RNA–Protein interactions for RNA: ENST00000265379.10

COL6A5-201, Transcript of collagen type VI alpha 5 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A5, Length 9,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-201ENST00000265379 DMXL2Q8TDJ6 3036 aa4.86□□□□□ -1.63
COL6A5-201ENST00000265379 TGP01266 2768 aa4.85□□□□□ -1.63
COL6A5-201ENST00000265379 OXTP01178 125 aa4.85□□□□□ -1.63
COL6A5-201ENST00000265379 COL12A1Q99715 3063 aa4.84□□□□□ -1.64
COL6A5-201ENST00000265379 NOTCH2NLQ7Z3S9 236 aa4.82□□□□□ -1.64
COL6A5-201ENST00000265379 ADM2Q7Z4H4 148 aa4.8□□□□□ -1.64
COL6A5-201ENST00000265379 MKI67P46013 3256 aaKnown RBP4.79□□□□□ -1.64
COL6A5-201ENST00000265379 KRTAP10-1P60331 282 aa4.79□□□□□ -1.64
COL6A5-201ENST00000265379 C10orf95Q9H7T3 257 aa4.78□□□□□ -1.64
COL6A5-201ENST00000265379 PANO1I0J062 215 aa4.78□□□□□ -1.64
COL6A5-201ENST00000265379 DCHS2Q6V1P9 2916 aa4.77□□□□□ -1.65
COL6A5-201ENST00000265379 CYSTM1Q9H1C7 97 aa4.77□□□□□ -1.65
COL6A5-201ENST00000265379 P0C880 135 aa4.77□□□□□ -1.65
COL6A5-201ENST00000265379 ADGRG4Q8IZF6 3080 aa4.77□□□□□ -1.65
COL6A5-201ENST00000265379 USP34Q70CQ2 3546 aa4.77□□□□□ -1.65
COL6A5-201ENST00000265379 VWFP04275 2813 aa4.76□□□□□ -1.65
COL6A5-201ENST00000265379 EYSQ5T1H1 3165 aa4.76□□□□□ -1.65
COL6A5-201ENST00000265379 KRTAP7-1Q8IUC3 87 aa4.75□□□□□ -1.65
COL6A5-201ENST00000265379 LAMA1P25391 3075 aa4.74□□□□□ -1.65
COL6A5-201ENST00000265379 KRTAP10-2P60368 255 aa4.74□□□□□ -1.65
COL6A5-201ENST00000265379 DMXL1Q9Y485 3027 aa4.72□□□□□ -1.65
COL6A5-201ENST00000265379 FBN2P35556 2912 aa4.72□□□□□ -1.65
COL6A5-201ENST00000265379 BOD1L1Q8NFC6 3051 aa4.71□□□□□ -1.65
COL6A5-201ENST00000265379 TENM2Q9NT68 2774 aa4.71□□□□□ -1.66
COL6A5-201ENST00000265379 BRCA2P51587 3418 aa4.7□□□□□ -1.66
COL6A5-201ENST00000265379 TNP1P09430 55 aa4.7□□□□□ -1.66
COL6A5-201ENST00000265379 A8MUU9 505 aa4.69□□□□□ -1.66
COL6A5-201ENST00000265379 OTOGQ6ZRI0 2925 aa4.66□□□□□ -1.66
COL6A5-201ENST00000265379 SPTBN5Q9NRC6 3674 aaKnown RBP4.65□□□□□ -1.67
COL6A5-201ENST00000265379 REV3LO60673 3130 aa4.65□□□□□ -1.67
COL6A5-201ENST00000265379 KRTAP13-2Q52LG2 175 aa4.64□□□□□ -1.67
COL6A5-201ENST00000265379 CDH23Q9H251 3354 aa4.63□□□□□ -1.67
COL6A5-201ENST00000265379 XIRP2A4UGR9 3374 aa4.63□□□□□ -1.67
COL6A5-201ENST00000265379 KRTAP11-1Q8IUC1 163 aa4.6□□□□□ -1.67
COL6A5-201ENST00000265379 SZT2Q5T011 3432 aa4.59□□□□□ -1.67
COL6A5-201ENST00000265379 COL7A1Q02388 2944 aa4.59□□□□□ -1.67
COL6A5-201ENST00000265379 PKD1L1Q8TDX9 2849 aa4.58□□□□□ -1.68
COL6A5-201ENST00000265379 KRTAP1-4P0C5Y4 121 aa4.58□□□□□ -1.68
COL6A5-201ENST00000265379 FREM2Q5SZK8 3169 aa4.57□□□□□ -1.68
COL6A5-201ENST00000265379 UNC80Q8N2C7 3258 aa4.56□□□□□ -1.68
COL6A5-201ENST00000265379 TPRXLQ17RH7 258 aa4.56□□□□□ -1.68
COL6A5-201ENST00000265379 CELSR1Q9NYQ6 3014 aa4.55□□□□□ -1.68
COL6A5-201ENST00000265379 A8MU10 97 aa4.54□□□□□ -1.68
COL6A5-201ENST00000265379 A0A1B0GVY2 172 aa4.47□□□□□ -1.69
COL6A5-201ENST00000265379 VCANP13611 3396 aa4.46□□□□□ -1.7
COL6A5-201ENST00000265379 PRO2289Q9P1D8 64 aa4.46□□□□□ -1.7
COL6A5-201ENST00000265379 COL6A3P12111 3177 aa4.45□□□□□ -1.7
COL6A5-201ENST00000265379 MEGF8Q7Z7M0 2845 aa4.45□□□□□ -1.7
COL6A5-201ENST00000265379 KRTAP13-3Q3SY46 172 aa4.43□□□□□ -1.7
COL6A5-201ENST00000265379 DNAH14Q0VDD8 3507 aa4.43□□□□□ -1.7
COL6A5-201ENST00000265379 INE1O15225 51 aa4.42□□□□□ -1.7
COL6A5-201ENST00000265379 CELSR3Q9NYQ7 3312 aa4.4□□□□□ -1.7
COL6A5-201ENST00000265379 KRTAP10-8P60410 259 aa4.4□□□□□ -1.71
COL6A5-201ENST00000265379 XP32Q5T750 250 aa4.4□□□□□ -1.71
COL6A5-201ENST00000265379 ZFHX3Q15911 3703 aa4.37□□□□□ -1.71
COL6A5-201ENST00000265379 H0YAA0 97 aa4.37□□□□□ -1.71
COL6A5-201ENST00000265379 FBN1P35555 2871 aaKnown RBP4.37□□□□□ -1.71
COL6A5-201ENST00000265379 NBPF19A0A087WUL8 3843 aa4.36□□□□□ -1.71
COL6A5-201ENST00000265379 KRTAP23-1A1A580 65 aa4.35□□□□□ -1.71
COL6A5-201ENST00000265379 FBN3Q75N90 2809 aa4.32□□□□□ -1.72
COL6A5-201ENST00000265379 LOC400499M0QZD8 3231 aa4.3□□□□□ -1.72
COL6A5-201ENST00000265379 CFAP47Q6ZTR5 3102 aa4.27□□□□□ -1.73
COL6A5-201ENST00000265379 SPENQ96T58 3664 aaKnown RBP4.25□□□□□ -1.73
COL6A5-201ENST00000265379 KRTAP10-10P60014 251 aa4.22□□□□□ -1.73
COL6A5-201ENST00000265379 ALMS1Q8TCU4 4167 aa4.22□□□□□ -1.73
COL6A5-201ENST00000265379 WDFY3Q8IZQ1 3526 aa4.19□□□□□ -1.74
COL6A5-201ENST00000265379 SPEGQ15772 3267 aa4.17□□□□□ -1.74
COL6A5-201ENST00000265379 AKAP9Q99996 3911 aa4.15□□□□□ -1.74
COL6A5-201ENST00000265379 CRCT1Q9UGL9 99 aa4.15□□□□□ -1.75
COL6A5-201ENST00000265379 MYO15AQ9UKN7 3530 aa4.13□□□□□ -1.75
COL6A5-201ENST00000265379 ZFHX4Q86UP3 3567 aa4.13□□□□□ -1.75
COL6A5-201ENST00000265379 ANK3Q12955 4377 aaKnown RBP4.11□□□□□ -1.75
COL6A5-201ENST00000265379 DMDP11532 3685 aa4.11□□□□□ -1.75
COL6A5-201ENST00000265379 KRTAP10-4P60372 401 aaPredicted RBP4.1□□□□□ -1.75
COL6A5-201ENST00000265379 LAMA5O15230 3695 aa4.07□□□□□ -1.76
COL6A5-201ENST00000265379 KRTAP12-2P59991 146 aa4.07□□□□□ -1.76
COL6A5-201ENST00000265379 BSNQ9UPA5 3926 aa4.07□□□□□ -1.76
COL6A5-201ENST00000265379 KRTAP13-4Q3LI77 160 aa4.06□□□□□ -1.76
COL6A5-201ENST00000265379 VPS13CQ709C8 3753 aa4.06□□□□□ -1.76
COL6A5-201ENST00000265379 TRRAPQ9Y4A5 3859 aa4.05□□□□□ -1.76
COL6A5-201ENST00000265379 DCHS1Q96JQ0 3298 aa4.04□□□□□ -1.76
COL6A5-201ENST00000265379 HUWE1Q7Z6Z7 4374 aaKnown RBP4.03□□□□□ -1.76
COL6A5-201ENST00000265379 ANK2Q01484 3957 aa4.02□□□□□ -1.77
COL6A5-201ENST00000265379 SMG1Q96Q15 3661 aaKnown RBP4.02□□□□□ -1.77
COL6A5-201ENST00000265379 MT1HL1P0DM35 61 aa4□□□□□ -1.77
COL6A5-201ENST00000265379 RELNP78509 3460 aa3.99□□□□□ -1.77
COL6A5-201ENST00000265379 ASPMQ8IZT6 3477 aa3.99□□□□□ -1.77
COL6A5-201ENST00000265379 DNAH3Q8TD57 4116 aa3.97□□□□□ -1.77
COL6A5-201ENST00000265379 DNAH6Q9C0G6 4158 aa3.97□□□□□ -1.77
COL6A5-201ENST00000265379 KRTAP3-1Q9BYR8 98 aa3.96□□□□□ -1.78
COL6A5-201ENST00000265379 CUBNO60494 3623 aa3.95□□□□□ -1.78
COL6A5-201ENST00000265379 KRTAP15-1Q3LI76 137 aa3.93□□□□□ -1.78
COL6A5-201ENST00000265379 DNAH1Q9P2D7 4330 aa3.89□□□□□ -1.79
COL6A5-201ENST00000265379 KRTAP10-6P60371 365 aaPredicted RBP3.89□□□□□ -1.79
COL6A5-201ENST00000265379 MUC3AQ02505 3323 aa3.88□□□□□ -1.79
COL6A5-201ENST00000265379 KRTAP12-1P59990 96 aa3.87□□□□□ -1.79
COL6A5-201ENST00000265379 LYSTQ99698 3801 aa3.86□□□□□ -1.79
COL6A5-201ENST00000265379 CSMD1Q96PZ7 3565 aa3.84□□□□□ -1.79
COL6A5-201ENST00000265379 SVEP1Q4LDE5 3571 aa3.83□□□□□ -1.8
COL6A5-201ENST00000265379 DNAH10Q8IVF4 4471 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms