RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 C9orf92A6NGG3 77 aa9.44□□□□□ -0.9
SKP2-201ENST00000274254 IGKV3D-7A0A0C4DH55 119 aa9.43□□□□□ -0.9
SKP2-201ENST00000274254 NDUFB1O75438 58 aa9.42□□□□□ -0.9
SKP2-201ENST00000274254 CDIP1Q9H305 208 aa9.41□□□□□ -0.9
SKP2-201ENST00000274254 IGHV6-1A0A0B4J1U7 121 aa9.41□□□□□ -0.9
SKP2-201ENST00000274254 LRP2P98164 4655 aa9.41□□□□□ -0.9
SKP2-201ENST00000274254 PRR15Q8IV56 129 aa9.41□□□□□ -0.9
SKP2-201ENST00000274254 K7EQZ3 153 aa9.39□□□□□ -0.91
SKP2-201ENST00000274254 CXCL6P80162 114 aa9.39□□□□□ -0.91
SKP2-201ENST00000274254 NOTCH2NLQ7Z3S9 236 aa9.39□□□□□ -0.91
SKP2-201ENST00000274254 C8orf87E5RJ46 101 aa9.38□□□□□ -0.91
SKP2-201ENST00000274254 LINC00313P59037 77 aa9.38□□□□□ -0.91
SKP2-201ENST00000274254 XP32Q5T750 250 aa9.38□□□□□ -0.91
SKP2-201ENST00000274254 LINC00643Q86TS7 51 aa9.36□□□□□ -0.91
SKP2-201ENST00000274254 Q8N9L7 120 aa9.36□□□□□ -0.91
SKP2-201ENST00000274254 KRTAP16-1A8MUX0 517 aa9.34□□□□□ -0.91
SKP2-201ENST00000274254 ATP5EP2Q5VTU8 51 aa9.34□□□□□ -0.91
SKP2-201ENST00000274254 C8orf17Q9NRJ1 99 aa9.34□□□□□ -0.91
SKP2-201ENST00000274254 MMP24-AS1A0A0U1RRL7 71 aa9.3□□□□□ -0.92
SKP2-201ENST00000274254 C20orf166-AS1Q96NR2 134 aa9.29□□□□□ -0.92
SKP2-201ENST00000274254 Q75L30 129 aa9.27□□□□□ -0.93
SKP2-201ENST00000274254 A8MUU9 505 aa9.26□□□□□ -0.93
SKP2-201ENST00000274254 RPL37P61927 97 aaKnown RBP9.26□□□□□ -0.93
SKP2-201ENST00000274254 hDV103S1A0JD37 113 aa9.24□□□□□ -0.93
SKP2-201ENST00000274254 LCE2DQ5TA82 110 aaPredicted RBP9.23□□□□□ -0.93
SKP2-201ENST00000274254 TMEM254Q8TBM7 123 aa9.23□□□□□ -0.93
SKP2-201ENST00000274254 Q8N9P0 234 aaPredicted RBP9.22□□□□□ -0.93
SKP2-201ENST00000274254 HCG22E2RYF7 251 aa9.21□□□□□ -0.93
SKP2-201ENST00000274254 CASC2Q6XLA1 102 aa9.21□□□□□ -0.94
SKP2-201ENST00000274254 WFDC13Q8IUB5 93 aa9.21□□□□□ -0.94
SKP2-201ENST00000274254 MRPL34Q9BQ48 92 aaKnown RBP9.21□□□□□ -0.94
SKP2-201ENST00000274254 SEC61BP60468 96 aaKnown RBP9.2□□□□□ -0.94
SKP2-201ENST00000274254 HIST1H4AP62805 103 aaKnown RBP9.2□□□□□ -0.94
SKP2-201ENST00000274254 UBR4Q5T4S7 5183 aa9.17□□□□□ -0.94
SKP2-201ENST00000274254 MT-ATP8P03928 68 aa9.16□□□□□ -0.94
SKP2-201ENST00000274254 PCOTHQ58A44 107 aa9.15□□□□□ -0.94
SKP2-201ENST00000274254 MUC17Q685J3 4493 aa9.14□□□□□ -0.95
SKP2-201ENST00000274254 A0A087WVE0 104 aa9.14□□□□□ -0.95
SKP2-201ENST00000274254 ATP11AUNQ6ZP68 121 aa9.14□□□□□ -0.95
SKP2-201ENST00000274254 IMUPQ9GZP8 106 aa9.1□□□□□ -0.95
SKP2-201ENST00000274254 NDUFS5O43920 106 aa9.09□□□□□ -0.95
SKP2-201ENST00000274254 ZCCHC13Q8WW36 166 aaKnown RBP9.08□□□□□ -0.96
SKP2-201ENST00000274254 KRTAP4-1Q9BYQ7 146 aa9.05□□□□□ -0.96
SKP2-201ENST00000274254 TP53AIP1Q9HCN2 124 aa9.01□□□□□ -0.97
SKP2-201ENST00000274254 Q5W150 140 aa9□□□□□ -0.97
SKP2-201ENST00000274254 RNF213Q63HN8 5207 aa8.98□□□□□ -0.97
SKP2-201ENST00000274254 MUC2Q02817 5179 aa8.97□□□□□ -0.97
SKP2-201ENST00000274254 FAM236AA0A1B0GUQ0 79 aa8.92□□□□□ -0.98
SKP2-201ENST00000274254 FAM236BA0A1B0GV22 79 aa8.92□□□□□ -0.98
SKP2-201ENST00000274254 OCR1Q9BZK8 76 aa8.92□□□□□ -0.98
SKP2-201ENST00000274254 UQCRQO14949 82 aa8.91□□□□□ -0.98
SKP2-201ENST00000274254 SCGB1A1P11684 91 aa8.9□□□□□ -0.98
SKP2-201ENST00000274254 SPINK7P58062 85 aa8.9□□□□□ -0.99
SKP2-201ENST00000274254 TRAV22A0A0B4J277 110 aa8.88□□□□□ -0.99
SKP2-201ENST00000274254 C7orf65Q6ZTY9 151 aa8.83□□□□□ -1
SKP2-201ENST00000274254 IGKV2D-30A0A075B6S6 120 aa8.82□□□□□ -1
SKP2-201ENST00000274254 IGKV2-30P06310 120 aa8.82□□□□□ -1
SKP2-201ENST00000274254 HRES1P13985 223 aa8.82□□□□□ -1
SKP2-201ENST00000274254 H0Y9P7 68 aa8.81□□□□□ -1
SKP2-201ENST00000274254 ATOX1O00244 68 aa8.8□□□□□ -1
SKP2-201ENST00000274254 SMIM20Q8N5G0 67 aa8.8□□□□□ -1
SKP2-201ENST00000274254 KRTAP19-2Q3LHN2 52 aa8.79□□□□□ -1
SKP2-201ENST00000274254 C5orf47Q569G3 176 aa8.79□□□□□ -1
SKP2-201ENST00000274254 MPLKIPQ8TAP9 179 aa8.79□□□□□ -1
SKP2-201ENST00000274254 TRAV7A0A075B6U4 112 aa8.78□□□□□ -1
SKP2-201ENST00000274254 LOC101927531A0A1B0GV80 90 aa8.75□□□□□ -1.01
SKP2-201ENST00000274254 MP68P56378 58 aa8.75□□□□□ -1.01
SKP2-201ENST00000274254 CYP4F30PQ9H0H9 118 aa8.75□□□□□ -1.01
SKP2-201ENST00000274254 A0A0U1RQV1 116 aa8.73□□□□□ -1.01
SKP2-201ENST00000274254 C1orf64Q8NEQ6 169 aa8.72□□□□□ -1.01
SKP2-201ENST00000274254 LINC00208Q96KT6 92 aa8.72□□□□□ -1.01
SKP2-201ENST00000274254 H3BPC8 53 aa8.71□□□□□ -1.01
SKP2-201ENST00000274254 LCE2CQ5TA81 110 aa8.71□□□□□ -1.01
SKP2-201ENST00000274254 RBM12B-AS1Q9P1G2 102 aa8.7□□□□□ -1.02
SKP2-201ENST00000274254 SERP2Q8N6R1 65 aa8.69□□□□□ -1.02
SKP2-201ENST00000274254 FAT4Q6V0I7 4981 aa8.67□□□□□ -1.02
SKP2-201ENST00000274254 COX6B2Q6YFQ2 88 aa8.66□□□□□ -1.02
SKP2-201ENST00000274254 ANAPC13Q9BS18 74 aa8.66□□□□□ -1.02
SKP2-201ENST00000274254 C4orf26Q17RF5 130 aa8.64□□□□□ -1.03
SKP2-201ENST00000274254 FAM236DA0A1B0GTK5 79 aa8.62□□□□□ -1.03
SKP2-201ENST00000274254 FAM236CP0DP71 79 aa8.62□□□□□ -1.03
SKP2-201ENST00000274254 KLKP1Q107X0 134 aa8.61□□□□□ -1.03
SKP2-201ENST00000274254 COX7CP15954 63 aa8.6□□□□□ -1.03
SKP2-201ENST00000274254 KRTAP3-3Q9BYR6 98 aa8.58□□□□□ -1.04
SKP2-201ENST00000274254 KRTAP3-2Q9BYR7 98 aa8.58□□□□□ -1.04
SKP2-201ENST00000274254 MT1HP80294 61 aa8.55□□□□□ -1.04
SKP2-201ENST00000274254 C20orf197Q8N268 126 aa8.55□□□□□ -1.04
SKP2-201ENST00000274254 FLGP20930 4061 aaPredicted RBP8.55□□□□□ -1.04
SKP2-201ENST00000274254 KRTAP3-1Q9BYR8 98 aa8.54□□□□□ -1.04
SKP2-201ENST00000274254 LCE2AQ5TA79 106 aaPredicted RBP8.54□□□□□ -1.04
SKP2-201ENST00000274254 SNURFQ9Y675 71 aa8.54□□□□□ -1.04
SKP2-201ENST00000274254 H1FX-AS1Q4G0G2 97 aa8.51□□□□□ -1.05
SKP2-201ENST00000274254 CCDC179H3BU77 68 aa8.47□□□□□ -1.05
SKP2-201ENST00000274254 PCP4P48539 62 aa8.43□□□□□ -1.06
SKP2-201ENST00000274254 A8MUN3 132 aa8.42□□□□□ -1.06
SKP2-201ENST00000274254 M0R2T5 61 aa8.39□□□□□ -1.07
SKP2-201ENST00000274254 DMAC1Q96GE9 116 aa8.39□□□□□ -1.07
SKP2-201ENST00000274254 CYSTM1Q9H1C7 97 aa8.39□□□□□ -1.07
SKP2-201ENST00000274254 NDUFC1O43677 76 aa8.36□□□□□ -1.07
SKP2-201ENST00000274254 SPANXA2-OT1Q8N9U9 137 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms