83□□□□□ -1.16
CCDC127-201ENST00000296824 MKI67P46013 3256 aaKnown RBP7.82□□□□□ -1.16
CCDC127-201ENST00000296824 MEGF8Q7Z7M0 2845 aa7.81□□□□□ -1.16
CCDC127-201ENST00000296824 HRNRQ86YZ3 2850 aaPredicted RBP7.81□□□□□ -1.16
CCDC127-201ENST00000296824 COL6A3P12111 3177 aa7.81□□□□□ -1.16
CCDC127-201ENST00000296824 DNAH14Q0VDD8 3507 aa7.77□□□□□ -1.17
CCDC127-201ENST00000296824 CELSR3Q9NYQ7 3312 aa7.75□□□□□ -1.17
CCDC127-201ENST00000296824 FBN3Q75N90 2809 aa7.65□□□□□ -1.18
CCDC127-201ENST00000296824 VCANP13611 3396 aa7.64□□□□□ -1.19
CCDC127-201ENST00000296824 LAMA3Q16787 3333 aa7.63□□□□□ -1.19
CCDC127-201ENST00000296824 CFAP47Q6ZTR5 3102 aa7.6□□□□□ -1.19
CCDC127-201ENST00000296824 SPEGQ15772 3267 aa7.56□□□□□ -1.2
CCDC127-201ENST00000296824 NBPF19A0A087WUL8 3843 aa7.56□□□□□ -1.2
CCDC127-201ENST00000296824 KRTAP12-1P59990 96 aa7.52□□□□□ -1.21
CCDC127-201ENST00000296824 ZFHX4Q86UP3 3567 aa7.46□□□□□ -1.22
CCDC127-201ENST00000296824 SPTBN5Q9NRC6 3674 aaKnown RBP7.44□□□□□ -1.22
CCDC127-201ENST00000296824 BRCA2P51587 3418 aa7.4□□□□□ -1.23
CCDC127-201ENST00000296824 KRTAP10-12P60413 245 aa7.39□□□□□ -1.23
CCDC127-201ENST00000296824 FBN1P35555 2871 aaKnown RBP7.34□□□□□ -1.23
CCDC127-201ENST00000296824 OTOGQ6ZRI0 2925 aa7.24□□□□□ -1.25
CCDC127-201ENST00000296824 SZT2Q5T011 3432 aa7.22□□□□□ -1.25
CCDC127-201ENST00000296824 KRTAP23-1A1A580 65 aa7.21□□□□□ -1.26
CCDC127-201ENST00000296824 CRCT1Q9UGL9 99 aa7.18□□□□□ -1.26
CCDC127-201ENST00000296824 AKAP9Q99996 3911 aa7.17□□□□□ -1.26
CCDC127-201ENST00000296824 EYSQ5T1H1 3165 aa7.17□□□□□ -1.26
CCDC127-201ENST00000296824 KRTAP10-6P60371 365 aaPredicted RBP7.15□□□□□ -1.26
CCDC127-201ENST00000296824 CDH23Q9H251 3354 aa7.14□□□□□ -1.27
CCDC127-201ENST00000296824 SPENQ96T58 3664 aaKnown RBP7.13□□□□□ -1.27
CCDC127-201ENST00000296824 MYO15AQ9UKN7 3530 aa7.13□□□□□ -1.27
CCDC127-201ENST00000296824 KRTAP12-3P60328 96 aa7.05□□□□□ -1.28
CCDC127-201ENST00000296824 DMDP11532 3685 aa7.05□□□□□ -1.28
CCDC127-201ENST00000296824 WDFY3Q8IZQ1 3526 aa7□□□□□ -1.29
CCDC127-201ENST00000296824 SMG1Q96Q15 3661 aaKnown RBP6.96□□□□□ -1.3
CCDC127-201ENST00000296824 KRTAP3-1Q9BYR8 98 aa6.92□□□□□ -1.3
CCDC127-201ENST00000296824 LOC400499M0QZD8 3231 aa6.91□□□□□ -1.3
CCDC127-201ENST00000296824 ALMS1Q8TCU4 4167 aa6.9□□□□□ -1.3
CCDC127-201ENST00000296824 VPS13CQ709C8 3753 aa6.88□□□□□ -1.31
CCDC127-201ENST00000296824 KRTAP8-1Q8IUC2 63 aa6.84□□□□□ -1.31
CCDC127-201ENST00000296824 KRTAP10-5P60370 271 aa6.82□□□□□ -1.32
CCDC127-201ENST00000296824 LAMA5O15230 3695 aa6.82□□□□□ -1.32
CCDC127-201ENST00000296824 TRRAPQ9Y4A5 3859 aa6.78□□□□□ -1.32
CCDC127-201ENST00000296824 ASPMQ8IZT6 3477 aa6.78□□□□□ -1.32
CCDC127-201ENST00000296824 CMYA5Q8N3K9 4069 aa6.72□□□□□ -1.33
CCDC127-201ENST00000296824 RELNP78509 3460 aa6.68□□□□□ -1.34
CCDC127-201ENST00000296824 DCHS1Q96JQ0 3298 aa6.66□□□□□ -1.34
CCDC127-201ENST00000296824 BSNQ9UPA5 3926 aa6.66□□□□□ -1.34
CCDC127-201ENST00000296824 KRTAP3-2Q9BYR7 98 aa6.62□□□□□ -1.35
CCDC127-201ENST00000296824 LCE3AQ5TA76 89 aa6.62□□□□□ -1.35
CCDC127-201ENST00000296824 DNAH3Q8TD57 4116 aa6.59□□□□□ -1.35
CCDC127-201ENST00000296824 KRTAP10-7P60409 375 aaPredicted RBP6.56□□□□□ -1.36
CCDC127-201ENST00000296824 KRTAP3-3Q9BYR6 98 aa6.54□□□□□ -1.36
CCDC127-201ENST00000296824 LYSTQ99698 3801 aa6.53□□□□□ -1.36
CCDC127-201ENST00000296824 MT1HL1P0DM35 61 aa6.52□□□□□ -1.37
CCDC127-201ENST00000296824 KRTAP19-4Q3LI73 84 aa6.51□□□□□ -1.37
CCDC127-201ENST00000296824 CSMD1Q96PZ7 3565 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms