RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 ADGRG4Q8IZF6 3080 aa3.26□□□□□ -1.89
XRN1-201ENST00000264951 SMG1Q96Q15 3661 aaKnown RBP3.25□□□□□ -1.89
XRN1-201ENST00000264951 Q8NDZ9 215 aa3.24□□□□□ -1.89
XRN1-201ENST00000264951 MAP1AP78559 2803 aaPredicted RBP3.24□□□□□ -1.89
XRN1-201ENST00000264951 NDUFAF8A1L188 74 aa3.24□□□□□ -1.89
XRN1-201ENST00000264951 DCHS2Q6V1P9 2916 aa3.22□□□□□ -1.89
XRN1-201ENST00000264951 ADM2Q7Z4H4 148 aa3.22□□□□□ -1.89
XRN1-201ENST00000264951 C20orf166-AS1Q96NR2 134 aa3.22□□□□□ -1.89
XRN1-201ENST00000264951 TNP1P09430 55 aa3.22□□□□□ -1.89
XRN1-201ENST00000264951 NOTCH2NLQ7Z3S9 236 aa3.22□□□□□ -1.89
XRN1-201ENST00000264951 KRTAP4-16G5E9R7 235 aaPredicted RBP3.21□□□□□ -1.89
XRN1-201ENST00000264951 KMT2BQ9UMN6 2715 aaPredicted RBP3.21□□□□□ -1.9
XRN1-201ENST00000264951 ASH1LQ9NR48 2969 aaKnown RBP3.2□□□□□ -1.9
XRN1-201ENST00000264951 COL12A1Q99715 3063 aa3.19□□□□□ -1.9
XRN1-201ENST00000264951 KRTAP11-1Q8IUC1 163 aa3.18□□□□□ -1.9
XRN1-201ENST00000264951 KRTAP10-3P60369 221 aa3.17□□□□□ -1.9
XRN1-201ENST00000264951 HRNRQ86YZ3 2850 aaPredicted RBP3.17□□□□□ -1.9
XRN1-201ENST00000264951 TACC2O95359 2948 aa3.16□□□□□ -1.9
XRN1-201ENST00000264951 A8MUU9 505 aa3.16□□□□□ -1.9
XRN1-201ENST00000264951 UTP20O75691 2785 aaKnown RBP3.16□□□□□ -1.9
XRN1-201ENST00000264951 ITPR2Q14571 2701 aa3.15□□□□□ -1.91
XRN1-201ENST00000264951 LRBAP50851 2863 aa3.15□□□□□ -1.91
XRN1-201ENST00000264951 KRTAP1-1Q07627 177 aa3.13□□□□□ -1.91
XRN1-201ENST00000264951 FBN2P35556 2912 aa3.12□□□□□ -1.91
XRN1-201ENST00000264951 SVEP1Q4LDE5 3571 aa3.12□□□□□ -1.91
XRN1-201ENST00000264951 Q5VSD8 79 aa3.12□□□□□ -1.91
XRN1-201ENST00000264951 KRTAP1-3Q8IUG1 177 aa3.11□□□□□ -1.91
XRN1-201ENST00000264951 CSMD1Q96PZ7 3565 aa3.1□□□□□ -1.91
XRN1-201ENST00000264951 UBR5O95071 2799 aaPredicted RBP3.09□□□□□ -1.91
XRN1-201ENST00000264951 C10orf95Q9H7T3 257 aa3.09□□□□□ -1.91
XRN1-201ENST00000264951 KRTAP21-3Q3LHN1 58 aa3.09□□□□□ -1.91
XRN1-201ENST00000264951 BSNQ9UPA5 3926 aa3.09□□□□□ -1.91
XRN1-201ENST00000264951 CRYBG3Q68DQ2 2970 aa3.09□□□□□ -1.91
XRN1-201ENST00000264951 P0C880 135 aa3.09□□□□□ -1.92
XRN1-201ENST00000264951 CELSR2Q9HCU4 2923 aa3.08□□□□□ -1.92
XRN1-201ENST00000264951 CELSR1Q9NYQ6 3014 aa3.08□□□□□ -1.92
XRN1-201ENST00000264951 ZANQ9Y493 2812 aa3.07□□□□□ -1.92
XRN1-201ENST00000264951 Q6ZRN7 208 aaPredicted RBP3.07□□□□□ -1.92
XRN1-201ENST00000264951 A8MU10 97 aa3.06□□□□□ -1.92
XRN1-201ENST00000264951 KRTAP1-5Q9BYS1 174 aa3.06□□□□□ -1.92
XRN1-201ENST00000264951 NBEAL2Q6ZNJ1 2754 aa3.06□□□□□ -1.92
XRN1-201ENST00000264951 TENM3Q9P273 2699 aa3.06□□□□□ -1.92
XRN1-201ENST00000264951 CSMD2Q7Z408 3487 aa3.05□□□□□ -1.92
XRN1-201ENST00000264951 TENM4Q6N022 2769 aa3.05□□□□□ -1.92
XRN1-201ENST00000264951 KRTAP10-1P60331 282 aa3.05□□□□□ -1.92
XRN1-201ENST00000264951 APCP25054 2843 aa3.03□□□□□ -1.92
XRN1-201ENST00000264951 KRTAP13-1Q8IUC0 172 aa3.03□□□□□ -1.92
XRN1-201ENST00000264951 HIVEP1P15822 2718 aa3.03□□□□□ -1.92
XRN1-201ENST00000264951 NIPBLQ6KC79 2804 aaeCLIP3.03□□□□□ -1.923e-7■■■■■ 27.8
XRN1-201ENST00000264951 PRO2289Q9P1D8 64 aa3.01□□□□□ -1.93
XRN1-201ENST00000264951 KRTAP10-2P60368 255 aa2.99□□□□□ -1.93
XRN1-201ENST00000264951 MXRA5Q9NR99 2828 aa2.97□□□□□ -1.93
XRN1-201ENST00000264951 KRTAP13-2Q52LG2 175 aa2.95□□□□□ -1.94
XRN1-201ENST00000264951 VPS13CQ709C8 3753 aa2.95□□□□□ -1.94
XRN1-201ENST00000264951 H0YAA0 97 aa2.94□□□□□ -1.94
XRN1-201ENST00000264951 NF1P21359 2839 aa2.94□□□□□ -1.94
XRN1-201ENST00000264951 CUBNO60494 3623 aa2.94□□□□□ -1.94
XRN1-201ENST00000264951 PDZD2O15018 2839 aa2.91□□□□□ -1.94
XRN1-201ENST00000264951 KRTAP10-8P60410 259 aa2.91□□□□□ -1.94
XRN1-201ENST00000264951 OTOGQ6ZRI0 2925 aa2.9□□□□□ -1.94
XRN1-201ENST00000264951 VWFP04275 2813 aa2.89□□□□□ -1.95
XRN1-201ENST00000264951 ZFHX3Q15911 3703 aa2.89□□□□□ -1.95
XRN1-201ENST00000264951 INE1O15225 51 aa2.89□□□□□ -1.95
XRN1-201ENST00000264951 TPRXLQ17RH7 258 aa2.89□□□□□ -1.95
XRN1-201ENST00000264951 TENM1Q9UKZ4 2725 aa2.89□□□□□ -1.95
XRN1-201ENST00000264951 KRTAP7-1Q8IUC3 87 aa2.88□□□□□ -1.95
XRN1-201ENST00000264951 TGP01266 2768 aa2.87□□□□□ -1.95
XRN1-201ENST00000264951 XP32Q5T750 250 aa2.85□□□□□ -1.95
XRN1-201ENST00000264951 KRTAP13-4Q3LI77 160 aa2.83□□□□□ -1.96
XRN1-201ENST00000264951 ZNF469Q96JG9 3925 aaPredicted RBP2.83□□□□□ -1.96
XRN1-201ENST00000264951 ANK3Q12955 4377 aaKnown RBP2.83□□□□□ -1.96
XRN1-201ENST00000264951 NBPF19A0A087WUL8 3843 aa2.8□□□□□ -1.96
XRN1-201ENST00000264951 KRTAP1-4P0C5Y4 121 aa2.79□□□□□ -1.96
XRN1-201ENST00000264951 PKD1L1Q8TDX9 2849 aa2.79□□□□□ -1.96
XRN1-201ENST00000264951 FBN1P35555 2871 aaKnown RBP2.78□□□□□ -1.96
XRN1-201ENST00000264951 FBN3Q75N90 2809 aa2.76□□□□□ -1.97
XRN1-201ENST00000264951 KRTAP10-10P60014 251 aa2.76□□□□□ -1.97
XRN1-201ENST00000264951 AKAP9Q99996 3911 aa2.75□□□□□ -1.97
XRN1-201ENST00000264951 DNHD1Q96M86 4753 aa2.75□□□□□ -1.97
XRN1-201ENST00000264951 KRTAP13-3Q3SY46 172 aa2.75□□□□□ -1.97
XRN1-201ENST00000264951 TENM2Q9NT68 2774 aa2.73□□□□□ -1.97
XRN1-201ENST00000264951 KRTAP12-2P59991 146 aa2.72□□□□□ -1.97
XRN1-201ENST00000264951 KRTAP12-1P59990 96 aa2.69□□□□□ -1.98
XRN1-201ENST00000264951 KRTAP23-1A1A580 65 aa2.69□□□□□ -1.98
XRN1-201ENST00000264951 TRRAPQ9Y4A5 3859 aa2.67□□□□□ -1.98
XRN1-201ENST00000264951 MEGF8Q7Z7M0 2845 aa2.67□□□□□ -1.98
XRN1-201ENST00000264951 KRTAP15-1Q3LI76 137 aa2.66□□□□□ -1.98
XRN1-201ENST00000264951 SRRM2Q9UQ35 2752 aaKnown RBP2.62□□□□□ -1.99
XRN1-201ENST00000264951 A0A1B0GVY2 172 aa2.62□□□□□ -1.99
XRN1-201ENST00000264951 COL7A1Q02388 2944 aa2.56□□□□□ -2
XRN1-201ENST00000264951 KRTAP10-6P60371 365 aaPredicted RBP2.54□□□□□ -2
XRN1-201ENST00000264951 PLECQ15149 4684 aaKnown RBP2.54□□□□□ -2
XRN1-201ENST00000264951 HYDINQ4G0P3 5121 aa2.53□□□□□ -2.01
XRN1-201ENST00000264951 DNAH10Q8IVF4 4471 aa2.52□□□□□ -2.01
XRN1-201ENST00000264951 STARD9Q9P2P6 4700 aa2.51□□□□□ -2.01
XRN1-201ENST00000264951 HUWE1Q7Z6Z7 4374 aaKnown RBP2.51□□□□□ -2.01
XRN1-201ENST00000264951 KRTAP3-1Q9BYR8 98 aa2.5□□□□□ -2.01
XRN1-201ENST00000264951 KRTAP10-12P60413 245 aa2.5□□□□□ -2.01
XRN1-201ENST00000264951 DNAH9Q9NYC9 4486 aa2.49□□□□□ -2.01
XRN1-201ENST00000264951 DNAH1Q9P2D7 4330 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms