RNA–Protein interactions for RNA: ENST00000263519.4

ATP2B3-201, Transcript of ATPase plasma membrane Ca2+ transporting 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATP2B3, Length 6,420 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3-201ENST00000263519 STAB2Q8WWQ8 2551 aa6.88□□□□□ -1.31
ATP2B3-201ENST00000263519 KRTAP13-4Q3LI77 160 aa6.88□□□□□ -1.31
ATP2B3-201ENST00000263519 KMT2BQ9UMN6 2715 aaPredicted RBP6.87□□□□□ -1.31
ATP2B3-201ENST00000263519 COL6A5A8TX70 2615 aa6.87□□□□□ -1.31
ATP2B3-201ENST00000263519 APCP25054 2843 aa6.85□□□□□ -1.31
ATP2B3-201ENST00000263519 VCANP13611 3396 aa6.85□□□□□ -1.31
ATP2B3-201ENST00000263519 ITPR2Q14571 2701 aa6.85□□□□□ -1.31
ATP2B3-201ENST00000263519 KRTAP12-1P59990 96 aa6.83□□□□□ -1.32
ATP2B3-201ENST00000263519 SPTBN5Q9NRC6 3674 aaKnown RBP6.83□□□□□ -1.32
ATP2B3-201ENST00000263519 CFAP47Q6ZTR5 3102 aa6.79□□□□□ -1.32
ATP2B3-201ENST00000263519 KRTAP15-1Q3LI76 137 aa6.77□□□□□ -1.33
ATP2B3-201ENST00000263519 ZNF292O60281 2723 aa6.76□□□□□ -1.33
ATP2B3-201ENST00000263519 LAMA1P25391 3075 aa6.76□□□□□ -1.33
ATP2B3-201ENST00000263519 BAHCC1Q9P281 2608 aa6.75□□□□□ -1.33
ATP2B3-201ENST00000263519 USP34Q70CQ2 3546 aa6.73□□□□□ -1.33
ATP2B3-201ENST00000263519 CRYBG3Q68DQ2 2970 aa6.73□□□□□ -1.33
ATP2B3-201ENST00000263519 NOTCH1P46531 2555 aa6.72□□□□□ -1.33
ATP2B3-201ENST00000263519 IGSF10Q6WRI0 2623 aa6.72□□□□□ -1.33
ATP2B3-201ENST00000263519 ZZEF1O43149 2961 aa6.71□□□□□ -1.34
ATP2B3-201ENST00000263519 DSPP15924 2871 aaKnown RBP6.69□□□□□ -1.34
ATP2B3-201ENST00000263519 KRTAP3-1Q9BYR8 98 aa6.67□□□□□ -1.34
ATP2B3-201ENST00000263519 NSD1Q96L73 2696 aaPredicted RBP6.67□□□□□ -1.34
ATP2B3-201ENST00000263519 UTP20O75691 2785 aaKnown RBP6.65□□□□□ -1.34
ATP2B3-201ENST00000263519 SPEGQ15772 3267 aa6.65□□□□□ -1.34
ATP2B3-201ENST00000263519 HIVEP1P15822 2718 aa6.65□□□□□ -1.35
ATP2B3-201ENST00000263519 MAP1AP78559 2803 aaPredicted RBP6.62□□□□□ -1.35
ATP2B3-201ENST00000263519 UBR5O95071 2799 aaPredicted RBP6.61□□□□□ -1.35
ATP2B3-201ENST00000263519 BOD1L1Q8NFC6 3051 aa6.6□□□□□ -1.35
ATP2B3-201ENST00000263519 ASH1LQ9NR48 2969 aaKnown RBP6.59□□□□□ -1.35
ATP2B3-201ENST00000263519 ATMQ13315 3056 aa6.58□□□□□ -1.36
ATP2B3-201ENST00000263519 ITPR1Q14643 2758 aa6.57□□□□□ -1.36
ATP2B3-201ENST00000263519 DMXL2Q8TDJ6 3036 aa6.55□□□□□ -1.36
ATP2B3-201ENST00000263519 ADGRG4Q8IZF6 3080 aa6.54□□□□□ -1.36
ATP2B3-201ENST00000263519 CRCT1Q9UGL9 99 aa6.53□□□□□ -1.36
ATP2B3-201ENST00000263519 FRYLO94915 3013 aa6.53□□□□□ -1.36
ATP2B3-201ENST00000263519 ASPMQ8IZT6 3477 aa6.53□□□□□ -1.36
ATP2B3-201ENST00000263519 DCHS1Q96JQ0 3298 aa6.53□□□□□ -1.36
ATP2B3-201ENST00000263519 EYSQ5T1H1 3165 aa6.5□□□□□ -1.37
ATP2B3-201ENST00000263519 TACC2O95359 2948 aa6.49□□□□□ -1.37
ATP2B3-201ENST00000263519 COL12A1Q99715 3063 aa6.49□□□□□ -1.37
ATP2B3-201ENST00000263519 KRTAP10-6P60371 365 aaPredicted RBP6.48□□□□□ -1.37
ATP2B3-201ENST00000263519 NBEAQ8NFP9 2946 aa6.47□□□□□ -1.37
ATP2B3-201ENST00000263519 MYO15AQ9UKN7 3530 aa6.43□□□□□ -1.38
ATP2B3-201ENST00000263519 INE1O15225 51 aa6.38□□□□□ -1.39
ATP2B3-201ENST00000263519 TGP01266 2768 aa6.38□□□□□ -1.39
ATP2B3-201ENST00000263519 WDFY3Q8IZQ1 3526 aa6.38□□□□□ -1.39
ATP2B3-201ENST00000263519 TNRC18O15417 2968 aaPredicted RBP6.37□□□□□ -1.39
ATP2B3-201ENST00000263519 CSMD1Q96PZ7 3565 aa6.34□□□□□ -1.4
ATP2B3-201ENST00000263519 HRNRQ86YZ3 2850 aaPredicted RBP6.33□□□□□ -1.4
ATP2B3-201ENST00000263519 KRTAP10-12P60413 245 aa6.33□□□□□ -1.4
ATP2B3-201ENST00000263519 ZFHX4Q86UP3 3567 aa6.32□□□□□ -1.4
ATP2B3-201ENST00000263519 NBPF19A0A087WUL8 3843 aa6.32□□□□□ -1.4
ATP2B3-201ENST00000263519 LOC400499M0QZD8 3231 aa6.32□□□□□ -1.4
ATP2B3-201ENST00000263519 CELSR2Q9HCU4 2923 aa6.29□□□□□ -1.4
ATP2B3-201ENST00000263519 CELSR1Q9NYQ6 3014 aa6.24□□□□□ -1.41
ATP2B3-201ENST00000263519 DCHS2Q6V1P9 2916 aa6.23□□□□□ -1.41
ATP2B3-201ENST00000263519 TENM2Q9NT68 2774 aa6.23□□□□□ -1.41
ATP2B3-201ENST00000263519 ANK3Q12955 4377 aaKnown RBP6.22□□□□□ -1.41
ATP2B3-201ENST00000263519 KRTAP3-3Q9BYR6 98 aa6.22□□□□□ -1.41
ATP2B3-201ENST00000263519 KRTAP3-2Q9BYR7 98 aa6.22□□□□□ -1.41
ATP2B3-201ENST00000263519 TENM4Q6N022 2769 aa6.2□□□□□ -1.42
ATP2B3-201ENST00000263519 DMXL1Q9Y485 3027 aa6.17□□□□□ -1.42
ATP2B3-201ENST00000263519 LAMA5O15230 3695 aa6.16□□□□□ -1.42
ATP2B3-201ENST00000263519 LCE3AQ5TA76 89 aa6.15□□□□□ -1.42
ATP2B3-201ENST00000263519 RELNP78509 3460 aa6.13□□□□□ -1.43
ATP2B3-201ENST00000263519 KRTAP12-3P60328 96 aa6.12□□□□□ -1.43
ATP2B3-201ENST00000263519 FLNCQ14315 2725 aa6.12□□□□□ -1.43
ATP2B3-201ENST00000263519 MT1HL1P0DM35 61 aa6.11□□□□□ -1.43
ATP2B3-201ENST00000263519 NF1P21359 2839 aa6.1□□□□□ -1.43
ATP2B3-201ENST00000263519 NIPBLQ6KC79 2804 aaeCLIP6.1□□□□□ -1.43
ATP2B3-201ENST00000263519 FBN2P35556 2912 aa6.09□□□□□ -1.43
ATP2B3-201ENST00000263519 TENM1Q9UKZ4 2725 aa6.09□□□□□ -1.43
ATP2B3-201ENST00000263519 HUWE1Q7Z6Z7 4374 aaKnown RBP6.08□□□□□ -1.44
ATP2B3-201ENST00000263519 ALMS1Q8TCU4 4167 aa6.07□□□□□ -1.44
ATP2B3-201ENST00000263519 SMG1Q96Q15 3661 aaKnown RBP6.05□□□□□ -1.44
ATP2B3-201ENST00000263519 ZANQ9Y493 2812 aa6.02□□□□□ -1.45
ATP2B3-201ENST00000263519 KRTAP4-5Q9BYR2 181 aa5.99□□□□□ -1.45
ATP2B3-201ENST00000263519 KRTAP10-5P60370 271 aa5.98□□□□□ -1.45
ATP2B3-201ENST00000263519 LORP23490 312 aaPredicted RBP5.97□□□□□ -1.45
ATP2B3-201ENST00000263519 MXRA5Q9NR99 2828 aa5.95□□□□□ -1.46
ATP2B3-201ENST00000263519 TENM3Q9P273 2699 aa5.93□□□□□ -1.46
ATP2B3-201ENST00000263519 SPENQ96T58 3664 aaKnown RBP5.9□□□□□ -1.47
ATP2B3-201ENST00000263519 KRTAP23-1A1A580 65 aa5.89□□□□□ -1.47
ATP2B3-201ENST00000263519 SVEP1Q4LDE5 3571 aa5.89□□□□□ -1.47
ATP2B3-201ENST00000263519 DMDP11532 3685 aa5.88□□□□□ -1.47
ATP2B3-201ENST00000263519 KRTAP10-4P60372 401 aaPredicted RBP5.85□□□□□ -1.47
ATP2B3-201ENST00000263519 AKAP9Q99996 3911 aa5.84□□□□□ -1.47
ATP2B3-201ENST00000263519 KRTAP8-1Q8IUC2 63 aa5.82□□□□□ -1.48
ATP2B3-201ENST00000263519 PDZD2O15018 2839 aa5.77□□□□□ -1.49
ATP2B3-201ENST00000263519 VWFP04275 2813 aa5.74□□□□□ -1.49
ATP2B3-201ENST00000263519 BSNQ9UPA5 3926 aa5.72□□□□□ -1.49
ATP2B3-201ENST00000263519 VPS13CQ709C8 3753 aa5.71□□□□□ -1.49
ATP2B3-201ENST00000263519 ZFHX3Q15911 3703 aa5.7□□□□□ -1.5
ATP2B3-201ENST00000263519 TRRAPQ9Y4A5 3859 aa5.69□□□□□ -1.5
ATP2B3-201ENST00000263519 PKD1L1Q8TDX9 2849 aa5.67□□□□□ -1.5
ATP2B3-201ENST00000263519 CSMD2Q7Z408 3487 aa5.65□□□□□ -1.5
ATP2B3-201ENST00000263519 MEGF8Q7Z7M0 2845 aa5.64□□□□□ -1.51
ATP2B3-201ENST00000263519 FBN1P35555 2871 aaKnown RBP5.58□□□□□ -1.52
ATP2B3-201ENST00000263519 FBN3Q75N90 2809 aa5.57□□□□□ -1.52
ATP2B3-201ENST00000263519 CUBNO60494 3623 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms