RNA–Protein interactions for RNA: ENST00000271588.8

HMCN1-201, Transcript of hemicentin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMCN1, Length 18,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1-201ENST00000271588 KRTAP1-4P0C5Y4 121 aa2.59□□□□□ -1.99
HMCN1-201ENST00000271588 ASH1LQ9NR48 2969 aaKnown RBP2.59□□□□□ -1.99
HMCN1-201ENST00000271588 TENM4Q6N022 2769 aa2.59□□□□□ -2
HMCN1-201ENST00000271588 LRBAP50851 2863 aa2.58□□□□□ -2
HMCN1-201ENST00000271588 KRTAP23-1A1A580 65 aa2.58□□□□□ -2
HMCN1-201ENST00000271588 XP32Q5T750 250 aa2.57□□□□□ -2
HMCN1-201ENST00000271588 FRYQ5TBA9 3013 aa2.57□□□□□ -2
HMCN1-201ENST00000271588 CHD7Q9P2D1 2997 aa2.57□□□□□ -2
HMCN1-201ENST00000271588 DNAH12Q6ZR08 3092 aa2.57□□□□□ -2
HMCN1-201ENST00000271588 KRTAP13-4Q3LI77 160 aa2.56□□□□□ -2
HMCN1-201ENST00000271588 REV3LO60673 3130 aa2.56□□□□□ -2
HMCN1-201ENST00000271588 TACC2O95359 2948 aa2.55□□□□□ -2
HMCN1-201ENST00000271588 TRIOO75962 3097 aa2.54□□□□□ -2
HMCN1-201ENST00000271588 UTRNP46939 3433 aa2.54□□□□□ -2
HMCN1-201ENST00000271588 HUWE1Q7Z6Z7 4374 aaKnown RBP2.52□□□□□ -2.01
HMCN1-201ENST00000271588 KRTAP10-8P60410 259 aa2.52□□□□□ -2.01
HMCN1-201ENST00000271588 ZANQ9Y493 2812 aa2.51□□□□□ -2.01
HMCN1-201ENST00000271588 KRTAP15-1Q3LI76 137 aa2.5□□□□□ -2.01
HMCN1-201ENST00000271588 DCHS2Q6V1P9 2916 aa2.5□□□□□ -2.01
HMCN1-201ENST00000271588 MXRA5Q9NR99 2828 aa2.49□□□□□ -2.01
HMCN1-201ENST00000271588 ZZEF1O43149 2961 aa2.47□□□□□ -2.01
HMCN1-201ENST00000271588 TENM2Q9NT68 2774 aa2.47□□□□□ -2.01
HMCN1-201ENST00000271588 DNAH11Q96DT5 4516 aa2.47□□□□□ -2.01
HMCN1-201ENST00000271588 DNAH2Q9P225 4427 aa2.46□□□□□ -2.02
HMCN1-201ENST00000271588 C5orf42Q9H799 3197 aa2.46□□□□□ -2.02
HMCN1-201ENST00000271588 HTTP42858 3142 aa2.46□□□□□ -2.02
HMCN1-201ENST00000271588 KRTAP12-1P59990 96 aa2.44□□□□□ -2.02
HMCN1-201ENST00000271588 SRRM2Q9UQ35 2752 aaKnown RBP2.43□□□□□ -2.02
HMCN1-201ENST00000271588 DNAH1Q9P2D7 4330 aa2.43□□□□□ -2.02
HMCN1-201ENST00000271588 LAMA1P25391 3075 aa2.42□□□□□ -2.02
HMCN1-201ENST00000271588 COL12A1Q99715 3063 aa2.42□□□□□ -2.02
HMCN1-201ENST00000271588 CDH23Q9H251 3354 aa2.42□□□□□ -2.02
HMCN1-201ENST00000271588 HRNRQ86YZ3 2850 aaPredicted RBP2.42□□□□□ -2.02
HMCN1-201ENST00000271588 SZT2Q5T011 3432 aa2.42□□□□□ -2.02
HMCN1-201ENST00000271588 NBEAQ8NFP9 2946 aa2.41□□□□□ -2.02
HMCN1-201ENST00000271588 TNRC18O15417 2968 aaPredicted RBP2.41□□□□□ -2.02
HMCN1-201ENST00000271588 BOD1L1Q8NFC6 3051 aa2.4□□□□□ -2.03
HMCN1-201ENST00000271588 KRTAP19-4Q3LI73 84 aa2.4□□□□□ -2.03
HMCN1-201ENST00000271588 UNC80Q8N2C7 3258 aa2.39□□□□□ -2.03
HMCN1-201ENST00000271588 KRTAP12-2P59991 146 aa2.39□□□□□ -2.03
HMCN1-201ENST00000271588 VWFP04275 2813 aa2.38□□□□□ -2.03
HMCN1-201ENST00000271588 VPS13AQ96RL7 3174 aa2.38□□□□□ -2.03
HMCN1-201ENST00000271588 CELSR3Q9NYQ7 3312 aa2.37□□□□□ -2.03
HMCN1-201ENST00000271588 ATMQ13315 3056 aa2.37□□□□□ -2.03
HMCN1-201ENST00000271588 A0A1B0GVY2 172 aa2.37□□□□□ -2.03
HMCN1-201ENST00000271588 FBN2P35556 2912 aa2.36□□□□□ -2.03
HMCN1-201ENST00000271588 PKD1L1Q8TDX9 2849 aa2.36□□□□□ -2.03
HMCN1-201ENST00000271588 KRTAP10-10P60014 251 aa2.36□□□□□ -2.03
HMCN1-201ENST00000271588 KRTAP10-6P60371 365 aaPredicted RBP2.35□□□□□ -2.03
HMCN1-201ENST00000271588 FRAS1Q86XX4 4008 aa2.34□□□□□ -2.03
HMCN1-201ENST00000271588 MKI67P46013 3256 aaKnown RBP2.34□□□□□ -2.04
HMCN1-201ENST00000271588 XIRP2A4UGR9 3374 aa2.33□□□□□ -2.04
HMCN1-201ENST00000271588 WDFY4Q6ZS81 3184 aa2.33□□□□□ -2.04
HMCN1-201ENST00000271588 CFAP47Q6ZTR5 3102 aa2.33□□□□□ -2.04
HMCN1-201ENST00000271588 CMYA5Q8N3K9 4069 aa2.33□□□□□ -2.04
HMCN1-201ENST00000271588 LAMA3Q16787 3333 aa2.33□□□□□ -2.04
HMCN1-201ENST00000271588 BRCA2P51587 3418 aa2.33□□□□□ -2.04
HMCN1-201ENST00000271588 CELSR1Q9NYQ6 3014 aa2.32□□□□□ -2.04
HMCN1-201ENST00000271588 ADGRG4Q8IZF6 3080 aa2.32□□□□□ -2.04
HMCN1-201ENST00000271588 KRTAP3-1Q9BYR8 98 aa2.32□□□□□ -2.04
HMCN1-201ENST00000271588 VPS13DQ5THJ4 4388 aa2.31□□□□□ -2.04
HMCN1-201ENST00000271588 DNAH14Q0VDD8 3507 aa2.31□□□□□ -2.04
HMCN1-201ENST00000271588 DMXL1Q9Y485 3027 aa2.31□□□□□ -2.04
HMCN1-201ENST00000271588 RANBP2P49792 3224 aaKnown RBP2.3□□□□□ -2.04
HMCN1-201ENST00000271588 DNAH10Q8IVF4 4471 aa2.3□□□□□ -2.04
HMCN1-201ENST00000271588 AKAP9Q99996 3911 aa2.29□□□□□ -2.04
HMCN1-201ENST00000271588 MEGF8Q7Z7M0 2845 aa2.29□□□□□ -2.04
HMCN1-201ENST00000271588 ALMS1Q8TCU4 4167 aa2.27□□□□□ -2.05
HMCN1-201ENST00000271588 COL7A1Q02388 2944 aa2.25□□□□□ -2.05
HMCN1-201ENST00000271588 DNAH17Q9UFH2 4485 aa2.25□□□□□ -2.05
HMCN1-201ENST00000271588 KRTAP3-2Q9BYR7 98 aa2.25□□□□□ -2.05
HMCN1-201ENST00000271588 FBN3Q75N90 2809 aa2.25□□□□□ -2.05
HMCN1-201ENST00000271588 VCANP13611 3396 aa2.25□□□□□ -2.05
HMCN1-201ENST00000271588 PLECQ15149 4684 aaKnown RBP2.25□□□□□ -2.05
HMCN1-201ENST00000271588 NBPF19A0A087WUL8 3843 aa2.24□□□□□ -2.05
HMCN1-201ENST00000271588 MYO15AQ9UKN7 3530 aa2.24□□□□□ -2.05
HMCN1-201ENST00000271588 DNAH3Q8TD57 4116 aa2.23□□□□□ -2.05
HMCN1-201ENST00000271588 COL6A3P12111 3177 aa2.23□□□□□ -2.05
HMCN1-201ENST00000271588 SPEGQ15772 3267 aa2.22□□□□□ -2.05
HMCN1-201ENST00000271588 KRTAP10-12P60413 245 aa2.22□□□□□ -2.05
HMCN1-201ENST00000271588 DNAH6Q9C0G6 4158 aa2.21□□□□□ -2.06
HMCN1-201ENST00000271588 BSNQ9UPA5 3926 aa2.21□□□□□ -2.06
HMCN1-201ENST00000271588 KRTAP3-3Q9BYR6 98 aa2.2□□□□□ -2.06
HMCN1-201ENST00000271588 DNAH9Q9NYC9 4486 aa2.17□□□□□ -2.06
HMCN1-201ENST00000271588 KRTAP12-3P60328 96 aa2.17□□□□□ -2.06
HMCN1-201ENST00000271588 FAT3Q8TDW7 4589 aa2.16□□□□□ -2.06
HMCN1-201ENST00000271588 EYSQ5T1H1 3165 aa2.16□□□□□ -2.06
HMCN1-201ENST00000271588 DNAH7Q8WXX0 4024 aa2.15□□□□□ -2.06
HMCN1-201ENST00000271588 USP34Q70CQ2 3546 aa2.15□□□□□ -2.07
HMCN1-201ENST00000271588 FBN1P35555 2871 aaKnown RBP2.15□□□□□ -2.07
HMCN1-201ENST00000271588 DCHS1Q96JQ0 3298 aa2.14□□□□□ -2.07
HMCN1-201ENST00000271588 ANK3Q12955 4377 aaKnown RBP2.14□□□□□ -2.07
HMCN1-201ENST00000271588 OTOGQ6ZRI0 2925 aa2.13□□□□□ -2.07
HMCN1-201ENST00000271588 APOBP04114 4563 aaKnown RBP2.13□□□□□ -2.07
HMCN1-201ENST00000271588 PRKDCP78527 4128 aaKnown RBP2.13□□□□□ -2.07
HMCN1-201ENST00000271588 MT1HL1P0DM35 61 aa2.12□□□□□ -2.07
HMCN1-201ENST00000271588 SACSQ9NZJ4 4579 aa2.12□□□□□ -2.07
HMCN1-201ENST00000271588 ASPMQ8IZT6 3477 aa2.12□□□□□ -2.07
HMCN1-201ENST00000271588 KRTAP10-4P60372 401 aaPredicted RBP2.11□□□□□ -2.07
HMCN1-201ENST00000271588 PKHD1P08F94 4074 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 179.7 ms