RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 PP632Q6XCG6 107 aa6.24□□□□□ -1.41
CHFR-201ENST00000266880 P0C880 135 aa6.24□□□□□ -1.41
CHFR-201ENST00000266880 COL12A1Q99715 3063 aa6.23□□□□□ -1.41
CHFR-201ENST00000266880 WDFY4Q6ZS81 3184 aa6.19□□□□□ -1.42
CHFR-201ENST00000266880 MKI67P46013 3256 aaKnown RBP6.16□□□□□ -1.42
CHFR-201ENST00000266880 RANBP2P49792 3224 aaKnown RBP6.16□□□□□ -1.42
CHFR-201ENST00000266880 ZANQ9Y493 2812 aa6.15□□□□□ -1.43
CHFR-201ENST00000266880 TNRC18O15417 2968 aaPredicted RBP6.12□□□□□ -1.43
CHFR-201ENST00000266880 KRTAP10-8P60410 259 aa6.12□□□□□ -1.43
CHFR-201ENST00000266880 VWFP04275 2813 aa6.12□□□□□ -1.43
CHFR-201ENST00000266880 KRTAP13-2Q52LG2 175 aa6.11□□□□□ -1.43
CHFR-201ENST00000266880 H0YAA0 97 aa6.11□□□□□ -1.43
CHFR-201ENST00000266880 DCHS2Q6V1P9 2916 aa6.08□□□□□ -1.44
CHFR-201ENST00000266880 RPS29P62273 56 aaKnown RBP6.08□□□□□ -1.44
CHFR-201ENST00000266880 ZZEF1O43149 2961 aa6.08□□□□□ -1.44
CHFR-201ENST00000266880 FBN2P35556 2912 aa6.06□□□□□ -1.44
CHFR-201ENST00000266880 CELSR3Q9NYQ7 3312 aa6.05□□□□□ -1.44
CHFR-201ENST00000266880 KRTAP7-1Q8IUC3 87 aa6.04□□□□□ -1.44
CHFR-201ENST00000266880 USP34Q70CQ2 3546 aa6.04□□□□□ -1.44
CHFR-201ENST00000266880 HTTP42858 3142 aa6.03□□□□□ -1.44
CHFR-201ENST00000266880 PKD1L1Q8TDX9 2849 aa6.03□□□□□ -1.44
CHFR-201ENST00000266880 Q6ZRN7 208 aaPredicted RBP6.02□□□□□ -1.44
CHFR-201ENST00000266880 LAMA3Q16787 3333 aa6.01□□□□□ -1.45
CHFR-201ENST00000266880 REV3LO60673 3130 aa6□□□□□ -1.45
CHFR-201ENST00000266880 BRCA2P51587 3418 aa6□□□□□ -1.45
CHFR-201ENST00000266880 LAMA1P25391 3075 aa5.99□□□□□ -1.45
CHFR-201ENST00000266880 COL6A3P12111 3177 aa5.97□□□□□ -1.45
CHFR-201ENST00000266880 KRTAP13-1Q8IUC0 172 aa5.97□□□□□ -1.45
CHFR-201ENST00000266880 DNAH14Q0VDD8 3507 aa5.97□□□□□ -1.45
CHFR-201ENST00000266880 A0A1B0GVY2 172 aa5.97□□□□□ -1.45
CHFR-201ENST00000266880 UNC80Q8N2C7 3258 aa5.97□□□□□ -1.45
CHFR-201ENST00000266880 ZFHX3Q15911 3703 aa5.96□□□□□ -1.45
CHFR-201ENST00000266880 TENM4Q6N022 2769 aa5.94□□□□□ -1.46
CHFR-201ENST00000266880 ADGRG4Q8IZF6 3080 aa5.93□□□□□ -1.46
CHFR-201ENST00000266880 BOD1L1Q8NFC6 3051 aa5.92□□□□□ -1.46
CHFR-201ENST00000266880 ATMQ13315 3056 aa5.89□□□□□ -1.47
CHFR-201ENST00000266880 MXRA5Q9NR99 2828 aa5.88□□□□□ -1.47
CHFR-201ENST00000266880 CELSR1Q9NYQ6 3014 aa5.87□□□□□ -1.47
CHFR-201ENST00000266880 DMXL1Q9Y485 3027 aa5.86□□□□□ -1.47
CHFR-201ENST00000266880 CDH23Q9H251 3354 aa5.85□□□□□ -1.47
CHFR-201ENST00000266880 HRNRQ86YZ3 2850 aaPredicted RBP5.84□□□□□ -1.47
CHFR-201ENST00000266880 VCANP13611 3396 aa5.79□□□□□ -1.48
CHFR-201ENST00000266880 XP32Q5T750 250 aa5.78□□□□□ -1.48
CHFR-201ENST00000266880 TENM2Q9NT68 2774 aa5.78□□□□□ -1.48
CHFR-201ENST00000266880 KRTAP10-10P60014 251 aa5.77□□□□□ -1.49
CHFR-201ENST00000266880 TPRXLQ17RH7 258 aa5.75□□□□□ -1.49
CHFR-201ENST00000266880 PRO2289Q9P1D8 64 aa5.75□□□□□ -1.49
CHFR-201ENST00000266880 INE1O15225 51 aa5.74□□□□□ -1.49
CHFR-201ENST00000266880 KRTAP12-2P59991 146 aa5.72□□□□□ -1.49
CHFR-201ENST00000266880 KRTAP15-1Q3LI76 137 aa5.71□□□□□ -1.49
CHFR-201ENST00000266880 CFAP47Q6ZTR5 3102 aa5.71□□□□□ -1.5
CHFR-201ENST00000266880 COL7A1Q02388 2944 aa5.7□□□□□ -1.5
CHFR-201ENST00000266880 KRTAP23-1A1A580 65 aa5.68□□□□□ -1.5
CHFR-201ENST00000266880 SPEGQ15772 3267 aa5.64□□□□□ -1.51
CHFR-201ENST00000266880 WDFY3Q8IZQ1 3526 aa5.63□□□□□ -1.51
CHFR-201ENST00000266880 KRTAP1-4P0C5Y4 121 aa5.6□□□□□ -1.51
CHFR-201ENST00000266880 SPTBN5Q9NRC6 3674 aaKnown RBP5.6□□□□□ -1.51
CHFR-201ENST00000266880 KRTAP13-4Q3LI77 160 aa5.59□□□□□ -1.51
CHFR-201ENST00000266880 MYO15AQ9UKN7 3530 aa5.59□□□□□ -1.52
CHFR-201ENST00000266880 MEGF8Q7Z7M0 2845 aa5.55□□□□□ -1.52
CHFR-201ENST00000266880 SZT2Q5T011 3432 aa5.54□□□□□ -1.52
CHFR-201ENST00000266880 EYSQ5T1H1 3165 aa5.51□□□□□ -1.53
CHFR-201ENST00000266880 FBN3Q75N90 2809 aa5.5□□□□□ -1.53
CHFR-201ENST00000266880 KRTAP12-1P59990 96 aa5.5□□□□□ -1.53
CHFR-201ENST00000266880 KRTAP13-3Q3SY46 172 aa5.48□□□□□ -1.53
CHFR-201ENST00000266880 NBPF19A0A087WUL8 3843 aa5.42□□□□□ -1.54
CHFR-201ENST00000266880 ZFHX4Q86UP3 3567 aa5.42□□□□□ -1.54
CHFR-201ENST00000266880 OTOGQ6ZRI0 2925 aa5.42□□□□□ -1.54
CHFR-201ENST00000266880 FBN1P35555 2871 aaKnown RBP5.41□□□□□ -1.54
CHFR-201ENST00000266880 ASPMQ8IZT6 3477 aa5.41□□□□□ -1.54
CHFR-201ENST00000266880 SMG1Q96Q15 3661 aaKnown RBP5.39□□□□□ -1.55
CHFR-201ENST00000266880 LAMA5O15230 3695 aa5.38□□□□□ -1.55
CHFR-201ENST00000266880 SPENQ96T58 3664 aaKnown RBP5.36□□□□□ -1.55
CHFR-201ENST00000266880 RELNP78509 3460 aa5.33□□□□□ -1.56
CHFR-201ENST00000266880 DMDP11532 3685 aa5.31□□□□□ -1.56
CHFR-201ENST00000266880 LOC400499M0QZD8 3231 aa5.29□□□□□ -1.56
CHFR-201ENST00000266880 CRCT1Q9UGL9 99 aa5.27□□□□□ -1.57
CHFR-201ENST00000266880 KRTAP3-1Q9BYR8 98 aa5.2□□□□□ -1.58
CHFR-201ENST00000266880 CSMD1Q96PZ7 3565 aa5.19□□□□□ -1.58
CHFR-201ENST00000266880 KRTAP21-3Q3LHN1 58 aa5.16□□□□□ -1.58
CHFR-201ENST00000266880 DCHS1Q96JQ0 3298 aa5.15□□□□□ -1.58
CHFR-201ENST00000266880 KRTAP10-6P60371 365 aaPredicted RBP5.15□□□□□ -1.58
CHFR-201ENST00000266880 VPS13CQ709C8 3753 aa5.1□□□□□ -1.59
CHFR-201ENST00000266880 ALMS1Q8TCU4 4167 aa5.09□□□□□ -1.59
CHFR-201ENST00000266880 KRTAP10-12P60413 245 aa5.08□□□□□ -1.6
CHFR-201ENST00000266880 AKAP9Q99996 3911 aa5.02□□□□□ -1.61
CHFR-201ENST00000266880 CUBNO60494 3623 aa5.01□□□□□ -1.61
CHFR-201ENST00000266880 TRRAPQ9Y4A5 3859 aa4.98□□□□□ -1.61
CHFR-201ENST00000266880 SVEP1Q4LDE5 3571 aa4.97□□□□□ -1.61
CHFR-201ENST00000266880 MUC3AQ02505 3323 aa4.97□□□□□ -1.61
CHFR-201ENST00000266880 KRTAP12-3P60328 96 aa4.95□□□□□ -1.62
CHFR-201ENST00000266880 KRTAP10-5P60370 271 aa4.94□□□□□ -1.62
CHFR-201ENST00000266880 KRTAP3-2Q9BYR7 98 aa4.93□□□□□ -1.62
CHFR-201ENST00000266880 LCE3AQ5TA76 89 aa4.87□□□□□ -1.63
CHFR-201ENST00000266880 CSMD3Q7Z407 3707 aa4.84□□□□□ -1.63
CHFR-201ENST00000266880 KRTAP3-3Q9BYR6 98 aa4.84□□□□□ -1.64
CHFR-201ENST00000266880 LYSTQ99698 3801 aa4.7□□□□□ -1.66
CHFR-201ENST00000266880 CSMD2Q7Z408 3487 aa4.7□□□□□ -1.66
CHFR-201ENST00000266880 BSNQ9UPA5 3926 aa4.69□□□□□ -1.66
CHFR-201ENST00000266880 DNAH3Q8TD57 4116 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms