RNA–Protein interactions for RNA: ENST00000265641.9

CPT1A-201, Transcript of carnitine palmitoyltransferase 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPT1A, Length 5,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-201ENST00000265641 TACC2O95359 2948 aa6.09□□□□□ -1.43
CPT1A-201ENST00000265641 KRTAP13-1Q8IUC0 172 aa6.08□□□□□ -1.44
CPT1A-201ENST00000265641 PLAC4Q8WY50 150 aa6.06□□□□□ -1.44
CPT1A-201ENST00000265641 APCP25054 2843 aa6.06□□□□□ -1.44
CPT1A-201ENST00000265641 LRBAP50851 2863 aa6.05□□□□□ -1.44
CPT1A-201ENST00000265641 BOD1L1Q8NFC6 3051 aa6.05□□□□□ -1.44
CPT1A-201ENST00000265641 DMXL2Q8TDJ6 3036 aa6.05□□□□□ -1.44
CPT1A-201ENST00000265641 DMXL1Q9Y485 3027 aa6.03□□□□□ -1.44
CPT1A-201ENST00000265641 ATMQ13315 3056 aa6.01□□□□□ -1.45
CPT1A-201ENST00000265641 PP632Q6XCG6 107 aa6.01□□□□□ -1.45
CPT1A-201ENST00000265641 IGSF10Q6WRI0 2623 aa6□□□□□ -1.45
CPT1A-201ENST00000265641 NSD1Q96L73 2696 aaPredicted RBP6□□□□□ -1.45
CPT1A-201ENST00000265641 FLNCQ14315 2725 aa5.99□□□□□ -1.45
CPT1A-201ENST00000265641 ZZEF1O43149 2961 aa5.99□□□□□ -1.45
CPT1A-201ENST00000265641 WDFY3Q8IZQ1 3526 aa5.99□□□□□ -1.45
CPT1A-201ENST00000265641 LOC400499M0QZD8 3231 aa5.98□□□□□ -1.45
CPT1A-201ENST00000265641 UTP20O75691 2785 aaKnown RBP5.97□□□□□ -1.45
CPT1A-201ENST00000265641 H0YAA0 97 aa5.97□□□□□ -1.45
CPT1A-201ENST00000265641 DMDP11532 3685 aa5.96□□□□□ -1.45
CPT1A-201ENST00000265641 P0C880 135 aa5.95□□□□□ -1.46
CPT1A-201ENST00000265641 NIPBLQ6KC79 2804 aaeCLIP5.92□□□□□ -1.46
CPT1A-201ENST00000265641 CFAP47Q6ZTR5 3102 aa5.92□□□□□ -1.46
CPT1A-201ENST00000265641 COL12A1Q99715 3063 aa5.91□□□□□ -1.46
CPT1A-201ENST00000265641 KRTAP10-1P60331 282 aa5.91□□□□□ -1.46
CPT1A-201ENST00000265641 ITPR2Q14571 2701 aa5.9□□□□□ -1.46
CPT1A-201ENST00000265641 Q6ZRN7 208 aaPredicted RBP5.9□□□□□ -1.47
CPT1A-201ENST00000265641 HIVEP1P15822 2718 aa5.89□□□□□ -1.47
CPT1A-201ENST00000265641 KRTAP10-2P60368 255 aa5.89□□□□□ -1.47
CPT1A-201ENST00000265641 MUC3AQ02505 3323 aa5.89□□□□□ -1.47
CPT1A-201ENST00000265641 CELSR2Q9HCU4 2923 aa5.88□□□□□ -1.47
CPT1A-201ENST00000265641 KRTAP23-1A1A580 65 aa5.88□□□□□ -1.47
CPT1A-201ENST00000265641 ZANQ9Y493 2812 aa5.87□□□□□ -1.47
CPT1A-201ENST00000265641 KRTAP13-2Q52LG2 175 aa5.85□□□□□ -1.47
CPT1A-201ENST00000265641 HRNRQ86YZ3 2850 aaPredicted RBP5.85□□□□□ -1.47
CPT1A-201ENST00000265641 LCE2BO14633 110 aa5.81□□□□□ -1.48
CPT1A-201ENST00000265641 KMT2BQ9UMN6 2715 aaPredicted RBP5.81□□□□□ -1.48
CPT1A-201ENST00000265641 LCE2CQ5TA81 110 aa5.8□□□□□ -1.48
CPT1A-201ENST00000265641 KRTAP13-3Q3SY46 172 aa5.8□□□□□ -1.48
CPT1A-201ENST00000265641 C10orf95Q9H7T3 257 aa5.8□□□□□ -1.48
CPT1A-201ENST00000265641 DCHS2Q6V1P9 2916 aa5.77□□□□□ -1.49
CPT1A-201ENST00000265641 TNP1P09430 55 aa5.77□□□□□ -1.49
CPT1A-201ENST00000265641 LAMA5O15230 3695 aa5.77□□□□□ -1.49
CPT1A-201ENST00000265641 FBN2P35556 2912 aa5.75□□□□□ -1.49
CPT1A-201ENST00000265641 ASPMQ8IZT6 3477 aa5.75□□□□□ -1.49
CPT1A-201ENST00000265641 NF1P21359 2839 aa5.74□□□□□ -1.49
CPT1A-201ENST00000265641 ZFHX4Q86UP3 3567 aa5.74□□□□□ -1.49
CPT1A-201ENST00000265641 KRTAP21-3Q3LHN1 58 aa5.71□□□□□ -1.5
CPT1A-201ENST00000265641 RELNP78509 3460 aa5.71□□□□□ -1.5
CPT1A-201ENST00000265641 DCHS1Q96JQ0 3298 aa5.67□□□□□ -1.5
CPT1A-201ENST00000265641 Q5VSD8 79 aa5.64□□□□□ -1.51
CPT1A-201ENST00000265641 BSNQ9UPA5 3926 aa5.64□□□□□ -1.51
CPT1A-201ENST00000265641 SMG1Q96Q15 3661 aaKnown RBP5.62□□□□□ -1.51
CPT1A-201ENST00000265641 MXRA5Q9NR99 2828 aa5.62□□□□□ -1.51
CPT1A-201ENST00000265641 TGP01266 2768 aa5.6□□□□□ -1.51
CPT1A-201ENST00000265641 M0R2T5 61 aa5.59□□□□□ -1.52
CPT1A-201ENST00000265641 KRTAP1-4P0C5Y4 121 aa5.58□□□□□ -1.52
CPT1A-201ENST00000265641 CRYBG3Q68DQ2 2970 aa5.57□□□□□ -1.52
CPT1A-201ENST00000265641 TPRXLQ17RH7 258 aa5.57□□□□□ -1.52
CPT1A-201ENST00000265641 SPENQ96T58 3664 aaKnown RBP5.54□□□□□ -1.52
CPT1A-201ENST00000265641 LCE2AQ5TA79 106 aaPredicted RBP5.54□□□□□ -1.52
CPT1A-201ENST00000265641 KRTAP10-8P60410 259 aa5.53□□□□□ -1.52
CPT1A-201ENST00000265641 KRTAP15-1Q3LI76 137 aa5.53□□□□□ -1.52
CPT1A-201ENST00000265641 TENM3Q9P273 2699 aa5.52□□□□□ -1.53
CPT1A-201ENST00000265641 PDZD2O15018 2839 aa5.49□□□□□ -1.53
CPT1A-201ENST00000265641 CELSR1Q9NYQ6 3014 aa5.49□□□□□ -1.53
CPT1A-201ENST00000265641 CSMD1Q96PZ7 3565 aa5.48□□□□□ -1.53
CPT1A-201ENST00000265641 TENM4Q6N022 2769 aa5.47□□□□□ -1.53
CPT1A-201ENST00000265641 INE1O15225 51 aa5.45□□□□□ -1.54
CPT1A-201ENST00000265641 ANK3Q12955 4377 aaKnown RBP5.44□□□□□ -1.54
CPT1A-201ENST00000265641 KRTAP12-2P59991 146 aa5.42□□□□□ -1.54
CPT1A-201ENST00000265641 KRTAP13-4Q3LI77 160 aa5.41□□□□□ -1.54
CPT1A-201ENST00000265641 SVEP1Q4LDE5 3571 aa5.4□□□□□ -1.55
CPT1A-201ENST00000265641 LORP23490 312 aaPredicted RBP5.4□□□□□ -1.55
CPT1A-201ENST00000265641 KRTAP12-1P59990 96 aa5.4□□□□□ -1.55
CPT1A-201ENST00000265641 XP32Q5T750 250 aa5.39□□□□□ -1.55
CPT1A-201ENST00000265641 TENM1Q9UKZ4 2725 aa5.38□□□□□ -1.55
CPT1A-201ENST00000265641 PRO2289Q9P1D8 64 aa5.35□□□□□ -1.55
CPT1A-201ENST00000265641 NBPF19A0A087WUL8 3843 aa5.32□□□□□ -1.56
CPT1A-201ENST00000265641 CSMD2Q7Z408 3487 aa5.28□□□□□ -1.56
CPT1A-201ENST00000265641 KRTAP3-1Q9BYR8 98 aa5.27□□□□□ -1.57
CPT1A-201ENST00000265641 PKD1L1Q8TDX9 2849 aa5.27□□□□□ -1.57
CPT1A-201ENST00000265641 TENM2Q9NT68 2774 aa5.26□□□□□ -1.57
CPT1A-201ENST00000265641 KRTAP10-6P60371 365 aaPredicted RBP5.25□□□□□ -1.57
CPT1A-201ENST00000265641 CUBNO60494 3623 aa5.24□□□□□ -1.57
CPT1A-201ENST00000265641 VWFP04275 2813 aa5.24□□□□□ -1.57
CPT1A-201ENST00000265641 OTOGQ6ZRI0 2925 aa5.24□□□□□ -1.57
CPT1A-201ENST00000265641 VPS13CQ709C8 3753 aa5.2□□□□□ -1.58
CPT1A-201ENST00000265641 SRRM2Q9UQ35 2752 aaKnown RBP5.15□□□□□ -1.58
CPT1A-201ENST00000265641 ZFHX3Q15911 3703 aa5.13□□□□□ -1.59
CPT1A-201ENST00000265641 FBN3Q75N90 2809 aa5.12□□□□□ -1.59
CPT1A-201ENST00000265641 FBN1P35555 2871 aaKnown RBP5.12□□□□□ -1.59
CPT1A-201ENST00000265641 A0A1B0GVY2 172 aa5.12□□□□□ -1.59
CPT1A-201ENST00000265641 ZNF469Q96JG9 3925 aaPredicted RBP5.09□□□□□ -1.59
CPT1A-201ENST00000265641 AKAP9Q99996 3911 aa5.08□□□□□ -1.6
CPT1A-201ENST00000265641 MEGF8Q7Z7M0 2845 aa5.07□□□□□ -1.6
CPT1A-201ENST00000265641 TRRAPQ9Y4A5 3859 aa5.04□□□□□ -1.6
CPT1A-201ENST00000265641 HUWE1Q7Z6Z7 4374 aaKnown RBP5.04□□□□□ -1.6
CPT1A-201ENST00000265641 ALMS1Q8TCU4 4167 aa4.95□□□□□ -1.62
CPT1A-201ENST00000265641 COL7A1Q02388 2944 aa4.93□□□□□ -1.62
CPT1A-201ENST00000265641 KRTAP10-10P60014 251 aa4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms