RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 SPTBN5Q9NRC6 3674 aaKnown RBP8.72□□□□□ -1.01
SHANK3-201ENST00000262795 RPS29P62273 56 aaKnown RBP8.71□□□□□ -1.01
SHANK3-201ENST00000262795 WDFY3Q8IZQ1 3526 aa8.68□□□□□ -1.02
SHANK3-201ENST00000262795 MAP1AP78559 2803 aaPredicted RBP8.68□□□□□ -1.02
SHANK3-201ENST00000262795 IGSF10Q6WRI0 2623 aa8.67□□□□□ -1.02
SHANK3-201ENST00000262795 KRTAP7-1Q8IUC3 87 aa8.64□□□□□ -1.03
SHANK3-201ENST00000262795 DMXL2Q8TDJ6 3036 aa8.62□□□□□ -1.03
SHANK3-201ENST00000262795 KALRNO60229 2985 aa8.6□□□□□ -1.03
SHANK3-201ENST00000262795 XP32Q5T750 250 aa8.59□□□□□ -1.03
SHANK3-201ENST00000262795 TRANK1O15050 2925 aa8.58□□□□□ -1.04
SHANK3-201ENST00000262795 LRBAP50851 2863 aa8.56□□□□□ -1.04
SHANK3-201ENST00000262795 KMT2BQ9UMN6 2715 aaPredicted RBP8.56□□□□□ -1.04
SHANK3-201ENST00000262795 TACC2O95359 2948 aa8.56□□□□□ -1.04
SHANK3-201ENST00000262795 FRYLO94915 3013 aa8.54□□□□□ -1.04
SHANK3-201ENST00000262795 EYSQ5T1H1 3165 aa8.53□□□□□ -1.04
SHANK3-201ENST00000262795 UBR5O95071 2799 aaPredicted RBP8.53□□□□□ -1.04
SHANK3-201ENST00000262795 BOD1L1Q8NFC6 3051 aa8.52□□□□□ -1.05
SHANK3-201ENST00000262795 ATMQ13315 3056 aa8.5□□□□□ -1.05
SHANK3-201ENST00000262795 ASPMQ8IZT6 3477 aa8.49□□□□□ -1.05
SHANK3-201ENST00000262795 NSD1Q96L73 2696 aaPredicted RBP8.49□□□□□ -1.05
SHANK3-201ENST00000262795 COL12A1Q99715 3063 aa8.48□□□□□ -1.05
SHANK3-201ENST00000262795 PRO2289Q9P1D8 64 aa8.47□□□□□ -1.05
SHANK3-201ENST00000262795 CSMD1Q96PZ7 3565 aa8.45□□□□□ -1.06
SHANK3-201ENST00000262795 NBPF19A0A087WUL8 3843 aa8.45□□□□□ -1.06
SHANK3-201ENST00000262795 KRTAP13-1Q8IUC0 172 aa8.45□□□□□ -1.06
SHANK3-201ENST00000262795 UTP20O75691 2785 aaKnown RBP8.44□□□□□ -1.06
SHANK3-201ENST00000262795 APCP25054 2843 aa8.43□□□□□ -1.06
SHANK3-201ENST00000262795 HIVEP1P15822 2718 aa8.41□□□□□ -1.06
SHANK3-201ENST00000262795 ZZEF1O43149 2961 aa8.4□□□□□ -1.06
SHANK3-201ENST00000262795 ASH1LQ9NR48 2969 aaKnown RBP8.37□□□□□ -1.07
SHANK3-201ENST00000262795 TPRXLQ17RH7 258 aa8.37□□□□□ -1.07
SHANK3-201ENST00000262795 ITPR1Q14643 2758 aa8.36□□□□□ -1.07
SHANK3-201ENST00000262795 TENM4Q6N022 2769 aa8.33□□□□□ -1.08
SHANK3-201ENST00000262795 NBEAQ8NFP9 2946 aa8.32□□□□□ -1.08
SHANK3-201ENST00000262795 ZFHX4Q86UP3 3567 aa8.32□□□□□ -1.08
SHANK3-201ENST00000262795 KRTAP1-4P0C5Y4 121 aa8.31□□□□□ -1.08
SHANK3-201ENST00000262795 P0C880 135 aa8.3□□□□□ -1.08
SHANK3-201ENST00000262795 H0YAA0 97 aa8.28□□□□□ -1.08
SHANK3-201ENST00000262795 LOC400499M0QZD8 3231 aa8.28□□□□□ -1.08
SHANK3-201ENST00000262795 LAMA5O15230 3695 aa8.28□□□□□ -1.08
SHANK3-201ENST00000262795 ADGRG4Q8IZF6 3080 aa8.26□□□□□ -1.09
SHANK3-201ENST00000262795 TNRC18O15417 2968 aaPredicted RBP8.25□□□□□ -1.09
SHANK3-201ENST00000262795 FLNCQ14315 2725 aa8.23□□□□□ -1.09
SHANK3-201ENST00000262795 PP632Q6XCG6 107 aa8.21□□□□□ -1.1
SHANK3-201ENST00000262795 KRTAP13-3Q3SY46 172 aa8.17□□□□□ -1.1
SHANK3-201ENST00000262795 DMXL1Q9Y485 3027 aa8.16□□□□□ -1.1
SHANK3-201ENST00000262795 TENM2Q9NT68 2774 aa8.13□□□□□ -1.11
SHANK3-201ENST00000262795 CELSR2Q9HCU4 2923 aa8.11□□□□□ -1.11
SHANK3-201ENST00000262795 TENM1Q9UKZ4 2725 aa8.09□□□□□ -1.11
SHANK3-201ENST00000262795 DMDP11532 3685 aa8.09□□□□□ -1.11
SHANK3-201ENST00000262795 RELNP78509 3460 aa8.06□□□□□ -1.12
SHANK3-201ENST00000262795 SMG1Q96Q15 3661 aaKnown RBP8.05□□□□□ -1.12
SHANK3-201ENST00000262795 DCHS2Q6V1P9 2916 aa7.99□□□□□ -1.13
SHANK3-201ENST00000262795 CRCT1Q9UGL9 99 aa7.95□□□□□ -1.14
SHANK3-201ENST00000262795 CELSR1Q9NYQ6 3014 aa7.94□□□□□ -1.14
SHANK3-201ENST00000262795 ZFHX3Q15911 3703 aa7.88□□□□□ -1.15
SHANK3-201ENST00000262795 SVEP1Q4LDE5 3571 aa7.87□□□□□ -1.15
SHANK3-201ENST00000262795 SPENQ96T58 3664 aaKnown RBP7.87□□□□□ -1.15
SHANK3-201ENST00000262795 NF1P21359 2839 aa7.84□□□□□ -1.16
SHANK3-201ENST00000262795 PKD1L1Q8TDX9 2849 aa7.83□□□□□ -1.16
SHANK3-201ENST00000262795 KRTAP12-2P59991 146 aa7.8□□□□□ -1.16
SHANK3-201ENST00000262795 VWFP04275 2813 aa7.77□□□□□ -1.17
SHANK3-201ENST00000262795 NIPBLQ6KC79 2804 aaeCLIP7.75□□□□□ -1.17
SHANK3-201ENST00000262795 TENM3Q9P273 2699 aa7.73□□□□□ -1.17
SHANK3-201ENST00000262795 FBN2P35556 2912 aa7.68□□□□□ -1.18
SHANK3-201ENST00000262795 ZANQ9Y493 2812 aa7.66□□□□□ -1.18
SHANK3-201ENST00000262795 KRTAP15-1Q3LI76 137 aa7.65□□□□□ -1.19
SHANK3-201ENST00000262795 CUBNO60494 3623 aa7.63□□□□□ -1.19
SHANK3-201ENST00000262795 KRTAP4-5Q9BYR2 181 aa7.6□□□□□ -1.19
SHANK3-201ENST00000262795 HRNRQ86YZ3 2850 aaPredicted RBP7.56□□□□□ -1.2
SHANK3-201ENST00000262795 CSMD2Q7Z408 3487 aa7.49□□□□□ -1.21
SHANK3-201ENST00000262795 TGP01266 2768 aa7.49□□□□□ -1.21
SHANK3-201ENST00000262795 PDZD2O15018 2839 aa7.47□□□□□ -1.21
SHANK3-201ENST00000262795 KRTAP12-1P59990 96 aa7.46□□□□□ -1.21
SHANK3-201ENST00000262795 KRTAP13-4Q3LI77 160 aa7.44□□□□□ -1.22
SHANK3-201ENST00000262795 LORP23490 312 aaPredicted RBP7.44□□□□□ -1.22
SHANK3-201ENST00000262795 VPS13CQ709C8 3753 aa7.4□□□□□ -1.22
SHANK3-201ENST00000262795 MUC3AQ02505 3323 aa7.4□□□□□ -1.23
SHANK3-201ENST00000262795 BSNQ9UPA5 3926 aa7.37□□□□□ -1.23
SHANK3-201ENST00000262795 ANK3Q12955 4377 aaKnown RBP7.36□□□□□ -1.23
SHANK3-201ENST00000262795 KRTAP3-1Q9BYR8 98 aa7.35□□□□□ -1.23
SHANK3-201ENST00000262795 MXRA5Q9NR99 2828 aa7.32□□□□□ -1.24
SHANK3-201ENST00000262795 INE1O15225 51 aa7.26□□□□□ -1.25
SHANK3-201ENST00000262795 MT1HL1P0DM35 61 aa7.24□□□□□ -1.25
SHANK3-201ENST00000262795 AKAP9Q99996 3911 aa7.23□□□□□ -1.25
SHANK3-201ENST00000262795 KRTAP10-12P60413 245 aa7.23□□□□□ -1.25
SHANK3-201ENST00000262795 TRRAPQ9Y4A5 3859 aa7.23□□□□□ -1.25
SHANK3-201ENST00000262795 FBN1P35555 2871 aaKnown RBP7.16□□□□□ -1.26
SHANK3-201ENST00000262795 SRRM2Q9UQ35 2752 aaKnown RBP7.14□□□□□ -1.27
SHANK3-201ENST00000262795 CSMD3Q7Z407 3707 aa7.14□□□□□ -1.27
SHANK3-201ENST00000262795 KRTAP10-6P60371 365 aaPredicted RBP7.13□□□□□ -1.27
SHANK3-201ENST00000262795 HUWE1Q7Z6Z7 4374 aaKnown RBP7.11□□□□□ -1.27
SHANK3-201ENST00000262795 KRTAP8-1Q8IUC2 63 aa7.07□□□□□ -1.28
SHANK3-201ENST00000262795 MEGF8Q7Z7M0 2845 aa7.07□□□□□ -1.28
SHANK3-201ENST00000262795 FBN3Q75N90 2809 aa7.05□□□□□ -1.28
SHANK3-201ENST00000262795 ALMS1Q8TCU4 4167 aa7.04□□□□□ -1.28
SHANK3-201ENST00000262795 COL7A1Q02388 2944 aa7.03□□□□□ -1.28
SHANK3-201ENST00000262795 OTOGQ6ZRI0 2925 aa6.96□□□□□ -1.29
SHANK3-201ENST00000262795 KRTAP10-5P60370 271 aa6.88□□□□□ -1.31
SHANK3-201ENST00000262795 LCE3AQ5TA76 89 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms