RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 LRBAP50851 2863 aa6.61□□□□□ -1.35
SLX4-201ENST00000294008 NBEAQ8NFP9 2946 aa6.61□□□□□ -1.35
SLX4-201ENST00000294008 GCN1Q92616 2671 aaKnown RBP6.6□□□□□ -1.35
SLX4-201ENST00000294008 MYO15AQ9UKN7 3530 aa6.58□□□□□ -1.36
SLX4-201ENST00000294008 NBEAL2Q6ZNJ1 2754 aa6.57□□□□□ -1.36
SLX4-201ENST00000294008 USP34Q70CQ2 3546 aa6.54□□□□□ -1.36
SLX4-201ENST00000294008 UNC79Q9P2D8 2635 aa6.53□□□□□ -1.36
SLX4-201ENST00000294008 ADGRG4Q8IZF6 3080 aa6.53□□□□□ -1.36
SLX4-201ENST00000294008 COL6A5A8TX70 2615 aa6.53□□□□□ -1.36
SLX4-201ENST00000294008 ZNF292O60281 2723 aa6.52□□□□□ -1.37
SLX4-201ENST00000294008 DMXL2Q8TDJ6 3036 aa6.52□□□□□ -1.37
SLX4-201ENST00000294008 CRYBG3Q68DQ2 2970 aa6.51□□□□□ -1.37
SLX4-201ENST00000294008 CRCT1Q9UGL9 99 aa6.51□□□□□ -1.37
SLX4-201ENST00000294008 KRTAP7-1Q8IUC3 87 aa6.5□□□□□ -1.37
SLX4-201ENST00000294008 KMT2BQ9UMN6 2715 aaPredicted RBP6.49□□□□□ -1.37
SLX4-201ENST00000294008 NOTCH1P46531 2555 aa6.48□□□□□ -1.37
SLX4-201ENST00000294008 WDFY3Q8IZQ1 3526 aa6.46□□□□□ -1.38
SLX4-201ENST00000294008 KRTAP12-2P59991 146 aa6.44□□□□□ -1.38
SLX4-201ENST00000294008 ASH1LQ9NR48 2969 aaKnown RBP6.44□□□□□ -1.38
SLX4-201ENST00000294008 ATMQ13315 3056 aa6.43□□□□□ -1.38
SLX4-201ENST00000294008 TACC2O95359 2948 aa6.43□□□□□ -1.38
SLX4-201ENST00000294008 KRTAP13-1Q8IUC0 172 aa6.41□□□□□ -1.38
SLX4-201ENST00000294008 H0YAA0 97 aa6.41□□□□□ -1.38
SLX4-201ENST00000294008 TPRXLQ17RH7 258 aa6.4□□□□□ -1.38
SLX4-201ENST00000294008 IGSF10Q6WRI0 2623 aa6.4□□□□□ -1.39
SLX4-201ENST00000294008 COL12A1Q99715 3063 aa6.39□□□□□ -1.39
SLX4-201ENST00000294008 LOC400499M0QZD8 3231 aa6.36□□□□□ -1.39
SLX4-201ENST00000294008 TNRC18O15417 2968 aaPredicted RBP6.35□□□□□ -1.39
SLX4-201ENST00000294008 ZZEF1O43149 2961 aa6.35□□□□□ -1.39
SLX4-201ENST00000294008 ITPR2Q14571 2701 aa6.33□□□□□ -1.4
SLX4-201ENST00000294008 APCP25054 2843 aa6.33□□□□□ -1.4
SLX4-201ENST00000294008 KRTAP15-1Q3LI76 137 aa6.32□□□□□ -1.4
SLX4-201ENST00000294008 ITPR1Q14643 2758 aa6.32□□□□□ -1.4
SLX4-201ENST00000294008 UBR5O95071 2799 aaPredicted RBP6.31□□□□□ -1.4
SLX4-201ENST00000294008 UTP20O75691 2785 aaKnown RBP6.28□□□□□ -1.4
SLX4-201ENST00000294008 DCHS1Q96JQ0 3298 aa6.28□□□□□ -1.4
SLX4-201ENST00000294008 NSD1Q96L73 2696 aaPredicted RBP6.28□□□□□ -1.4
SLX4-201ENST00000294008 DMXL1Q9Y485 3027 aa6.26□□□□□ -1.41
SLX4-201ENST00000294008 ASPMQ8IZT6 3477 aa6.26□□□□□ -1.41
SLX4-201ENST00000294008 KRTAP1-4P0C5Y4 121 aa6.24□□□□□ -1.41
SLX4-201ENST00000294008 KRTAP21-3Q3LHN1 58 aa6.23□□□□□ -1.41
SLX4-201ENST00000294008 KRTAP13-3Q3SY46 172 aa6.22□□□□□ -1.41
SLX4-201ENST00000294008 HIVEP1P15822 2718 aa6.21□□□□□ -1.42
SLX4-201ENST00000294008 CELSR2Q9HCU4 2923 aa6.17□□□□□ -1.42
SLX4-201ENST00000294008 ZFHX4Q86UP3 3567 aa6.15□□□□□ -1.42
SLX4-201ENST00000294008 FLNCQ14315 2725 aa6.15□□□□□ -1.43
SLX4-201ENST00000294008 CSMD1Q96PZ7 3565 aa6.13□□□□□ -1.43
SLX4-201ENST00000294008 LAMA5O15230 3695 aa6.12□□□□□ -1.43
SLX4-201ENST00000294008 RELNP78509 3460 aa6.1□□□□□ -1.43
SLX4-201ENST00000294008 NBPF19A0A087WUL8 3843 aa6.09□□□□□ -1.43
SLX4-201ENST00000294008 DMDP11532 3685 aa6.07□□□□□ -1.44
SLX4-201ENST00000294008 KRTAP13-4Q3LI77 160 aa6.07□□□□□ -1.44
SLX4-201ENST00000294008 ZANQ9Y493 2812 aa6.05□□□□□ -1.44
SLX4-201ENST00000294008 DCHS2Q6V1P9 2916 aa6.05□□□□□ -1.44
SLX4-201ENST00000294008 FBN2P35556 2912 aa6.05□□□□□ -1.44
SLX4-201ENST00000294008 HRNRQ86YZ3 2850 aaPredicted RBP6.03□□□□□ -1.44
SLX4-201ENST00000294008 SMG1Q96Q15 3661 aaKnown RBP5.95□□□□□ -1.46
SLX4-201ENST00000294008 CELSR1Q9NYQ6 3014 aa5.94□□□□□ -1.46
SLX4-201ENST00000294008 MUC3AQ02505 3323 aa5.93□□□□□ -1.46
SLX4-201ENST00000294008 NF1P21359 2839 aa5.91□□□□□ -1.46
SLX4-201ENST00000294008 KRTAP12-1P59990 96 aa5.88□□□□□ -1.47
SLX4-201ENST00000294008 KRTAP10-6P60371 365 aaPredicted RBP5.87□□□□□ -1.47
SLX4-201ENST00000294008 TENM4Q6N022 2769 aa5.87□□□□□ -1.47
SLX4-201ENST00000294008 SVEP1Q4LDE5 3571 aa5.85□□□□□ -1.47
SLX4-201ENST00000294008 NIPBLQ6KC79 2804 aaeCLIP5.85□□□□□ -1.47
SLX4-201ENST00000294008 CUBNO60494 3623 aa5.82□□□□□ -1.48
SLX4-201ENST00000294008 ZFHX3Q15911 3703 aa5.81□□□□□ -1.48
SLX4-201ENST00000294008 SPENQ96T58 3664 aaKnown RBP5.79□□□□□ -1.48
SLX4-201ENST00000294008 KRTAP10-12P60413 245 aa5.79□□□□□ -1.48
SLX4-201ENST00000294008 KRTAP10-5P60370 271 aa5.76□□□□□ -1.49
SLX4-201ENST00000294008 TENM1Q9UKZ4 2725 aa5.75□□□□□ -1.49
SLX4-201ENST00000294008 LORP23490 312 aaPredicted RBP5.75□□□□□ -1.49
SLX4-201ENST00000294008 TENM3Q9P273 2699 aa5.75□□□□□ -1.49
SLX4-201ENST00000294008 MXRA5Q9NR99 2828 aa5.75□□□□□ -1.49
SLX4-201ENST00000294008 TENM2Q9NT68 2774 aa5.69□□□□□ -1.5
SLX4-201ENST00000294008 INE1O15225 51 aa5.66□□□□□ -1.5
SLX4-201ENST00000294008 TGP01266 2768 aa5.65□□□□□ -1.5
SLX4-201ENST00000294008 PKD1L1Q8TDX9 2849 aa5.61□□□□□ -1.51
SLX4-201ENST00000294008 CSMD2Q7Z408 3487 aa5.59□□□□□ -1.51
SLX4-201ENST00000294008 PDZD2O15018 2839 aa5.58□□□□□ -1.52
SLX4-201ENST00000294008 VWFP04275 2813 aa5.57□□□□□ -1.52
SLX4-201ENST00000294008 KRTAP8-1Q8IUC2 63 aa5.55□□□□□ -1.52
SLX4-201ENST00000294008 KRTAP12-3P60328 96 aa5.53□□□□□ -1.52
SLX4-201ENST00000294008 BSNQ9UPA5 3926 aa5.53□□□□□ -1.52
SLX4-201ENST00000294008 KRTAP3-1Q9BYR8 98 aa5.51□□□□□ -1.53
SLX4-201ENST00000294008 LCE3AQ5TA76 89 aa5.47□□□□□ -1.53
SLX4-201ENST00000294008 FBN1P35555 2871 aaKnown RBP5.45□□□□□ -1.54
SLX4-201ENST00000294008 VPS13CQ709C8 3753 aa5.44□□□□□ -1.54
SLX4-201ENST00000294008 TRRAPQ9Y4A5 3859 aa5.41□□□□□ -1.54
SLX4-201ENST00000294008 ANK3Q12955 4377 aaKnown RBP5.33□□□□□ -1.56
SLX4-201ENST00000294008 KRTAP4-5Q9BYR2 181 aa5.32□□□□□ -1.56
SLX4-201ENST00000294008 KRTAP10-7P60409 375 aaPredicted RBP5.29□□□□□ -1.56
SLX4-201ENST00000294008 FBN3Q75N90 2809 aa5.28□□□□□ -1.56
SLX4-201ENST00000294008 OTOGQ6ZRI0 2925 aa5.26□□□□□ -1.57
SLX4-201ENST00000294008 MEGF8Q7Z7M0 2845 aa5.25□□□□□ -1.57
SLX4-201ENST00000294008 CSMD3Q7Z407 3707 aa5.25□□□□□ -1.57
SLX4-201ENST00000294008 COL7A1Q02388 2944 aa5.23□□□□□ -1.57
SLX4-201ENST00000294008 SPRR2FQ96RM1 72 aa5.2□□□□□ -1.58
SLX4-201ENST00000294008 MT1HL1P0DM35 61 aa5.19□□□□□ -1.58
SLX4-201ENST00000294008 SRRM2Q9UQ35 2752 aaKnown RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms