RNA–Protein interactions for RNA: ENST00000267406.10

CBLN3-201, Transcript of cerebellin 3 precursor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBLN3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBLN3-201ENST00000267406 KRTAP10-1P60331 282 aa12.61□□□□□ -0.39
CBLN3-201ENST00000267406 KRTAP21-3Q3LHN1 58 aa12.61□□□□□ -0.39
CBLN3-201ENST00000267406 A0A087X002 238 aa12.61□□□□□ -0.39
CBLN3-201ENST00000267406 NOTCH2NLQ7Z3S9 236 aa12.61□□□□□ -0.39
CBLN3-201ENST00000267406 SPINK6Q6UWN8 80 aa12.6□□□□□ -0.39
CBLN3-201ENST00000267406 NDUFS5O43920 106 aa12.57□□□□□ -0.4
CBLN3-201ENST00000267406 HYDINQ4G0P3 5121 aa12.57□□□□□ -0.4
CBLN3-201ENST00000267406 PKD1P98161 4303 aa12.57□□□□□ -0.4
CBLN3-201ENST00000267406 TP53AIP1Q9HCN2 124 aa12.57□□□□□ -0.4
CBLN3-201ENST00000267406 Q6ZSA8 131 aa12.56□□□□□ -0.4
CBLN3-201ENST00000267406 MRPL34Q9BQ48 92 aaKnown RBP12.55□□□□□ -0.4
CBLN3-201ENST00000267406 SSBP3-AS1Q7Z2R9 100 aa12.54□□□□□ -0.4
CBLN3-201ENST00000267406 SPANXA2-OT1Q8N9U9 137 aa12.54□□□□□ -0.4
CBLN3-201ENST00000267406 CD164Q04900 197 aa12.53□□□□□ -0.4
CBLN3-201ENST00000267406 PSPHP1O15172 72 aa12.52□□□□□ -0.41
CBLN3-201ENST00000267406 SEC61GP60059 68 aa12.52□□□□□ -0.41
CBLN3-201ENST00000267406 FAT2Q9NYQ8 4349 aa12.5□□□□□ -0.41
CBLN3-201ENST00000267406 KRTAP13-2Q52LG2 175 aa12.48□□□□□ -0.41
CBLN3-201ENST00000267406 PCOTHQ58A44 107 aa12.48□□□□□ -0.41
CBLN3-201ENST00000267406 PMAIP1Q13794 54 aa12.46□□□□□ -0.41
CBLN3-201ENST00000267406 LRP1BQ9NZR2 4599 aa12.46□□□□□ -0.42
CBLN3-201ENST00000267406 A8MUN3 132 aa12.44□□□□□ -0.42
CBLN3-201ENST00000267406 Q5VV11 94 aa12.41□□□□□ -0.42
CBLN3-201ENST00000267406 IGLV7-46A0A075B6I9 117 aa12.4□□□□□ -0.42
CBLN3-201ENST00000267406 KRTAP1-4P0C5Y4 121 aa12.37□□□□□ -0.43
CBLN3-201ENST00000267406 Q5W150 140 aa12.36□□□□□ -0.43
CBLN3-201ENST00000267406 Q8N9P0 234 aaPredicted RBP12.36□□□□□ -0.43
CBLN3-201ENST00000267406 C8orf87E5RJ46 101 aa12.34□□□□□ -0.43
CBLN3-201ENST00000267406 LIMD2Q9BT23 127 aa12.32□□□□□ -0.44
CBLN3-201ENST00000267406 A8MU10 97 aa12.31□□□□□ -0.44
CBLN3-201ENST00000267406 KRTAP13-3Q3SY46 172 aa12.31□□□□□ -0.44
CBLN3-201ENST00000267406 COA5Q86WW8 74 aa12.31□□□□□ -0.44
CBLN3-201ENST00000267406 LINC00313P59037 77 aa12.29□□□□□ -0.44
CBLN3-201ENST00000267406 VPS13BQ7Z7G8 4022 aa12.29□□□□□ -0.44
CBLN3-201ENST00000267406 LOC101927531A0A1B0GV80 90 aa12.26□□□□□ -0.45
CBLN3-201ENST00000267406 PLA2G1BP04054 148 aaKnown RBP12.25□□□□□ -0.45
CBLN3-201ENST00000267406 CHKB-CPT1BH3BT56 60 aa12.23□□□□□ -0.45
CBLN3-201ENST00000267406 TYMSOSQ8TAI1 123 aa12.2□□□□□ -0.46
CBLN3-201ENST00000267406 RETNLBQ9BQ08 111 aa12.2□□□□□ -0.46
CBLN3-201ENST00000267406 PRR15LQ9BU68 103 aa12.2□□□□□ -0.46
CBLN3-201ENST00000267406 Q75L30 129 aa12.19□□□□□ -0.46
CBLN3-201ENST00000267406 SACSQ9NZJ4 4579 aa12.18□□□□□ -0.46
CBLN3-201ENST00000267406 C4orf48Q5BLP8 95 aa12.17□□□□□ -0.46
CBLN3-201ENST00000267406 KRTAP16-1A8MUX0 517 aa12.16□□□□□ -0.46
CBLN3-201ENST00000267406 HRES1P13985 223 aa12.16□□□□□ -0.46
CBLN3-201ENST00000267406 PKHD1P08F94 4074 aa12.16□□□□□ -0.46
CBLN3-201ENST00000267406 LCA10Q71F78 164 aa12.15□□□□□ -0.46
CBLN3-201ENST00000267406 FAM229AH3BQW9 127 aa12.13□□□□□ -0.47
CBLN3-201ENST00000267406 ATP11AUNQ6ZP68 121 aa12.12□□□□□ -0.47
CBLN3-201ENST00000267406 SMR3BP02814 79 aaPredicted RBP12.11□□□□□ -0.47
CBLN3-201ENST00000267406 SPINK1P00995 79 aa12.1□□□□□ -0.47
CBLN3-201ENST00000267406 PRR26Q8N8Z3 221 aa12.1□□□□□ -0.47
CBLN3-201ENST00000267406 KTN1-AS1Q86SY8 53 aa12.08□□□□□ -0.48
CBLN3-201ENST00000267406 DYNC1H1Q14204 4646 aaKnown RBP12.04□□□□□ -0.48
CBLN3-201ENST00000267406 A6NED7 52 aa12.04□□□□□ -0.48
CBLN3-201ENST00000267406 IGKV2-30P06310 120 aa12.04□□□□□ -0.48
CBLN3-201ENST00000267406 SPAG11AQ6PDA7 123 aa12.04□□□□□ -0.48
CBLN3-201ENST00000267406 LINC01558Q9Y6Z2 57 aa12.04□□□□□ -0.48
CBLN3-201ENST00000267406 LINC00304Q8N9R0 145 aa12.03□□□□□ -0.48
CBLN3-201ENST00000267406 SPTSSBQ8NFR3 76 aa12.03□□□□□ -0.48
CBLN3-201ENST00000267406 CDC42SE1Q9NRR8 79 aa12.03□□□□□ -0.48
CBLN3-201ENST00000267406 A0A1B0GVY2 172 aa12.02□□□□□ -0.49
CBLN3-201ENST00000267406 A6NN06 94 aa12.02□□□□□ -0.49
CBLN3-201ENST00000267406 KMT2CQ8NEZ4 4911 aaKnown RBP11.98□□□□□ -0.49
CBLN3-201ENST00000267406 ACYP2P14621 99 aa11.97□□□□□ -0.49
CBLN3-201ENST00000267406 DMAC1Q96GE9 116 aa11.95□□□□□ -0.5
CBLN3-201ENST00000267406 IGKV2D-30A0A075B6S6 120 aa11.93□□□□□ -0.5
CBLN3-201ENST00000267406 RBM12B-AS1Q9P1G2 102 aa11.92□□□□□ -0.5
CBLN3-201ENST00000267406 KRTAP10-4P60372 401 aaPredicted RBP11.92□□□□□ -0.5
CBLN3-201ENST00000267406 RPS29P62273 56 aaKnown RBP11.92□□□□□ -0.5
CBLN3-201ENST00000267406 APOBP04114 4563 aaKnown RBP11.9□□□□□ -0.5
CBLN3-201ENST00000267406 RYR2Q92736 4967 aa11.88□□□□□ -0.51
CBLN3-201ENST00000267406 FAT1Q14517 4588 aa11.86□□□□□ -0.51
CBLN3-201ENST00000267406 SPINK7P58062 85 aa11.85□□□□□ -0.51
CBLN3-201ENST00000267406 C7orf65Q6ZTY9 151 aa11.81□□□□□ -0.52
CBLN3-201ENST00000267406 PKHD1L1Q86WI1 4243 aa11.79□□□□□ -0.52
CBLN3-201ENST00000267406 C9orf92A6NGG3 77 aa11.77□□□□□ -0.52
CBLN3-201ENST00000267406 RYR3Q15413 4870 aa11.69□□□□□ -0.54
CBLN3-201ENST00000267406 A8MUU9 505 aa11.66□□□□□ -0.54
CBLN3-201ENST00000267406 C20orf166-AS1Q96NR2 134 aa11.65□□□□□ -0.54
CBLN3-201ENST00000267406 Q8N1X5 172 aa11.64□□□□□ -0.55
CBLN3-201ENST00000267406 A0A1B0GU69 56 aa11.59□□□□□ -0.55
CBLN3-201ENST00000267406 FLG2Q5D862 2391 aaPredicted RBP11.52□□□□□ -0.57
CBLN3-201ENST00000267406 Q5VSD8 79 aa11.48□□□□□ -0.57
CBLN3-201ENST00000267406 SPATA8Q6RVD6 105 aa11.47□□□□□ -0.57
CBLN3-201ENST00000267406 KRTAP10-8P60410 259 aa11.45□□□□□ -0.58
CBLN3-201ENST00000267406 LRP1Q07954 4544 aaKnown RBP11.44□□□□□ -0.58
CBLN3-201ENST00000267406 TNXBP22105 4242 aa11.43□□□□□ -0.58
CBLN3-201ENST00000267406 PRAC1Q96KF2 57 aa11.43□□□□□ -0.58
CBLN3-201ENST00000267406 HSPG2P98160 4391 aa11.42□□□□□ -0.58
CBLN3-201ENST00000267406 KRTAP3-1Q9BYR8 98 aa11.42□□□□□ -0.58
CBLN3-201ENST00000267406 FAT3Q8TDW7 4589 aa11.42□□□□□ -0.58
CBLN3-201ENST00000267406 ADM2Q7Z4H4 148 aa11.38□□□□□ -0.59
CBLN3-201ENST00000267406 KRTAP17-1Q9BYP8 105 aa11.36□□□□□ -0.59
CBLN3-201ENST00000267406 UQCR11O14957 56 aa11.33□□□□□ -0.6
CBLN3-201ENST00000267406 MIR22HGQ0VDD5 57 aa11.31□□□□□ -0.6
CBLN3-201ENST00000267406 RYR1P21817 5038 aa11.28□□□□□ -0.6
CBLN3-201ENST00000267406 EPPK1P58107 5090 aaKnown RBP11.28□□□□□ -0.6
CBLN3-201ENST00000267406 LINC01554Q52M75 96 aa11.25□□□□□ -0.61
CBLN3-201ENST00000267406 COX6B2Q6YFQ2 88 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms