RNA–Protein interactions for RNA: ENST00000266674.9

LGR5-201, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LGR5, Length 4,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-201ENST00000266674 ROMO1P60602 79 aa8.05□□□□□ -1.12
LGR5-201ENST00000266674 CAMK2N1Q7Z7J9 78 aa8.04□□□□□ -1.12
LGR5-201ENST00000266674 KRTAP10-2P60368 255 aa8.04□□□□□ -1.12
LGR5-201ENST00000266674 KRTAP10-1P60331 282 aa8.04□□□□□ -1.12
LGR5-201ENST00000266674 USP34Q70CQ2 3546 aa8.02□□□□□ -1.13
LGR5-201ENST00000266674 DCHS2Q6V1P9 2916 aa8.01□□□□□ -1.13
LGR5-201ENST00000266674 LOC400499M0QZD8 3231 aa8.01□□□□□ -1.13
LGR5-201ENST00000266674 TNRC18O15417 2968 aaPredicted RBP8□□□□□ -1.13
LGR5-201ENST00000266674 DMXL1Q9Y485 3027 aa7.99□□□□□ -1.13
LGR5-201ENST00000266674 HRNRQ86YZ3 2850 aaPredicted RBP7.97□□□□□ -1.13
LGR5-201ENST00000266674 ADM2Q7Z4H4 148 aa7.97□□□□□ -1.13
LGR5-201ENST00000266674 KRTAP13-1Q8IUC0 172 aa7.97□□□□□ -1.13
LGR5-201ENST00000266674 NF1P21359 2839 aa7.96□□□□□ -1.13
LGR5-201ENST00000266674 FBN2P35556 2912 aa7.96□□□□□ -1.14
LGR5-201ENST00000266674 Q6ZRN7 208 aaPredicted RBP7.94□□□□□ -1.14
LGR5-201ENST00000266674 KMT2BQ9UMN6 2715 aaPredicted RBP7.94□□□□□ -1.14
LGR5-201ENST00000266674 R4GN34 69 aa7.93□□□□□ -1.14
LGR5-201ENST00000266674 KRTAP25-1Q3LHN0 102 aa7.88□□□□□ -1.15
LGR5-201ENST00000266674 WDFY3Q8IZQ1 3526 aa7.86□□□□□ -1.15
LGR5-201ENST00000266674 A0A0A0MQY5 61 aa7.84□□□□□ -1.15
LGR5-201ENST00000266674 KRTAP13-2Q52LG2 175 aa7.83□□□□□ -1.16
LGR5-201ENST00000266674 M0QZ58 72 aa7.8□□□□□ -1.16
LGR5-201ENST00000266674 CRYBG3Q68DQ2 2970 aa7.78□□□□□ -1.16
LGR5-201ENST00000266674 RPS29P62273 56 aaKnown RBP7.77□□□□□ -1.17
LGR5-201ENST00000266674 MUC3AQ02505 3323 aa7.76□□□□□ -1.17
LGR5-201ENST00000266674 Q5VSD8 79 aa7.75□□□□□ -1.17
LGR5-201ENST00000266674 TENM4Q6N022 2769 aa7.74□□□□□ -1.17
LGR5-201ENST00000266674 MXRA5Q9NR99 2828 aa7.74□□□□□ -1.17
LGR5-201ENST00000266674 SEC61BP60468 96 aaKnown RBP7.72□□□□□ -1.17
LGR5-201ENST00000266674 ASPMQ8IZT6 3477 aa7.7□□□□□ -1.18
LGR5-201ENST00000266674 DMDP11532 3685 aa7.68□□□□□ -1.18
LGR5-201ENST00000266674 M0R2T5 61 aa7.66□□□□□ -1.18
LGR5-201ENST00000266674 DCHS1Q96JQ0 3298 aa7.65□□□□□ -1.18
LGR5-201ENST00000266674 KRTAP16-1A8MUX0 517 aa7.64□□□□□ -1.19
LGR5-201ENST00000266674 LAMA5O15230 3695 aa7.63□□□□□ -1.19
LGR5-201ENST00000266674 NDUFAF8A1L188 74 aa7.61□□□□□ -1.19
LGR5-201ENST00000266674 ZFHX4Q86UP3 3567 aa7.6□□□□□ -1.19
LGR5-201ENST00000266674 A8MUU9 505 aa7.6□□□□□ -1.19
LGR5-201ENST00000266674 CELSR1Q9NYQ6 3014 aa7.6□□□□□ -1.19
LGR5-201ENST00000266674 RELNP78509 3460 aa7.59□□□□□ -1.19
LGR5-201ENST00000266674 TENM3Q9P273 2699 aa7.59□□□□□ -1.2
LGR5-201ENST00000266674 C20orf166-AS1Q96NR2 134 aa7.55□□□□□ -1.2
LGR5-201ENST00000266674 TGP01266 2768 aa7.5□□□□□ -1.21
LGR5-201ENST00000266674 H0YAA0 97 aa7.49□□□□□ -1.21
LGR5-201ENST00000266674 KRTAP1-4P0C5Y4 121 aa7.47□□□□□ -1.21
LGR5-201ENST00000266674 TENM1Q9UKZ4 2725 aa7.47□□□□□ -1.21
LGR5-201ENST00000266674 PDZD2O15018 2839 aa7.45□□□□□ -1.22
LGR5-201ENST00000266674 PLAC4Q8WY50 150 aa7.41□□□□□ -1.22
LGR5-201ENST00000266674 C10orf95Q9H7T3 257 aa7.39□□□□□ -1.23
LGR5-201ENST00000266674 SMG1Q96Q15 3661 aaKnown RBP7.38□□□□□ -1.23
LGR5-201ENST00000266674 CSMD1Q96PZ7 3565 aa7.37□□□□□ -1.23
LGR5-201ENST00000266674 KRTAP13-3Q3SY46 172 aa7.36□□□□□ -1.23
LGR5-201ENST00000266674 PKD1L1Q8TDX9 2849 aa7.3□□□□□ -1.24
LGR5-201ENST00000266674 VWFP04275 2813 aa7.27□□□□□ -1.25
LGR5-201ENST00000266674 XP32Q5T750 250 aa7.25□□□□□ -1.25
LGR5-201ENST00000266674 TNP1P09430 55 aa7.24□□□□□ -1.25
LGR5-201ENST00000266674 FBN1P35555 2871 aaKnown RBP7.23□□□□□ -1.25
LGR5-201ENST00000266674 SVEP1Q4LDE5 3571 aa7.23□□□□□ -1.25
LGR5-201ENST00000266674 TENM2Q9NT68 2774 aa7.23□□□□□ -1.25
LGR5-201ENST00000266674 P0C880 135 aa7.23□□□□□ -1.25
LGR5-201ENST00000266674 PP632Q6XCG6 107 aa7.19□□□□□ -1.26
LGR5-201ENST00000266674 CUBNO60494 3623 aa7.11□□□□□ -1.27
LGR5-201ENST00000266674 KRTAP10-8P60410 259 aa7.07□□□□□ -1.28
LGR5-201ENST00000266674 SPENQ96T58 3664 aaKnown RBP7.05□□□□□ -1.28
LGR5-201ENST00000266674 SRRM2Q9UQ35 2752 aaKnown RBP7.02□□□□□ -1.29
LGR5-201ENST00000266674 OTOGQ6ZRI0 2925 aa7.02□□□□□ -1.29
LGR5-201ENST00000266674 FBN3Q75N90 2809 aa7.01□□□□□ -1.29
LGR5-201ENST00000266674 TPRXLQ17RH7 258 aa7□□□□□ -1.29
LGR5-201ENST00000266674 KRTAP21-3Q3LHN1 58 aa6.97□□□□□ -1.29
LGR5-201ENST00000266674 KRTAP12-2P59991 146 aa6.95□□□□□ -1.3
LGR5-201ENST00000266674 KRTAP3-1Q9BYR8 98 aa6.94□□□□□ -1.3
LGR5-201ENST00000266674 A0A1B0GVY2 172 aa6.9□□□□□ -1.3
LGR5-201ENST00000266674 MEGF8Q7Z7M0 2845 aa6.9□□□□□ -1.31
LGR5-201ENST00000266674 NBPF19A0A087WUL8 3843 aa6.9□□□□□ -1.31
LGR5-201ENST00000266674 BSNQ9UPA5 3926 aa6.89□□□□□ -1.31
LGR5-201ENST00000266674 CSMD2Q7Z408 3487 aa6.88□□□□□ -1.31
LGR5-201ENST00000266674 KRTAP12-1P59990 96 aa6.86□□□□□ -1.31
LGR5-201ENST00000266674 ZFHX3Q15911 3703 aa6.83□□□□□ -1.32
LGR5-201ENST00000266674 COL7A1Q02388 2944 aa6.8□□□□□ -1.32
LGR5-201ENST00000266674 KRTAP10-6P60371 365 aaPredicted RBP6.77□□□□□ -1.33
LGR5-201ENST00000266674 KRTAP13-4Q3LI77 160 aa6.77□□□□□ -1.33
LGR5-201ENST00000266674 TRRAPQ9Y4A5 3859 aa6.72□□□□□ -1.33
LGR5-201ENST00000266674 KRTAP10-10P60014 251 aa6.68□□□□□ -1.34
LGR5-201ENST00000266674 ANK3Q12955 4377 aaKnown RBP6.68□□□□□ -1.34
LGR5-201ENST00000266674 VPS13CQ709C8 3753 aa6.63□□□□□ -1.35
LGR5-201ENST00000266674 PRO2289Q9P1D8 64 aa6.54□□□□□ -1.36
LGR5-201ENST00000266674 KRTAP3-2Q9BYR7 98 aa6.54□□□□□ -1.36
LGR5-201ENST00000266674 KRTAP15-1Q3LI76 137 aa6.52□□□□□ -1.37
LGR5-201ENST00000266674 KRTAP3-3Q9BYR6 98 aa6.51□□□□□ -1.37
LGR5-201ENST00000266674 ZNF469Q96JG9 3925 aaPredicted RBP6.4□□□□□ -1.38
LGR5-201ENST00000266674 MT1HL1P0DM35 61 aa6.3□□□□□ -1.4
LGR5-201ENST00000266674 HUWE1Q7Z6Z7 4374 aaKnown RBP6.3□□□□□ -1.4
LGR5-201ENST00000266674 CSMD3Q7Z407 3707 aa6.29□□□□□ -1.4
LGR5-201ENST00000266674 KRTAP10-4P60372 401 aaPredicted RBP6.28□□□□□ -1.4
LGR5-201ENST00000266674 AKAP9Q99996 3911 aa6.16□□□□□ -1.42
LGR5-201ENST00000266674 INE1O15225 51 aa6.13□□□□□ -1.43
LGR5-201ENST00000266674 LORP23490 312 aaPredicted RBP6.04□□□□□ -1.44
LGR5-201ENST00000266674 KRTAP23-1A1A580 65 aa6.03□□□□□ -1.44
LGR5-201ENST00000266674 KRTAP10-12P60413 245 aa6□□□□□ -1.45
LGR5-201ENST00000266674 DNAH5Q8TE73 4624 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms